Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ANAC55(1)             --------->ANAC58             --------->ANAC46             --------->ANAC58            <---------LBD16    --------->TOE1(3)      <-----------GT1          --------->YAB1   --------->ARR14(2)          --------->TOE2(3)         <---------LBD16                       <-----   <---------ARR14(2)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   <------  <---------GLK1(1)    --------->At5g28300              --------->MYB52(1)                   <-------  <---------RVE1(1)   --------->LBD16              --------->GLK1(2)                     --------->ALFIN1  <---------CCA1(1)   ----------->GT1              --------->ARR11(3)                  <---------ANAC46 --------->ARR11(3)  --------->LBD16               <-----------ARR10     --------->ZAT6<---------ANAC58 <---------ARR11(3) <---------LBD16                <---------ARR11(3) <---------ZAT18  <---------O2 ------ZmHOX2a(1)--------->ANAC58        --------->TOE2(3)           <---------MYB52(2)<---------ANAC58 -------TOE2(3)  --------->ANAC58        --------->TOE1(3) --------->LBD16         <---------ARR14(2) -----DOF2 --------->MYB52(1) <<<<<<<<<ARR2 --------->MYB52(1)--------->GLK1(1)    --------->ARR14(2) -ANAC81   <---------ALFIN1   <<<<<<<<<ARR1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------CCA1(2)   taggatatttgccacacggaagcccggtaacaatcttaaactcccttaacgaaaatcttaccggagtcccagcgaacactacccaaatctcgtgggggtt  3011900                                                                               <---------MYB55(2)                                                                               --------->MYB46(3)                                                                              --------->ANAC46                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                 --------->GLK1(2)                        --------->YAB1             <---------DEAR3(2) ---------->DOF2                     --------->YAB1              <---------LBD16 --------->ARR11(3) ---P             ----------->GT1         ------>NtERF2   <---------LBD16   <---------ALFIN1   <----- -GAMYB    <---------ANAC58               --------->HSFB2a(2)    <---------ARR11(3)<---------ATHB12 < --MYB46(3)<---------ANAC58              --------->DEAR3(1) ----------->GT1<---------ZAT18   <-------   gaaatttccaattgcctactcagtaataagagtctgaaactcgccgagaacgccggtttattcggaaaatctaaaagcccacccaatgaattgttgagga  3012000                                                                                               ------                                                                                            ---------                                                                                         ------>ZmHOX2a(1)                               <---------ICU4                                           <---------ALFIN1                               --------->YAB1                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            --------->YAB1                              <----------DOF2--------->ATERF1(1)                         --------->TOE2(3)                        --------->WRKY12    <---------ATERF1(1)                        <---------ANAC58                         --------->DOF5.7(2)  ------>NtERF2 -       <---------YAB1   <---------ANAC58                        ------->MYC3         <---------ARR14(2)  <------ZmHOX2a(1)     ----------->GT1                         <-------MYC3         --------->ARR14(2) -ZmHOX2a(1)            <---------ZAT6           <---------AHL20(2) <-----------GT1 --------->ATERF1(1) ---------TOE2(3)       <---------ANAC46  >>>>>>>>>TAC1 --------------->AtSPL8     <---------ATERF1(1) --TOE2(3)        --------->ETT(2)   ----------->HVH21  <---------------AtSPL8     <---------RAP2.3(1)   tgaaggattactcttgttcgtcgatagcgttaataatcccagacagtgtttttattttgtggtacacgtttaccctttcgccaagcggctcctccccaaa  3012100             <------MYB46(1)             <---------ANAC46             <------MYB83             ----------->GT1            <------MYB46(1)                                       --------->DREB2C(2)            <------MYB83                                          --------->RAP2.6(2)            --------->MYB59                                       --------->ANAC58            <---------MYB46(3)                                    --------->DEAR3(1)         <------NtERF2          <---------MYB52(1)                                      --------->ANAC58          ---------     -------->P                                <---------AHL20(2) --------->ANAC46          ------>NtERF2     --------->MYB52(1)                        --------->AHL20(1) ------->GAMYB            <---------ARR14(2)  <---------ATHB12                             --------->AHL20(2)--------->MYB46(3)      --------->LBD16 --------->ANAC58                             --------->AHL20(2) --------->DEAR3(2)    <---------LBD16 --------->ANAC58                    <<<<<<<ZML2               <<<<<<<ZML2 ---------->DOF2 --------->ARR14(2) ---->DOF2<--------P              <---------HSFB2a(2)          <---------ARR14(2)     -------->P >LBD16  <---------MYB52(1)       --------->HSFB2a(2)          --------->ARR14(2) --------->TOE1(3)-- -------->WOX13(1)                --------->HSFC1(1)--------->ATHB12   --------->O2  --------->MYB52(1)   tgcaatcaaccggttgggtaattcgacagactccatctagaacaaaaaaaaaattgattaaactagaaccgccatgtgaaagaaccctaaccggagccga  3012200                                                                                  ------>NtERF2                                                                               ------>NtERF2                                                                              --------->DEAR3(1)                                                                             --------->RAP2.3(1)                                      --------->DEAR3(1)                     --------->ATERF1(1)                                     --------->RAP2.3(1)                     <------NtERF2                                     <------NtERF2                          <---------ATERF1(1)                                    ------>NtERF2                          --------->ARR14(2)                                   --------->DEAR3(1)                      <---------ARR14(2)                                  <---------ABI4(2)                    --------->ANAC55(2)                                  <------NtERF2                        <---------ANAC55(2) --------->ATHB12                                  <---------At4g35610                 <---------LBD16     <---------YAB1          --------->YAB1      --------->ANAC46     <---------LBD16--------->YAB1  --------->LBD16          <---------ICU4      --------->ANAC58--------->ZAT14     <---------ICU4 --------->DEAR3(1)xx         <---------ATHB12     --------->ANAC58<---------ZAT14    --------->ICU4--------->LBD16    --- >At4g35610     --------->TOE1(3) --------->At4g35610   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <-- ------->YAB1   --------->TOE2(3)<---------ATERF1(1) --------->LBD16 <-----------GT1 <------ZmHOX2a(1)   attagaattcaaacattaccttagaaatagaaacgcagcgccgaagagtttactccggagaagactaattatcacgggctccgccgaggatgatgtttgg  3012300                                         --------->ANAC58                                         --------->ANAC58                                         --------->HSFB2a(1)          ---------->DOF2      <----------DOF2                                     --------->YAB1 xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <---------HSFB2a(1)         --------->ARR11(3)     --------- ------>GLK1(1)           --------->YAB1------->TEIL                 <---------GLK1(2)  --------->ZAT6 -------GLK1(1) <-------TEIL  *TSS   <---------MYB52(2) <---------AtMYB61       ----------->GT1   atatcggaccaaaaaagatgcaactcaatgagactttaaacgaacgctctcaagagttgtggtgactctcagatttttgggagaataaaaacactagtaa  3012400               --------->ANAC46               --------->ANAC58               --------->ANAC58                               <---------AHL20(2)            <--------               --------->O2                         --------->ANAC58                        ---------               <---------O2                     --------->ANAC58                        --------->RVE1(1)      <-------TEIL                              --------->ANAC58                       <---------ARR11(3)     <------ZmHOX2a(2)                          --------->ANAC46                       --------->ARR11(3)    --------->AGP1                         --------->ARR14(2)--------->AHL20(2)        --------->GLK1(2)    --------->ARR11(3)                  --------->DAG2       <---------AHL20(2)    --------->YAB1    <---------ARR14(2)                 ---------->DOF2   --------->ICU4         ------->GAMYB    --------->ARR14(2)              --------->At4g35610 <----------DOF2        --------->MYB46(3)    <---------ARR11(3)           <---------At4g35610--------->ANAC58           <---------MYB52(2) -->GT1 <------------CBF       <-----------GT1 ------>ZmHOX2a(1)        <---------ZAT6<---------GLK1(2)   atataagatccattgagacgcgactcttcatttttagcagataaagttcctcgcaagcctttattaaatgaacagtgttcaacaaacaaaatctctcgaa  3012500                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------          <---------SPL7                                                                      -------          ------>NtERF2                                                                       -------          <---------RAP2.6(3)                                                                <-------         <---------ANAC46                                                                    <-------         <---------ANAC58                                                                    --------         <---------ANAC58                                                                  --------->WOX13(1)   <---------ANAC55(2)                                                              --------->ANAC46   <---------ANAC58                                                               --------->ANAC46   <---------ANAC58                      <-------TEIL                           <-----------GT1 -HSFB2a(2)  ----------->HVH21        --------->ICU4  --------->ATHB12       <---------YAB1--------->YAB1 >HSFB2a(2)----------->RAV1(2)    --------->At5g28300--------->ICU4<---------ARR14(2)     --------->MYB46(3)   agattacgttgccgtctgacacaatactagtctagcggtaatgttcattttcgaaatgatttataggggtataggggtcattatacacatcaacaatcat  3012600     --------->At4g35610    ----------->GT1 ---ICU4                                             --------->YAB1 ->ATHB1                                      --------------->AGL15 -->YAB1                          --------->HSFB2a(1)----------->GT1 ------ATHB5                <---------At5g28300  <---------AHL20(2)   <---------ICU4 --ATHB1                   <-----------GT1    <---------------AGL15   --------->YAB1 -->ATHB51                 <<<<<<<<<GT-2     <-----------------AGL1  --------->ICU4                 < -->ATHB12              <---------ICU4      ------->TEIL             <---------ATHB12              <- --YAB1                 ------>MYB46(1)     <-------TEIL           --------->YAB1                  -- --ATHB12               ------>MYB83     --------->AtLEC2 <-----------GT1     ----------->HVH21  <--- ->ICU4               <---------MYB59   --------------->AtSPL8    <---------YAB1                 <---   tgggaacagttgaaaaatggacgacctaattaccgagtcttccatgtacatataatggtaataccattctaataatgtctatgacattagatgtttgtga  3012700        ----------->GT1  --------->ALFIN1                                                <---------ARR11(3)  <---------ANAC46                                                --------->ARR11(3)           ------ ---------ANAC46                                                <-------TEIL                  ------- --------AtMYB61                                            <---------------AtSPL8           -------- ------->ALFIN1               --------->MYB46(3)            --------------->AtSPL8         <------ZmHOX2a(1) ------ANAC46        ---------->DOF2                    <----------DOF2                  <---------TOE2(3) ------bZIP60(2) <-----------HVH21       <---------AHL20(2) --------------->AtSPL3  <---------AHL20(2)   tgtggtggagttgtaaatgtgtcaaaagttcaacaaatgccatttttttgtctaatagctttgaagtacatcttcgtaactagtttttatttaggaaaag  3012800  Previous    Next  AGI:  At2g07240.1    Description:  cysteine-type peptidase. similar to Ulp1 protease family protein [Brassica oleracea] (GB:ABD64941.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653); contains InterPro domain Region of unknown function DUF1985 (InterPro:IPR015410) Range:  from: 3007099    to: 3012330    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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