Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ----------->HVH21                        --------->ANAC58                        --------->ANAC58                       ------->TEIL                      <---------ALFIN1                    --------->ANAC58                    --------->ANAC58                   <------NtERF2                  <---------ATERF1(1)                  ------>NtERF2                 --------->DEAR3(1)                --------->DEAR3(2)                --------->RAP2.3(1)              --------->ANAC58              --------->ANAC46                                                      ---------->DOF2  <-----------RAV1(2)<---------SPL7 ----------->HVH21                              <---------AHL20(2) --------ZAT2 --------->ANAC58    <---------MYB52(1)        --------->ZAT14        --------->AHL20(2) --->PCF5    --------->SPL7--------->WRKY38(1)              <---------ZAT14    <---------RVE1(1) ----PCF2    ------->TEIL<---------At4g35610            <---------------AtSPL8 <---------CCA1(1) ->LBD16    <---------ALFIN1------>NtERF2               <---------------AtSPL3<---------ARR11(3)    < -ANAC58   <---------SPL7--------->At4g35610       <---------YAB1             --------->ARR11(3)  <-- -ANAC58  --------->ANAC58 --------->WRKY12        <---------ANAC58          <------ZmHOX2a(1)    --- -ANAC46  --------->ANAC58<----------CDC5          <---------ANAC58<-----------RAV1(1)           ----   cagcccagatggacgcacgccgacgcacgctgacccgtttgacacctctagttgcgattgagtacagaaatgttgcataggatatttaaagaaatgctat  3803900                                                                                --------->LBD16                                                                               <---------ANAC55(1)                                                                               --------->ANAC55(2)          --------->TOE2(3)                                                    <---------ANAC58       <-----------GT1           ----------->HVH21                    --------->ANAC58   <---------YAB1              <----------DOF2                        --------->ANAC58   <---------AHL20(2)         <---------ANAC58                    --------->ANAC58  <---------AHL20(2)          <---------ANAC58                    --------->ANAC58 ---------YAB1                <---------ANAC46                  --------->CCA1(2)       <---------AHL20(2) -------AHL20(2)         --------->ATHB12              --------->REM1(1)       <---------ANAC46 ------>AHL20(2)    <---------TOE2(2)      --------->At5g28300--------->YAB1   <---------ANAC58  <--- ----->AHL20(2)   --------->TOE2(2)       ----------->GT1  ---------->DOF2  --------->ARR14(2)   ----   ttatttttattacatcaaaacataggtttattgctttgacagtatggtaaatgggcttcaacaaagataagcaaaccacatccgtgttatttatagatta  3804000                                                             <---------ANAC58                                                             <---------O2                                                             --------->TGA1a                                                             <---------TGA1a                                                             <---------ANAC46                                                             <---------ANAC58                                                             ===========================bZIP_DOF                                                             --------->O2                                                       ------->TEIL                                                       <---------ARR14(2)               <-----------GT1                         --------->ARR14(2)            ------->TEIL                      <---------YAB1<---------TOE1(2)   >>>>>>>>>ARR2                            <---------ICU4--------->TOE1(2)                  <xxxxxxx   >>>>>>>>>ARR1                            --------->YAB1--------->TOE2(2)               <---------YAB1 ------ANAC55(2)                           <---------ATHB12------>ZmHOX2a(1) ---------->DOF2--------- ----->ANAC55(2)        <---------YAB1    ------->TEIL<---------CCA1(2) ----------->GT1 --------->ATHB12   cataagattgtatgaatttacatgtgattatagaaaaacacatgaatcatgagtctgtatcctacgtgtgattttagtaaaaagcatggattattagtaa  3804100             --------->AHL20(2)          --------->TOE2(3)          <----------DOF2        <---------YAB1                                                                            <--       --------->ARR11(3)                                                 --------->AHL20(2)     ----  ------->TEIL                                                 <-----------HVH21      ------->TEIL--- xxxxxxxxxxxxxxxxsmallRNA(i2)                    <---------TOE2(3)    --------->AHL20(2)   ---------- -->GT1<---------ARR11(3)        --------->AHL20(2)<------ZmHOX2a(1) --------->AHL20(2) <----------DOF2   aatgcacattatctttaaaatagttgtcttatcgaaaaaatacaaatgttttaggaaaacttacatgtcaaataaaaaaaataacatgaacttttcaaaa  3804200           --------->YAB1           <---------ICU4           <--------HAHB4           --------->ATHB12          <---------ATHB12          --------->ICU4        --------->WOX13(1)      ------------>CBF     --------->ANAC58     --------->ANAC58     --------->ANAC46     --------->AtLEC2              <------------CBF  <-------TEIL                   <------ZmHOX2a(2) -------------AtSPL8             <---------YAB1  ---------->DOF2 ------>DOF2                    --------->ARR11(3)                                                --- ------>DAG2                    <---------ARR11(3)                  ---------->DOF2              ---- ------->AGL3     <------------CBF--------->ATHB12                <---------AHL20(2)  ------------>CBF   aaagtacatgcaatcatttgaattgagagaaacagatcattgtaattttagtaaagaaaatgtattatttaaaagaatatttgaaaaatacaatgtttta  3804300                                            --------->ANAC58                                            <---------ANAC55(2)                                            --------->ANAC46          <---------LBD16                                            --------->ANAC55(2)     --------->ARR14(2)           ====                                            --------->ANAC55(1)     <---------ARR14(2)           ----                                            --------->ANAC58   ----------->GT1                  =====                                         <---------ARR14(2)    <---------MYB46(3)               <----                                 <------MYB83                 <---------AtMYB61                <-----                                 <------MYB46(1)              <---------ANAC46                 ------                                <---------DEAR3(1)            --------->ALFIN1                 ------                                <---------AtMYB61           <---------MYB46(3)  --------->ALFIN1-----                              <-------GAMYB<---------LBD16 <---------DEAR3(1)  ----------------------                             <---------ANAC58              <---------AtMYB61 --------->ALFIN1  <-----                             <---------ANAC46            <---------MYB46(3)  <---------AtMYB61 <-----  ------------>CBF           <---------ANAC58           --------->ALFIN1    ========================= ------>YAB1          --------->AHL20(2) --------->ARR14(2)--------->ALFIN1 <------ZmHOX2a(1)  ------ ------->TBP      ---------->DOF2<---------MYB46(3)     <---------AtMYB61   =========================   taaaaacaatacatgtcaacaaaagtaaatggcgttggtgaagaatacggaagaggcagtggtggtggtgaatacggaggaggtggaagtgtttacagat  3804400                                                       <---------ANAC58                                                       <---------TGA1a                                                       <---------ANAC46                                                       <---------O2                                                       --------->TGA1a                                                  <---------ANAC58                                                  <------MYB46(1)                                                  <---------ANAC58                                                 --------->MYB111(2)                                                 --------->MYB55(2)                                                 <---------DEAR3(1)                                                <---------ANAC46                                                --------->ALFIN1                                 <---------ANAC46<---------MYB46(3)                                 <---------ANAC55(2)   <---------bZIP60(1)                         <---------DEAR3(1)   <---------MYB46(3)                         <---------AtMYB61    --------->MYB55(2) ========================HOX2a_HOX2a         <---------DEAR3(1) -->ZmHOX2a(2)           --------->ALFIN1    --------->ALFIN1 ========================HOX2a_HOX2a       <---------MYB46(3) --ZmHOX2a(2)         <---------DEAR3(1)  --------->ALFIN1 ----ARR11(3)      ----------->HVH21   <-----------RAV1(1)                                   <------- --->ARR11(3)     <------ZmHOX2a(1)    <---------AtMYB61                                     <------- --->ARR14(2)    <---------At4g35610 --------->CCA1(2) <---------ANAC58                      <------- ---->CCA1(2)--------->ANAC58    --------->ANAC55(2)--------->ALFIN1                         <------- ->TaNAC69(2)--------->ANAC58   <---------LBD16 <---------MYB55(1)                       -------->HAHB4 ----ARR14(2)--------->ANAC46 <---------SPL7 <---------AtMYB61                          --------->ICU4 ----AGP1 --------->ARR14(2)<---------------AtSPL3<------MYB83                <---------ARR14(2) ==HOX2a_HOX2a   --------->At4g35610<---------ARR14(2) --------->O2      <---------MYB46(3)  <------- --->AGP1 <---------ARR14(2)<---------ZAT6<---------AtMYB61             <---------AtMYB61<---------ICU4 ===HOX2a_HOX2a<-----------RAV1(2)  --------->ARR14(2)<------NtERF2--------->MYB52(1) --------->YAB1   ctggtgatgctaaatacgcaggagacggtggtgttacggatatggtggtggtgggtgtcgtgagagaaaaaacgatggtggaaacgaataataatgcgtg  3804500                     <---------YAB1                    <-------GAMYB                   <---------MYB46(3)                  <---------ANAC46                  <---------AtMYB61                <---------MYB46(3)               --------->ALFIN1               <---------DEAR3(1)               <---------AtMYB61         <------ZmHOX2a(1)             <------MYB83              --------->ALFIN1             <------MYB46(1)          <------ZmHOX2a(1)                       --------->ZAT2             <---------MYB46(3)     --------->ALFIN1                          <---------ZAT2      <---------ARR14(2)     <---------SPL7     <---------HSFB2a(2)          ------>MYB83           -      --------->ARR14(2)   ----------------->AGL1                            ------>MYB46(1)    ----- --ANAC46   <---------DEAR3(1)<---------MYB52(1)<---------TOE2(3)  --------->ANAC46             ----- --ANAC55(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  --------->ANAC58         <-------- --ANAC55(1)--------->MYB111(2)--------->SPL7<---------ARR14(2) <---------WRKY38(1)         --------- --ANAC58   <---------AtMYB61<---------RAP2.6(3)--------->HSFB2a(2)--------->ANAC58     <-----------TGA1 --ANAC58   --------->ALFIN1<---------ANAC46 --------->ARR14(2) <---------WRKY12        <-----------HVH21   tgataacagatagggtggtggtggttattgccgtaagggaggaggaggttatggaagtttaagtggtaaacgcatcaccaagcttgaattcgtcatctac  3804600                                                                                                  <--                                        --------->YAB1                                          -----                                    <--------HAHB4                                              <----       ----------->GT1              --------->ATHB12                                            <----      --------->DAG2         <---------ICU4                                                     -----     ---------->DOF2         --------->YAB1                                                     -----  --------->LBD16        <---------AHL20(2)                                                    <----- -------------->AGL15   --------->AHL20(2)                                            --------->ANAC55(2) ---->MYB46(3)    ----------->GT1  <---------ATHB12                                   <---------ANAC55(2) ---->REM1(1)     <------MYB83 <---------YAB1                                      ------->TEIL<----- -At4g35610       <------MYB46(1) ------->TEIL                <---------REM1(1) --------->ICU4 ------ >At4g35610 --------->ICU4  <---------ATHB12          <---------ALFIN1--------->ARR11(3) ----------->GT1   aaccctgaaaagtaaaaatttggtgattaaatcatgaatcatttatactctaaaacacactccgatgtagaagaaattgggaatgaatatgtgataaata  3804700   <----------DOF2   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------ANAC58  <---------ANAC58     <---------ANAC58 -------WOX13(1)       <---------ANAC58                                                    --------->HSFB2a(1) --->HAHB4            --------->HSFC1(2)                                                   <---------HSFB2a(1) -----ICU4            --------->At4g35610                                           ----------->GT1 ----ATHB1            <---------HSFC1(2)              --------->ZAT2            --------->AHL20(2) ---->ATHB12      --------->MYB52(2)                  <---------At4g35610    <---------HSFB2a(2) ---->ATHB51    <---------MYB52(1)        <----------DOF2      <xxxxxxxxxxxxxxxxxxsmallRNA(se3) ----AHL20(2)   <xxxxxxxxxxxxxxxxsmallRNA(i)          --------->At4g35610    --------->HSFB2a(2) ----ATHB51    --------->TOE2(3)          <---------DAG2 --------->ZAT18     <---------------AGL15 --->AHL20(2)--------->ICU4         --------->YAB1    <---------ZAT2         --------------->AGL15   attggcttatctgtaatcgttagtagcttccatgagtatcaaaacttttttcttcaagctgcgctaagagagccaatttctataaaatgtgaaaccttct  3804800  Previous    Next  AGI:  At2g10020.1    Description:  unknown protein Range:  from: 3804313    to: 3804513    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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