Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <------NtERF2                            <---------DEAR3(2)                           <---------DEAR3(1)                          --------->ATERF1(1)                          <---------ORA47(1)                         <-----------HVH21                       --------->ALFIN1                      <-------PIF4                      ------->PIF4                      ------->MYC3                      <-------PIF5                      ------->PIF5                                 --------->LBD16                      <-------MYC3                                 ------>NtERF2                      <-------MYC4                                --------->ANAC58                      ------->MYC4                                --------->ANAC58                      <-------MYC2                                --------->ANAC46                      ------->MYC2                              --------->CCA1(2)                     ==========================bZIP_DOF         --------->ARR14(1)                     ==========================bZIP_DOF         <------ZmHOX2a(2)                     <---------ANAC55(2)                       --------->AGP1                     --------->ANAC55(2)                       --------->ARR11(1)                     <---------O2                              <---------ARR14(2)                     --------->TGA1a                           --------->ARR14(2)                     <---------TGA1a    --------->ARR11(3)     <---------ARR11(3)                     --------->O2--------->At4g35610           --------->ARR11(3)                    ------------>OsbHLH66             --------->HSFB2a(2)                 <xxxxxxxxxx                <---------HSFB2a(2)     <---------ARR11(3)   ----------->ARR10           --------->ZAT2                --------->HSFB2a(2) ---------->DOF2   >>>>>>>ZML2------>ZmHOX2a(2)<----------DOF2              ----------->RAV1(2)<---------STY1(2)    <---------HSFB2a(2)        <---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<------ZmHOX2a(2) ---------->DOF2       <---------ANAC58  <-   caatgccagtataaacttctggcacgtggtcggctagctaaagatcagtttcggttctaggcaaagatccgccaatagcagtgactttcccagttcccat  3339900                                          <-----------HVH21                                         ------->GAMYB                                        <------------AtMYB77                                      <xxxxxxxxxxxxxxxxsmallRNA(i)           <---------CCA1(2)                                 <------MYB83                    <---------ANAC58                               <---------MYB52(1)                <---------ANAC58                             <-----------RAV1(1)            <---------MYB46(3)<---------ARR11(3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------ANAC58 --------->TOE1(3)                --------->TOE2(3)<------MYB46(1)          <---------ANAC58 --------->TOE2(3)  <------           <---------ATHB12<---------At4g35610            <---------ANAC46 <---------DAG2     ------- xxxxxxxxxxxxxsmallRNA(se3)--------->At4g35610      --------->DAG2     <---------MYB52(1)  ---------- ---------DOF2<---------YAB1 <---------MYB46(3)    ---------->DOF2 ------>NtERF2     ------>ZmHOX2a(1)   tctttattgtccagtcatccttgataaacagctgttggtacaactgtcatcggtaaaggggcttgttgcctccgataccttatcttcctgtatatgacct  3340000                                         <---------ARR14(2)                       <---------MYB46(3)                                         --------->ARR14(2)                       <------MYB46(1)                                   --------->ANAC58                               <------MYB83                            --------->HSFB2a(2)                                  <---------AtMYB61                            <---------HSFB2a(2) <---------ALFIN1                <---------MYB52(1)                            <---------HSFC1(1)<---------ALFIN1                  <--------P      -----   ---------->DOF2          >>>>>>>ZML2  <---------ARR11(3)                <---------ARR11(3)   -----   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <-----------RAV1(1) ---ANAC46                  --------->HSFC1(1)--------->ANAC46         ---------->DOF2 ---------->DOF2 ---->RAV1(2)       <-----------GT1--------->ANAC58                 --------->TOE2(3)--------->ETT(2) ->HVH21          <---------ATHB12--------->ZAT18            <----------ID1--------->ARR11(3)<-------   gtgcctaaagcacattgccaataaactgttctagagcgagcaatatccacacactcccatagaaggccaaacttaaagacctgttggtcgaaagtcgaac  3340100                                                               ---------->DOF2                                                             --------->YAB1                                                            <---------ATHB12                                                   ------>ZmHOX2a(2)                                                 <---------ARR11(3)                                                 --------->ARR14(2)                                                 --------->ARR11(3)                                                 <-----------ARR10                   --------->TOE2(3)             <---------ARR14(2)                 --------->ARR11(3)              --------->ARR14(3)                                --           --------->ZAT18                      <------ZmHOX2a(1)                                  --           <---------ZAT18      --------->ARR11(3)<---------GLK1(1)                                <-         <---------ZAT18        <---------ARR11(3)--------->GLK1(1)                    --------->At4g35610         --------->ZAT18    ---------->DOF2    --------->HSFC1(2)                  <---------ARR14(2) ---->ANAC58     <---------ARR11(3)    ---------->DOF2    --------->WOX13(1)       --------->ARR14(2) ---->ANAC58    <---------CCA1(2)  <----------DOF2<------ZmHOX2a(2)            ------->TEIL    <----- --SPL7 --------->ALFIN1 --------->TOE2(3)     <---------HSFC1(2)             --------->MYB52(1)  <--   gcttccaagagtgggcacatatctcaatctcaaagaactttgaaagagaaggatctccatcaatgaaaagaaggtagtatgaacggatgtgctgtaacca  3340200                                         --------->ATERF1(1)                                     --------->ZAT2                    <------NtERF2             <---------YAB1          <---------At4g35610              --------->ANAC58          <---------ARR14(2)         <---------ZAT2                   --------->ANAC58     --------->ANAC46   --------->ARR14(2)                      ------>ZmHOX2a(1) ------->GLK1(1)        --------->ZAT14 <---------ATERF1(1)   ----------->RAV1(2) ------->ARR14(2)       <---------ZAT14 ------>NtERF2   --------->ANAC58 --------ARR14(2)       <---------ARR14(2) ------>NtERF2--------->ANAC46 ----LBD16--------->ARR14(2)     --------->YAB1    ---------->DOF2  <------ZmHOX2a(1) ----ZmHOX2a(1)    ---------->DOF2   --------->At4g35610--------->ANAC58                          <--   ggattccacccagttacgatagaaagtatactcattcatagctgcctccccttcaaagacgacatcctgaggaggcaattgaagtcgtttaggcttcaat  3340300                                                                    <---------ALFIN1                                                                    --------->AtMYB61                                                                   --------->MYB46(3)                                                              --------->ANAC58                                                              --------->ANAC58             ----------                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                           ------------>CBF     --------->MYB46(2)                                                          --------->ANAC58      --------->MYB111(2)                     <---------GLK1(1)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <------          --------->At4g35610                    <----------DOF2 --------->ANAC46<-------GAMYB<------        <---------GLK1(2)  <----------DOF2   <---------ZAT18 --------->WOX13(1) <---------MYB46(3)       <---------At4g35610 <---------DAG2    --------->ZAT18 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------GT1        --------->GLK1(1)    --------->ALFIN1--------->ANAC58---------->DOF2  ----------   tttctcttcagcatctcaactagaattccctttatgtatggagagaggggactttgtctccagcaatccaccactctaaaggtagttgagacgatgacgg  3340400                                                                                             --------                                                                                             --------                                                                                            <------NtERF2                                                                                           ------>NtERF2                                                                                          --------->ANAC46                                                                                          --------->ANAC58                                                                                          <------NtERF2                                                                                          --------->ANAC58                                                                    --------->LBD16      ------>NtERF2                                                                   --------->ANAC58      --------->ZAT18                                                                   --------->ANAC46     <---------ANAC58                 ------>ZmHOX2a(1)                                 --------->LBD16      <---------ANAC58        <---------AHL20(2)                      <---------WOX13(1) --------->ANAC58  --------->DAG2        --------->ARR11(3)                     <------------CBF   <---------LBD16   ---------->DOF2        <---------AHL20(1)                    --------->ATHB12 <---------ALFIN1  ----------->HVH21        --------->AHL20(1)                   <---------YAB1   ----------->HVH21--------->At4g35610 ->TGA1 --------->AHL20(2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  ====================== ---ANAC46<------------CBF       <---------ANAC58           ----------------->AGL1 ---------->DOF2 ---bZIP60(2)    ------------>CBF<---------ANAC46   <---------TOE1(3)          ----------->RAV1(2) ->HVH21<---------ARR11(3)       <---------ANAC58   <---------TOE2(3)        <---------ALFIN1<-------   gggtttagaatatattgtcctcaatctagtccatttcttggacacatttgattgaaggtttgccctcacccggaaaccagcacctgaaaggcgcgccaca  3340500                              <---------ZAT18                              --------->ZAT14                   ------->GAMYB                   --------->ZAT18                   <---------ZAT18                  --------->ANAC58                                                           <-------   ---------->DOF2--------->ANAC58   --------->GLK1(2)            <---------ZAT18            ------>ZmHOX2a(1) --->RAV1(1)    <-----------GT1     <---------GLK1(2)     --------->AHL20(2)       <----------ID1 ->DEAR3(1)  --------->YAB1   --------->ZAT18           ----------->GT1       <------------CBF ====RAV------------>CBF--------->YAB1                 --------->DAG2   ---------->DOF2  --------->ARR14(2) --ALFIN1  <------------CBF   <---------ZAT14         ---------->DOF2<----------DOF2     <---------ARR14(2)   gtattcaaagaacaattgtaacgcactcatagtgcacagattccaagtgaagaccgaaaagttaatagtgcctttaaagagattggagacaaatcctttt  3340600                                                                           --------->ATHB12                                                                          <---------YAB1                                                                       --------->LBD16                                                                      --------->ANAC55(2)                                                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       --------->MYB59<---------ANAC46                     --------->ANAC58            ------->MYC3         <---------ANAC55(2)                     --------->ANAC58            <-------MYC3 --------->ANAC46                 <-----             --------->SPL7                      <-------MYC2 --------->ANAC58               --------           <---------SPL7                        ------->MYC2 --------->ANAC58               --------        <---------ANAC58                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <XXXXXXXX ---DOF2<---------ANAC58             --------->ALFIN1<--------P      <---------LBD16     --------->YAB1   gaagcgatttgctcgtacggggcaagacccatactaagagaggggagggaacgtggtaaggtccaagtaatcccgtatgatttcttagctatagtaagca  3340700                                                                                                  ---                                                                              <----------DOF2    ----      ---------->DOF2                                                        <---------ANAC58   ----- ----ICU4                             ---------->DOF2                  --------->GLK1(2)    <-------- ->ANAC58                     <---------GLK1(1)                --------->At4g35610         <---------ANAC58 ->ANAC58                     --------->GLK1(1)           ----------->HVH21  <---------ANAC58   <---- XXXXXXXXXXXXMIR846          <---------GLK1(2)------>ZmHOX2a(1)<---------At4g35610         <---------ANAC58   tttcaattcaaagaaggaatcactaagcacagatttcttctaaagttcctaggggtttctctcacagctaaacattctggctttgttgtaagtgctttcc  3340800  Previous    Next  AGI:  At2g07691.1    Description:  Identical to Uncharacterized mitochondrial protein AtMg01310 [Arabidopsis Thaliana] (GB:P92562;GB:Q1ZXV6;GB:Q8S894); similar to unnamed protein product [Vitis vinifera] (GB:CAO46823.1) Range:  from: 3339904    to: 3340314    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g07692.1    Description:  Identical to Uncharacterized mitochondrial protein AtMg01300 [Arabidopsis Thaliana] (GB:P92561;GB:Q1ZXV7;GB:Q8S893) Range:  from: 3340703    to: 3341541    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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