Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                           ------>ZmHOX2a(2)                                                                                          --------->GLK1(1)                <---------ARR11(3)                                                        <------ZmHOX2a(2)               --------->ZAT2                                                             <---------GLK1(1)              --------->ANAC58                                             <-----------RAV1(2)  <----       ------>ZmHOX2a(1)                         <---------RVE1(1)   <-----------HVH21   <---------ARR11(3)       <---------At4g35610                       <---------CCA1(1)  --------->ALFIN1     --------->ARR11(3)       --------->At4g35610                      <---------ARR11(3)  <---------ANAC46     --------->ARR14(2) --------->AtMYB61                              --------->ARR11(3) <------NtERF2        <------ZmHOX2a(1) <---------ALFIN1       <---------ANAC58       <------ZmHOX2a(1) <---------DEAR3(1)   <---------TOE2(3) ----->TEIL   --------->ANAC58                ----------->GT1 --------->MYB46(2)    ---------->DOF2 --->DOF2 ------>NtERF2 <---------ANAC58   ---------->DOF2<---------YAB1----------->HVH21<---------ARR14(2)   gcacctctcctctgccaagctctctgtcttggttaatggttatccaaaaggatatttctcatgttaggcggtgtgagacagggggataaaggatcccccg  3385900                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                 ----                   <---------ARR11(3)                                                            ----              --------->LBD16                        --------->ZAT2                              <---             <---------ANAC46             --------->LBD16                                        ----             <---------ANAC58            <---------LBD16                                         <---             <---------ANAC55(2)       --------->MYB52(1)                                        <---             <---------ANAC58        <---------SPL7  ----------->RAV1(2)                     -------- ------MYB52(1)    --------->ARR11(3)----------->HVH21                            <------------------ ---GAMYB   <---------LBD16  <---------LBD16         --------->At4g35610   <---------At5g28300   <---   ttgttattttgtattgcggaagatgtcttatcacggggtcttaccgggcttaatcacctgggcattctttcttcaattaccgagacctgtacatacaaag  3386000                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              -------      --------->At4g35610                                                                     -------      <---------At4g35610            <-----------GT1                                          -------      <---------ZAT2              <----------DOF2                                             -------      --------->ZAT2             ------>ZmHOX2a(2)                                            -------      <------NtERF2             <---------RVE1(1)                                            ------>NtERF2  --------->ANAC46              <------ZmHOX2a(2)                                            <------- ---->ZmHOX2a(2)               <---------AGP1                                               <-------- ------>CCA1(2)                <---------ARR14(2)                                          ------>NtERF2 ----ZmHOX2a(2)                --------->AGP1                                              --------->LBD16 ----->AGP1                    --------->ARR14(2)                                         <---------ANAC58 ----->ARR14(2)                --------->ARR11(3)                                       --------->MYB52(1) --------ARR10                 <---------ARR11(3)                                       --------->ZAT2 ----->ARR11(3)               <---------At4g35610                                       <---------ZAT2 ------AGP1                   <---------CCA1(2)                                      <---------ANAC58 ------ARR14(2)              ----------->ARR10      <-----------TBP            ------>ZmHOX2a(2)<---- -->DOF2                  <-----------HVH21       <---------------AGL15    <---------YAB1 <---------ANAC58 ---WRI1             <---------TOE2(3)       --------->TOE1(3)        <----------DOF2----------->RAV1(2) ------ARR11(3)     --------->MYB52(1)       --------->TOE2(3)     <-----------GT1   <---------ANAC58   atctaggcagctcatcttcttctaacgaagtcagatctttttccataccataacatatatagaatcgattttcttttctgatcgctagcctgccgggccg  3386100  --------->LBD16  ------>NtERF2 --------->LBD16 --------->ANAC46 ---------LBD16 ------NtERF2 --------ATERF1(1)                                                                          --------- ---->NtERF2                                                                                --------- ------>DEAR3(1)                                                                           <---------MYB55(2) ------>RAP2.3(3)                                                                          --------->MYB46(3) ------>PCF2                                                                              -------->P -------ALFIN1                                                                            ------>MYB46(1) ---NtERF2                                                                              --------->MYB46(3) ----->ATERF1(1)                                                                        <---------MYB111(1) ------ALFIN1                                                                           ------->GAMYB -----ATERF1(1)                                                                         --------->AtMYB61 ---->ATERF1(1)                                                                        <---------MYB55(2) ---->ABI4(1)                                                                          <---------MYB52(2) ->NtERF2                                                                              --------->MYB46(3) --->RAP2.3(2)                                                                        --------->ANAC58 ----ATERF1(1)                                                                        --------->ANAC46 --->RAP2.6(2)                                                                       ------->GAMYB --->RAP2.3(3)                                                                      <---------MYB111(2) --->DEAR3(1)                                                                       <---------MYB55(2) ----ATERF1(2)                                                                      --------->MYB46(3) --->ATERF1(2)                                                                   <---------WRKY12 -->ATERF1(1)                                                                    <---------WRKY45 -->SPL7                                                                         <---------WRKY38(1) -->DEAR4(2)                                                                    --------->WRKY18(1) -->RAP2.3(1)                                   <----------DOF2               <------MYB83------>MYB83 -->DEAR3(2)                                    <---------DAG2                <------MYB46(1) --ATERF1(1)    --------->WOX13(1)           ------>NtERF2<<<<<<<<<MYB2   <-----------RAV1(1)     <-- -PCF5<------ZmHOX2a(2)          --------->GLK1(1)   <---------ANAC58     <---------MYB46(3)------->GAMYB --NtERF2     ------------>CBF   <---------GLK1(1)   <---------ANAC58  <----------DOF2--------->ANAC58   cccccgcgatcaaactatcaatctcataagagaagaaatctctatgcctcctttttcttggttttctcccatgcttttgttggtcaacaaccaaccacaa  3386200                                                         --------->YAB1             <---------ICU4                                                         <--------HAHB4             --------->YAB1                                                         <---------ICU4            <---------ATHB12                                     --------->ALFIN1   <---------ATHB12   --------->AHL20(2)                                   <---------ANAC46     --------->ICU4     <---------AHL20(2)                              --------->MYB52(1)  <---------ANAC46        <---------ATHB12       --------->ARR11(3)    ----------->HVH21 --------->HSFB2a(2)      --------->WOX13(1) >AtMYB61            ------>ZmHOX2a(1)         <---------HSFB2a(2)    ------------>CBF       -------- >TOE2(3)            --------->HSFB2a(2) --------->At4g35610          <---------ATHB12  ------------- --------DOF2        <---------HSFB2a(2) <---------At4g35610   xxxxxxxxxxxxxxxxx>smallRNA(si3)  -----   ctttctatagttcttcactactcctagagacttgacggagtgaagctgtctggagggaatcattttgttgaaatcaattaatctaatcatgcctcaactg  3386300                                                                        <--------ATHB1                                               <-----------GT1          --------->ATHB12     <-----------GT1                         <----------DOF2            --------->YAB1           ---- ->At4g35610                         <----------DOF2                   <---------ATHB51          <--- ---->AGL1                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ATHB12        <----- ------>GT1     <-----------GT1     <---------DAG2<----------DOF2      --------->ICU4         <------ZmHOX2a(2)   gataaattcacttatttttcacaattcttctggttatgccttttcttctttactttctatattttcatatgcaatgatggagatggagtacttgggatca  3386400                                                                                ------>ZmHOX2a(2)                      ------>MYB83                                             <------ZmHOX2a(2)                      ------>MYB46(1)                                          --------->GLK1(1)                     --------->MYB52(1)                    <------ZmHOX2a(1)   <---------GLK1(1)              --------->ANAC58                             ============================HOX2a_HOX2a              --------->ANAC55(2)   <---------LBD16        ===========================HOX2a_HOX2a              --------->ANAC46      --------->LBD16      --------->ANAC58     <---------ARR14(3)              --------->ANAC58  --------->ANAC46   --------->LBD16            --------->ARR14(3)             <---------LBD16<-----------HVH21     --------->HSFB2a(2)         <---------AGP1            --------->MYB52(1)  <---------ALFIN1------>MYB83                  --------->ARR11(3)         --------->ZAT6    <----------DOF2      ------>MYB46(1)               <---------ARR14(2)  --------->GLK1(1)--------->DEAR3(2)         --------->AtMYB61  --------->MYB52(1) ----->At4g35610   --------->MYB46(3)--------->LBD16     --------->ANAC58     --------->ARR14(2) ------At4g35610 <---------ARR14(2)<---------LBD16--------->ANAC46            <---------ARR11(3)   xx ------RAV1(2)<---------ANAC55(2) <---------LBD16<---------LBD16 ----------->RAV1(1)    ---------->DOF2   gcagaattctaaaactacggaaccaactgctttcacaccgggggaagaccatccggagcaaggaccccaacagtttggaagatctcttgagaaagggttt  3386500                     --------->ANAC58                     --------->ANAC46                    --------->ZAT18                    ------->TEIL                 <---------ANAC46          --------->DAG2             ------>ZmHOX2a(1)                   <---------REM1(1)    <----------ID1         --------->ARR14(2)                   <---------ATHB12<-----------------AG            -------         ------->TEIL--------->ANAC58  --------->ARR14(2)   <---------ETT(2)               xxxxxxxxxx         <---------ARR14(2)          <---------HSFC1(2)    --------->ATERF1(1)   <------ZmHOX2a(1)        <---------CCA1(2)            --------->HSFC1(2)    <------NtERF2  ---------->DOF2 <----------DOF2       xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)----------------->AGL1  --------->ATHB12==================== xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------ARR14(2) <---------ATERF1(1)   ----------->GT1 -----   tagcactggtgtatcctatatgtacgctagtttattcgaagtatcccaatggtgtaaggccgtcgacttattgggaaaaaggaggaaaatcactttgatc  3386600                                                                                                xxxxx                                                                                           ==========                                                                                           <------ZmHOX2a(2)                                                                                       --------->ALFIN1                                                      --------->ARR11(3)             <------MYB83                                                  <---------AHL20(2)                 <------MYB46(1)        xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <---------AHL20(2)      ------>ZmHOX2a(1)   ==========     <---------ANAC46                     --------->AHL20(1)      ================================HOX2a_HOX2a    <---------LBD16                 --------->ANAC58  --------->AHL20(1)        --------->HSFB2a(2) -->ARR11(3)                      ---------->DOF2--------->AHL20(2)    ===========================HOX2a_HOX2a xxxxxxxxxxxxx>smallRNA(se3)<------ZmHOX2a(1) --------->AHL20(2)  ------>ZmHOX2a(1) <---------AtMYB61 ==HOX2a_HOX2a          <---------O2--------->ANAC58  <---------AHL20(2)        <---------HSFB2a(2) ->ZmHOX2a(2) xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------AHL20(1) xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)   tcttgtttcggagaaataagtggctcacgaggaatggaaagaaacatattatataatatatcgaagtcctctccttcaaatactggaaggtggatcactt  3386700                                                                                              -------                                                                                             --------                                                                                          <------MYB83                                                             <---------GLK1(2)            <------MYB46(1)                                                            -------->HAHB4               --------->MYB46(2)                                                           --------->ICU4                --------->MYB111(2)          <------ZmHOX2a(1)                                <---------YAB1                --------->MYB59 <------ZmHOX2a(1)                                  --------->YAB1                       --------->MYB111(1) xxxxxxxxxxxxxxxxxx>smallRNA(le3)             --------->ANAC58                          <---------MYB55(1) ================HOX2a_HOX2a                  --------->ANAC58   <----------DOF2        <--------P =======HOX2a_HOX2a   --------->YAB1  <---------AtLEC2 --------->AHL20(2)              <---------MYB52(1)   gtaggaattgtaggaatgacataatgctaatccatgttgtacatggccaaggaagcataaaatgattctttcattctatagatacctctggtaggtaaag  3386800  Previous    Next  AGI:  At2g07707.1    Description:  Identical to ATP synthase protein YMF19 (YMF19) [Arabidopsis Thaliana] (GB:P93303;GB:Q4PL89); similar to Putative ATP synthase protein YMF19 (Mitochondrial protein YMF19) (GB:Q03152); contains InterPro domain Protein of unknown function DUF1082, plant mitochondria (InterPro:IPR009455); contains InterPro domain ATPase, F0 complex, subunit 8, mitochondrial, plant; (InterPro:IPR003319) Range:  from: 3386289    to: 3386765    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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