Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                  --------->KAN4(2)                                                                                 --------->HSFB2a(1)                                                                                 <---------HSFC1(2)                                                                                 --------->HSFC1(2)                                                                                 <---------HSFB2a(1)             --------->YAB1                                                      <---------KAN4(1)             --------->AHL20(2)                                      --------->GLK1(2)   <---------At4g35610            <---------ATHB12            --------->TOE2(3)           <---------ARR14(2)   --------->At4g35610   ------>MYB83                       <---------TOE2(3)       <---------LBD16    --------->KAN4(1)   ------>MYB46(1)                 <---------AHL20(2)        ----------->RAV1(2)<---------KAN4(2)   <  <---------ALFIN1       --------->YAB1----------->GT1      -------->P        <------ZmHOX2a(1)    <- ---->YAB1--------->WOX13(1)   --------->YAB1 --------->AHL20(2)    <---------GLK1(2)  <-----------RAV1(2)   atacccacttgccaattaaaaaatcaataagactcatattaatgttaaataaacagagctcttacctggagattcttgtaggaacgttctcagatgacat  3094300                                                         --------->WOX13(1)                                                 <---------ANAC55(2)                                                 ----------->GT1                                               --------->YAB1                                              <---------ATHB12                                           --------->MYB46(3)                                      --------->ANAC46  --------->AHL20(2)                       <xxx                                  ------>ZmHOX2a(1)    --------->AHL20(2)                     <------ ->HVH21                 <---------At4g35610--------->YAB1  --------->YAB1                    <------ -----------GT1          --------->At4g35610--------->WOX13(1)--------->At4g35610      <-----------RAV1(1) --------YAB1        <-----------RAV1(1)--------->ANAC46<---------AHL20(2)            <---------TOE2(3)   tataactacatgtatacttctaaatgctgctgattcctatacacaacaatcatgtaaattaatcagaagaaaataaaactgaagggtttatgttgggctt  3094400                 --------->AHL20(1)                 <---------AHL20(1)                 --------->AHL20(2)              --------->YAB1     --------->At4g35610     <---------At4g35610                                                                      <------  ---------->DOF2<---------AHL20(2)                     --------->ICU4                  --------->ARR11(3) xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)              <---------YAB1                           <---------ARR11(3) ---ANAC58   <---------YAB1             <---------ARR11(3)                           --------->DAG2 ---ANAC58 --------->YAB1   --------->ETT(2)--------->AHL20(2)                      ---------->DOF2   gtccaaaagctgaccataataaaatggacatcgacagtccatgatttttaatattgaacttatgaagtattcaacttatgtttttaaaaagttcttaata  3094500                              <-----------HVH21                            <-------MYC2                            ------->MYC2                            <-------MYC3                            ------->MYC3                           <---------O2                           --------->TGA1a                           --------->O2                           <---------ANAC55(2)                           <---------ANAC55(1)                           <---------ANAC46                           --------->ANAC55(2)                           <---------ANAC58                           <---------bZIP60(2)                           <---------TGA1a                           <---------ANAC58                        ----------->HVH21                       <-----------HVH21                                                --------->GLK1(1)                      --------->TGA2(1)                                                 <---------GLK1(1)                      --------->bZIP60(1)       --------->YAB1                         <---------ARR11(3)                      <---------bZIP60(1)       --------->AHL20(2)                   <---------YAB1   --------->ICU4   <---------ICU4   ----------->GT1                               --------->YAB1 ---YAB1           --------->ICU4    <---------ZAT6                      --------->AHL20(2)         <   ttgaacttatgaagtattgaaattatgtcacgtgtcattgtgttaaacaattaaaacttaagtatgaagttttgaataaatgtattcatgatatccatgt  3094600                               <---------TOE2(3)<---------ANAC46                      ------>MYB83                          <-----------GT1       <------MYB83                         ----------->RAV1(1) <---------YAB1          --------->AHL20(2)     <------MYB46(1)                     --------->AtMYB61 ---------AHL20(2)--------->At4g35610<----------DOF2                 ------>ZmHOX2a(1)------>MYB46(1)   attattttggactcatggacagcccaatttactatggttctttttgaatttggtgtaatttgggtctggtcctatttgggcttagaccaacaatgtccaa  3094700                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                           <---------ARR14(2)                                                                                           ------>MYB83                                                             ------------>CBF            --------->AtMYB61                                   --------->ANAC58         --------->ANAC58            ------------>CBF                                   --------->ANAC58         --------->ANAC58 <------ZmHOX2a(1) ------                          <-----------GT1         --------->ANAC58          <xxxxxxxxxxxxxxxxsmallRNA(i)                         ----------->HVH21        --------->ANAC58        <------ZmHOX2a(1)------>MYB46(1)     <-------GAMYB<---------At4g35610          --------->ANAC46 <------------CBF        --------->MYB46(3)   aaaatggggttgtaatggacagcccatttgacatccctagccatcatcgacgaagcaaaatccagcaattgagagaggaggagttgaagaaccaatcctg  3094800                                                         --------->HSFC1(2)                                                         <---------HSFC1(2)      <---------LBD16                                    --------->HSFB2a(1) ->YAB1                                                  <---------HSFB2a(1) --ICU4                                            <------ZmHOX2a(1)                ----------->GT1 -ATHB12             --------->At4g35610         <---------TOE2(3)     ----------->TGA1 >ZmHOX2a(1)    <---------ZAT6               --------->YAB1          <------ZmHOX2a(1)     --------->YAB1   accataagtccggttttagagtcagtggaacaagagaagtctaacaagaatgaggaagaaatttctgagaaggatgacgaagaagagagtgaataagaag  3094900                                                                                 <-----------GT1                                                        --------->YAB1     --------->TOE2(3)                                                        <---------ICU4  <-----------GT1                                                  ------>ZmHOX2a(1)<---------GLK1(2)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              ---------->DOF2             <------ZmHOX2a(1)  --------->ZAT6<---------DAG2      >>>>>>>>>TBF1                  <---------ANAC46  <---------ATHB12<-----------GT1              -  <---------ZAT14    >>>>>>>>>TBF1----------->HVH21------------>CBF<---------ARR11(3)            ----   agagtgaagaagaagagaaagaagaagaagggaatcgcgacggaggagagtcctccaatgataacactagattttaacctttttaagcccttgtttttca  3095000                                                                                                <----     <---------At4g35610          --------->TOE2(3)  <----------DOF2                            <---- ------>TEIL          <----------DOF2      <----------DOF2                                      <---- ----->AtLEC2<-------TEIL   --------->AtLEC2    <----------DOF2   <---------AtLEC2          xxxxxxxxx   tgcatttagcttagtttcatgtctcttttcatgcattcttagtctcttttctttcctttgcacattttgcattgcattgcattgcatacttgcatttgga  3095100                     <----------DOF2                                                                -       --------->At4g35610                                                        ---------->DOF2   <       <---------At4g35610                                                      =================HOX2a_HOX2a     <-----------RAV1(2)                                                        <------ZmHOX2a(2)   <   <-----------GT1 <-------TEIL                                             <---------TOE1(2)       - -----ANAC58     <---------MYB52(1)                                       <---------LBD16           - -----ANAC58   --------->MYB59                                           <---------ANAC58           < -----ANAC46  <-----------RAV1(2)            <---------HSFB2a(2)         <---------ANAC46        <--- xxxxxxx>smallRNA(i) <---------DAG2          --------->HSFB2a(2)         <---------ANAC58 <------ZmHOX2a(1)   gtgttttacaggtgaatcaggtacttttggactcgacttggaggtttctagcacaagggatagacaaactcgatttcgtgggatcaaaggaaggacttgg  3095200  Previous    Next  AGI:  At2g07440.1    Description:  two-component responsive regulator-related / response regulator protein-related. similar to ATRR3 (RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G41310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42842.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) Range:  from: 3093818    to: 3094747    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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