Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------ARR11(3)                        --------->ARR11(3)                                                    <xxxxxx                        <---------ARR11(3)                                                <---------WRKY18(1)                       --------->RVE1(1) --------->ARR11(3)                            <---------ICU4                     --------->AHL20(2) <---------CCA1(2)                              ------>ZmHOX2a(2) <---------ZAT6--------->YAB1      <---------AHL20(2)             <---------ZAT6     --------->ARR11(3) ->ANAC58     <---------YAB1------>ZmHOX2a(1)                   --------->YAB1       <---------ARR11(3) ->ANAC58   --------->YAB1  <----------DOF2 <----------DOF2<---------MYB59       --------->YAB1------   attgtgttattgtattatgataaaaaaatccttttattttatatatctttggtttatatggcctaatagtattagatggccaaaaatgatcttgaccatt  2993800                                                                  --------->YAB1                                                                 <---------YAB1                                                              <---------AHL20(2)                                                              <---------AHL20(1)                                                              --------->AHL20(1)                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                    <---------AHL20(2)                                                   --------->AHL20(1)                                                 <---------AHL20(1)                        <---------DAG2                                                 --------->AHL20(1)                     <---------AHL20(2)                    --------->ATHB12   <---------ANAC55(2)    --------->AHL20(2)        <-----------GT1  <-------TEIL    <---------MYB52(1)  xxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <---------ZAT6 xxxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->AHL20(2)<---------AHL20(1)      <---------YAB1  <--------- --->AtLEC2     <---------MYB46(3)   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->AHL20(2)    -----   caaatgcattgttatgagccgttgattagatggcataaaataagtgtctaatatatatttatattttattatagattaatatagtcttatttactttatc  2993900                                                                             --------->ARR11(3)                                                  <---------YAB1             <---------ARR11(3)                         <---------ARR11(3)  --------->ARR11(3)              <---------AHL20(1)                  --------->AHL20(2)      --------->YAB1                     --------->AHL20(1)                  <---------AHL20(2)      --------->AHL20(2)            ------->GAMYB                 --------->AHL20(1) --------->ANAC46                  <---------At4g35610                 <---------AHL20(2) <---------ANAC55(2)               --------->At4g35610   ---------                 <---------AHL20(1) --------->ANAC58         <---------GLK1(2) <---------AHL20(1)----            --------->AHL20(2)      --------->ANAC55(2)      <---------ARR11(3)--------->ARR11(3)<--- -DOF2  ----------->GT1  --------->ARR11(3)  <---------ARR11(3)      <xxxxxxxxxxxxxxxxsmallRNA(i)---- ---->TOE2(3)    --------->AHL20(2) --------->ANAC58         --------->ARR11(3)--------->AHL20(1)<---   ttattacatagagtttaaatttaattagatattgactcacgcattaatatctataattccatagattttggcaactgaaaatattttgaatcaatagaaa  2994000        --------->ANAC58                  <----------DOF2        --------->ANAC55(1)        --------->TGA2(2)        --------->ANAC46          <-----------TGA1 -->GT1 --------->ANAC58         --------->ANAC58 ----->AHL20(1)                  --------->ANAC58                                                   < ------AHL20(1)                  --------->ANAC46 <-----------GT1                            <------- ----->ARR11(3)                 <-----------STF1 <-----------GT1                        --------->GLK1(1) ------ARR11(3)           <-----------GT1 <---------DAG2          ------>ZmHOX2a(1)<-------TEIL     -   atattctaacacgctatactttggaaaataacaaaacgtcatcacttttttttaactcacaataaatcctattggtttgaaacgattcgtatttcctttg  2994100              <---------ICU4                   ----------->TBP              --------->YAB1           --------->LBD16              -------->ATHB1          <---------ANAC55(1)              --------->ATHB12        <---------ANAC55(2)              <--------ATHB1          --------->ANAC55(2)             --------->ICU4           <---------ANAC58             <---------ATHB12         <---------ANAC46           --------->WOX13(1)         <---------ANAC58          ------------>ATHB5     <---------HSFB2a(1)       ------->GAMYB             --------->HSFB2a(1)      <------------AtMYB77      --------->ARR11(3)                  --------->AHL20(2)    <---------CCA1(2)     --------->At4g35610        <---------ARR11(3)                  <---------AHL20(2)  <---------ANAC58 ---------bZIP60(1)            --------->GLK1(1)           <-----------GT1       --------->TOE2(3) ---DOF2<-----------HVH21      <---------GLK1(1)        <---------ICU4   <-------TEIL   <---------ANAC58 -------->REM1(1)      <---------AHL20(2)    ----------->TBP --------->ZAT6--------->TOE2(3)   cgacatcaactgtcaatcattgtattttttgagaaatcttccgtgttatatataaaactaattacactaaaaaaattcattaatctaaatgcttatcttt  2994200                                                                                                  ---                                                                                                =====                                                                                               <-----                                     --------->ARR14(2)                                        ======                                     <---------ARR14(2)                                       <------                           --------->CCA1(2)        --------->ATHB12                          -------                          --------->ARR14(2)   --------->ZAT18                                -------                          --------->ARR11(3) --------->At4g35610                 <------MYB46(1)-----                          <---------ARR14(2) --------->ZAT2                      <------MYB83 <------                          <---------ARR11(3)--------->ANAC58           -------->ZAP1          -------                          --------->ARR11(1)--------->ANAC58         <---------WRKY18(1)      <------                 <----------DOF2   *TSS --------->ANAC46            ----------->HVH21       ---------   caaaacaaaaaaaaacttccttttgaaagatatggagcctatccacaagctcactgatttgaatgtaaacttgaccgaatggaaggtttatgtgaagatc  2994300           --------->HSFC1(2)           <---------HSFC1(2)           <---------HSFB2a(1)      <---------HSFB2a(2)      --------->HSFB2a(2) --->ZmHOX2a(1) =======================HOX2a_HOX2a -ZmHOX2a(2) =======================HOX2a_HOX2a                    <---------WOX13(1) ---ARR14(2)                                           <--------P -->ARR11(3)                                          <-------GAMYB         <----------DOF2 -->ARR14(3)               <---------ICU4            <---------MYB46(3)     ------>ZmHOX2a(1) ->ZmHOX2a(2)            --------->GLK1(2)          <---------YAB1        ------>ZmHOX2a(2) ---ARR14(3)        ---------->DOF2           <---------YAB1             <------ZmHOX2a(2) -->ARR14(2)     ------>ZmHOX2a(1)            --------->ICU4            <---------ARR14(2) ---ARR11(3)--------->YAB1 --------->YAB1   --------->YAB1    ---------->DOF2      <---------AHL20(2) -->ARR10  --------->HSFB2a(1)     ----------->GT1  <---------TOE2(3)   --------->ARR14(2)<-------TEIL   ctatctatctggaatcatcctccaaagaatcatggtgaagttacaaccatgattttggttgattaaaaggtttggatccttttattttttggttcattta  2994400                                                                       <---------LBD16             --                                                                      ----------->RAV1(2)          --               --------->ATHB12             ---------->DOF2         <-----------GT1           -------              <---------YAB1            <----------DOF2         <----------DOF2               -------            <-----------GT1       <-----------GT1          <----------DOF2 <---------ZAT18   --------       <----------DOF2        <----------DOF2           <-----------GT1--------->TOE2(2) <-------TEIL   tcaaattttctttgttacgattgaaatagaggcttttttcttctttaaaagagagttttttcttttctttttacctgggtactcgaatagatgcaaccat  2994500                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                         ----------->HVH21                                                      <----                     ===========================bZIP_DOF                                     --------                     <----------DOF2                           <---------YAB1           --------->MYB52(1)                     ------>ZmHOX2a(1)              <----------DOF2                    ------->GAMYB< ------->TOE1(3) <-----------GT1                  <------------------------ANAC81     --------->MYB46(3) ------->TOE2(3) --------->ARR11(3)            <---------At4g35610                    <---------MYB52(2) -->YAB1         <---------ARR11(3)            --------->At4g35610                    <---------MYB55(2) -->AtMYB61     --------->CCA1(1)     =========================bZIP_DOF               <---------MYB111(2) ->MYB46(3)     --------->RVE1(1)     <---------TGA1a      <----------DOF2          ----------->RAV1(1)   accttaaaaaaactataaatatcctttctgacccattctcaagtcggacatctgctttcatctttctgattttcgagtcatttatccaacaaacagagtt  2994600     <----------DOF2  <---------YAB1                                                        ----------->GT1 ---------AHL20(2)                                                     --------->DAG2 ------->HAHB4                                                     <---------TOE2(3) --------YAB1                                                   --------->ICU4 ------->ICU4                                             <---------HSFB2a(2) --------ATHB51                                           >>>>>>>ZML2 ---------->DOF2 -----AHL20(2)                                            --------->HSFB2a(2) --->GT1                          <---------LBD16   --------------->AGL15                      <----- ---------ICU4        <---------ATHB12        ----------------------->TaNAC69(2) <----------DOF2   aattattctttgtttcatgtccaaatcaagtttatttggggaacaagtgtttagcctgttctagtaattaagaaaagtaatttctttgatttcatttttc  2994700  Previous    Next  AGI:  At2g07212.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 2994235    to: 2995471    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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