Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->ANAC46                                                                              ------->GAMYB                                                                             --------->MYB46(3)                                                                             --------->DEAR3(2)                                                                           <---------ALFIN1                                                                          <---------MYB55(2)                                                                          --------->MYB46(3)                                                                      <---------ANAC58                                                                     <------NtERF2                                                                     <---------ATERF1(1)                                                                    ------>NtERF2                                                                    <---------ZAT18                                                                    --------->ABI4(2)                         --------->YAB1                           <---------MYB52(1)                         <---------ICU4                        <---------LBD16--------->DEAR3(1)            <---------WOX13(1)                               --------->ARR14(2)          --------->ATHB12    --------->At4g35610            --------->GLK1(2)--------->RAP2.6(2)      ------->TEIL       --------->ATHB12                    <---------ARR14(2)------>NtERF2 --------HSFB2a(2)       -------->HAHB4                     --------->WOX13(1)--------->DREB2C(2) ---->ZmHOX2a(1)        --------->ICU4                <---------ANAC58--------->ATERF1(1) ------->HSFB2a(2)      <---------ATHB12              <---------ANAC58<---------ANAC58   xxxxxxxxxxxx --------->WRI1        <---------TOE2(3)         ---------->DOF2 --------->LBD16         ----------->RAV1(1)   cctcgatgaaactgattgtcgagttaatgatgagcaaacatgtgattccaacaaagtcttgccaatccggtggcctcccaccgccatttgccaacacaat  3173600             <------NtERF2             --------->HSFC1(2)             <---------HSFB2a(1)             --------->HSFB2a(1)             <---------HSFC1(2)             <---------At4g35610             --------->At4g35610             <---------ZAT2             --------->ZAT2          <------NtERF2          <---------At4g35610          --------->ATERF1(1)         <---------RAP2.3(1)        <---------RAP2.6(2)        <---------RAP2.3(2)       --------->RAP2.6(3)       <---------LBD16     <---------WOX13(1)                   --------->ANAC46   --------->ATHB12                  <---------TCP20   <---------ICU4                  --------->HSFB2a(1)  <---------YAB1                   <---------HSFB2a(1)    <----------DOF2  --------->ICU4                   --------->HSFC1(2)  <---------ARR11(3)                     <------ xxxxxxxxxxx>smallRNA(si3)   ---------->DOF2           --------->ARR11(3)                     <------   ggccatgattgcggcagcttccatcacccatgaaagagggttccacataaaccctaagaactttagaaatttgttctctaccttctcttctagtttgttt  3173700                                                      <---------HSFB2a(1)                                                      --------->HSFB2a(1)                     -------                                                --------->LBD16                         <---------HSFC1(2)                                                <---------LBD16                         --------->HSFB2a(1)                                             ------>MYB46(1)                            --------->HSFC1(2)                                             -------->P                                 <---------HSFB2a(1)                                             ------>MYB83      <-----------RAV1(1)    <---------GLK1(2)                                           --------->AtMYB61 --------->At4g35610    --------->LBD16                                          <---------HSFB2a(1)<---------ZAT2       <---------LBD16                                          --------->HSFB2a(1)<---------At4g35610<---------ALFIN1-----                              --------->At4g35610--------->LBD16               --------->MYB46(3) ---ANAC58                    ------>ZmHOX2a(1)<---------LBD16 <---------MYB46(3)--------->MYB52(1) ---ANAC58                    <---------At4g35610--------->ANAC46      <---------ALFIN1<---------KAN4(2)   gccccaaatatttgtagtctgtttcttccttcctctgaagacaaaccttcccgggaacatttcagctgttggaacacttcgtccaccggaattttctcct  3173800                      --------->SPL7                      <---------TOE2(2)                    <---------SPL7                   <---------ANAC58                   <---------ANAC46                       ----------->GT1                   <---------ANAC58                      <---------TOE2(3)                         <-           --------->YAB1                                --------->DAG2                 --------->AHL20(2)          <-------TEIL<---------TOE1(2)               <---------AHL20(2)         ----------->RAV1(1)      <-------TEIL<---------------AtSPL3             --------->YAB1             --------->MYB46(3) == ---->RAV1(2)     --------------->AtSPL3            <---------YAB1              --------->REM1(1) --- ->ZmHOX2a(1)     --------------->AtSPL8 ----------->GT1 <---------TOE1(3)    ----------->RAV1(1) <--   gtaatacatacattcatggtttcgtacgttttatcaacaattcatgttaaaactattataaggtaaaatgtgtgttttagcaacaacaaattacttacaa  3173900                                                <---------YAB1                                              --------->YAB1                                             --------->ICU4                                        --------->RAP2.6(2)                                      <---------At4g35610                                      --------->ZAT2         <---------YAB1              <----------DOF2         --------->At4g35610  <---------ICU4           ------>ZmHOX2a(1)     <---------GLK1(1)         --------->YAB1           <---------ZAT2 -----ZmHOX2a(2)                 --------->GLK1(1)        <---------ATHB12          --------->ZAT2 =================HOX2a_HOX2a    --------->CCA1(2)        --------->ICU4           ------->TEIL ------>ARR11(3)                --------->ARR11(3)   --------->YAB1             --------->ANAC46 -------ARR11(3)                <---------ARR11(3) ------->TEIL               <-----------GT1 <------   gatcaacattctccttctttatttcatcccatgagatatcagcagccatgatgaatcacaatgatgagaaacaacaattttcacgaagctcggcttcttt  3174000                                                                               <---------ICU4                                                                   --------->YAB1                                                             ----------->GT1  --------->ICU4           <-----------GT1                                  --------->DAG2    <---------YAB1        -        --------->AHL20(2)       <------------CBF           <---------------AtSPL8   <----------DOF2< ----------->GT1           <----------DOF2            ----------->GT1 --------->MYB52(1)          <-- ----DOF2*TSS      ------>ZmHOX2a(1)     ---------->DOF2  ---------->DOF2  <---------YAB1         <--   agacagaaaattaaaactctccttattctcttttgaattgtcttaaagaacaagaagagtaaaaggtaaaaataactgtgattatttctttagttttgtg  3174100                                              <---------ANAC58            ---------->DOF2                   <---------ANAC58            =======================================bZIP_DOF        <----------ID1                   --------->TGA1a      --------->REM1(2)                  <---------TGA1a     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------O2   <---------ANAC58                      --------->O2   <---------ANAC46               --------->ZAT14        <---------ARR14(2)   <---------ANAC58              <----------DOF2         --------->ARR14(2)            <---------ANAC46 <---------ANAC46                <---------DAG2   <---------ANAC58           --------->TOE1(3) -------->ALFIN1                 ==================bZIP_DOF                  --------->TOE2(3) ---------AtMYB61               --------->ANAC46  <---------ANAC58         <---------ARR11(3) -------ANAC46              <-----------GT1   <---------ANAC46     <-----------RAV1(1)<---------TOE2(3) -------bZIP60(2)   ----------->GT1  --------->ANAC46    <---------MYB52(1)--------->ARR11(3)   atgtggtgtgaagacaaagaagtggtatatatacactttacacaagtggcttgcatgcggttttgtagtttgtggcagaccttaaactgaggtgttttga  3174200                                                          <-----------RAV1(1)                                                         <---------TOE2(3)                                                    --------->ATHB51                                             <----------DOF2                                            <---------ANAC58                            ----------->GT1                                            <---------ANAC58                   --------->AHL20(2)                                       <----------DOF2 <---------AHL20(2)     <---------AHL20(2)                                  <----------DOF2   --------->AHL20(2)       --------->AHL20(2)                                 <---------DAG2  --------->TOE2(3)     <-----------GT1----------->GT1   caatgcatatgtgtgtgttttgaactgtttttatgccttttcttttgctttccataatttatgttgttgtttttttcaatttaaaatagggagaaaatag  3174300                                                                             --------->YAB1            --------------->AGL15                                            --------->AHL20(2)            --------->HSFB2a(2)                                              <---------ICU4            <---------------AGL15                                         --------->YAB1            <---------HSFB2a(2)                                          <---------YAB1           <-----------------AGL2                                      --------->YAB1           ----------------->AGL3                               <---------ARR11(3)           ----------------->AGL2                               --------->ARR11(3)           <-----------------AGL3     <---------YAB1           <---------CCA1(2) <---------TOE2(3)                 <---------MYB52(1)        <---------AHL20(2)                   --- <---------TOE1(3)         --------->LBD16                ------->TEIL<---------YAB1              --- --------->MYB59        --------->MYB52(1)------>ZmHOX2a(2)  --------->AHL20(2)                  ----   atttaggtttatttctacaaatagaaaaccggcattcgttatgatccaacaagaagtatgtatttaaatcttttgataataatatcaaataatccgaact  3174400                                                                                                    -                                                                                                    -                                   --------------->AGL15                                            <                                   <---------------AGL15                                            -                              <<<<<<<<<<WRKY43                                                      <                              <<<<<<<<<<WRKY26                                                -------                        --------->ATHB12            --------->ICU4                       --------->YAB1                       --------->AHL20(1)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------AHL20(2)                       <---------YAB1--------->AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<         --------->DAG2<---------AHL20(2)         ---------->DOF2          ------->TEIL--------->AHL20(2) ------>MYB52(1)      --------->AHL20(2)  ----------->GT1    ----------->RAV1(1)  <<<<<<<<<GATA-1   < ----->P---------->DOF2--------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<----------DOF2-------- ----->MYB52(1)<-----------GT1<<<<<<<<<<WRKY38 <---------TOE2(3)          <---------CCA1(2) ---------   taccgaatgaaaaagttttacaaattttattggtcatctataaatagttaagaaaagatgatgcaacaagaagtatgtatctttatctatataataaagt  3174500  Previous    Next  AGI:  At2g07560.1    Description:  AHA6 (ARABIDOPSIS H(+)-ATPASE 6); ATPase. Identical to ATPase 6, plasma membrane-type (AHA6) [Arabidopsis Thaliana] (GB:Q9SH76); similar to AHA8 (ARABIDOPSIS H(+)-ATPASE 8), ATPase [Arabidopsis thaliana] (TAIR:AT3G42640.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to AHA9 (Arabidopsis H(+)-ATPase 9), hydrogen-exporting ATPase, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G80660.1); similar to putative plasma membrane ATPase [Olimarabidopsis pumila] (GB:ABA18090.1); similar to putative plasma membrane ATPase [Arabidopsis arenosa] (GB:ABA18112.1); similar to putative pl Range:  from: 3169969    to: 3174009    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version