Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->DAG2                 --------->LBD16                <---------HSFB2a(2)     --------->ANAC46---------->DOF2 <-----------GT1--------->LBD16 -------ARR11(3)--------->ANAC46             <---------At4g35610 -------GLK1(2)<---------LBD16               --------->At4g35610 ------>ARR11(3)--------->HSFB2a(2)        <---------ANAC58 ------>ARR10  <---------HSFB2a(2)         <---------ANAC58 -->RAV1(2)    --------->HSFB2a(2)    <---------AtLEC2            <---------ATHB12 >At4g35610<----------DOF2       --------->ARR11(3)   --------->MYB46(3) >ZAT2     <---------DAG2        <---------ARR11(3) --------->ANAC46       --------------------->WRI1   gattttcccatcactttcccggaaaaagcagcgattatcttcatggcttctcactcaccactatcccactgatgcttcagagtatgtttcgctactctct  2975200                <---------DAG2                                                           <----------DOF2                <----------DOF2                                                      <---------MYB52(1)             <-----------GT1              <----------DOF2                          ----------->GT1           <-----------GT1        <-----------RAV1(1)                      --------->ATHB12    <---------MYB52(1)       <-----------GT1                               ----------->GT1   cttccccttaatttttcactttctctgcatttttctgtgttgttctttggaattagagtaatgcgcgatgaagaaaatggttgaatcgttactttagagt  2975300                                     ================================================================                     --------->YAB1  ------------>CBF            <-------TEIL                    <---------YAB1   <-----------------AGL3     --------->GLK1(2)               -----      <---------MYB52(1)--------->YAB1                          --------->CCA1(2)               <----     <-------GAMYB  --------->ICU4   ----------------->AGL3     --------->ARR14(1)  ----------->GT1    <-----------RAV1(1)<---------YAB1<-----------------AGL2    --------->ARR11(1) ----------->GT1   aattcgctgttgttttttggttattatcatcgtcttctatccaattttagagcgaattaagtagagattcgattttgtttagagtagagaaaatttcgaa  2975400                                        --------->AHL20(2)                                        --------->YAB1                                           ----                                       <---------ATHB12                                          <---                                       <---------ATHB51                                    ------>ZmHOX2a(2)                                    <---------------AGL15                                 <------ZmHOX2a(2)                    <-----------GT1<-----------------AGL2                                <---------ARR11(3)    <---------MYB52(1)--------->YAB1--------------->AGL15                                <---------GLK1(2)   <-------GAMYB   --------->YAB1  ------------>CBF                      <----------DOF2 --------->ARR14(2)  <-----------RAV1(1)<---------YAB1----------------->AGL3               <---------ANAC58 <---------ARR14(2) ===================================================MADS_MADS           <---------ANAC58 --------->ARR11(3) ---->ARR14(2)    <---------YAB1   <-----------------AGL3     --------->CCA1(2)          --------->AGP1 -----ARR14(2)    --------->ICU4<----------DOF2            ----------->ARR10       <-----------GT1  <   ttcgctgttgttttttggttattatcatcttcttctttccaattatagagcgaattagggagagatttgaatttgcttcttcgattcaccagatccttga  2975500                                      <------------CBF                            <-----------RAV1(1)                                ---------->DOF2                          <---------ANAC58                                 --------->ANAC58                          <---------ANAC46                 <---------YAB1  --------->ANAC58 --------->REM1(1)        <---------ANAC58      <---------TOE2(3)      --------->AtLEC2             - ----->At4g35610    <---------YAB1   --------->ATHB12--------->ICU4    --------->ANAC58     <------ZmHOX2a(1) ------At4g35610  --------->YAB1    <---------MYB52(1)<------ZmHOX2a(1)--------->ANAC58    ---------- -------TEIL ------------>CBF       --------->ICU4<------ZmHOX2a(1) ------->TEIL         <------ZmHOX2a(1)   gctacatgtctcagactcaattctaattccttgttgcagttattggatttgaggaaggattatgaagacgaacatgcaagtaaaaggaagaggaggaaac  2975600                                                                                     --------->ANAC55(2)                                                    <---------YAB1                   <---------ANAC55(2)                                                   <-------GAMYB                    <-------TEIL                  --------->ANAC46                --------->MYB111(2)              --------->CCA1(2)                --------->ANAC46                  <---------MYB46(3)        <---------ARR14(2)         --------->YAB1            <---------At4g35610                      --------->ARR14(2) -------->RAP2.6(3)                --------->At4g35610                  --------->At4g35610 ->GT1  --------->ZAT6      <---------YAB1>>>>>>>>>TBF1                 <---------At4g35610      <---   atgaaggctaatactaatacacaacaagtgatttttgagctgaagaagaaggttgttattgcattaaacaagttagcagatagagatacatatcagagag  2975700                                           ----------->GT1                                          --------->DAG2                                          <---------TOE2(3)                                          <---------TOE1(3)                                      <---                                       <---------ARR14(2)                               --------->At4g35610                                       --------->ARR14(2)                            --------->At4g35610                                     --------->LBD16                                 <---------At4g35610                                   <---------At4g35610                        <---------GLK1(2)  <---                                   <---------LBD16                          <---------YAB1     ------                                   <------NtERF2                        --------->ARR14(2)     <----- ---ZmHOX2a(1)                    ------>NtERF2                         <---------ARR14(2)     ------   gagttgatgagcttgagaaaactgttgagcatttggcaccggataaggtttcatgttttctctcttgtattttggatactgattctgagcagaagagtgc  2975800                                                                 <---------ARR11(1)                                                                 <---------ARR14(2)                                                                 <-----------ARR10    ---------->DOF2                                              --------->ARR11(3)   <------ZmHOX2a(1) --------->ATHB12                            --------->ARR14(2)              <--- -------DOF2        <-------TEIL                                 <---------ARR11(3)       <---------ZAT6 ------ANAC46    <------MYB46(1)                                <---------CCA1(2)   --------------->AGL15 --->ZAT14       <------MYB83 <----------DOF2             <------MYB83              --------->HSFB2a(2) ----ZAT14      --------->MYB59       <------MYB83        <------MYB46(1)     ----------->GT1   <---- --->ZAT18      <---------TOE2(3)     <------MYB46(1)   <--------P     <XXXXXXXXXXXXXXXXXXXXMIR844*   tgtgaggaaagagtgtattaggttgatggggactttagctaggtttcatgagggacttgttggtccatatcttggtaagatggtttctagtattgttaag  2975900             <---------GLK1(2)           ------>ZmHOX2a(1)           <---------YAB1         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       --------->ARR11(3)       <---------ARR11(3)      <---------ANAC58       <---------ARR14(2)      <---------ANAC58       --------->ARR14(2)      <---------ANAC55(1)      <------ZmHOX2a(1)        <---------ANAC55(2)        <---------ANAC58    <---------TOE2(3)         <-------TEIL                <---------ANAC58    <---------TOE1(3)      --------->CCA1(2)    <---------ANAC58                       <---------ARR11(3) ------RAP2.6(2)  <-------GAMYB<---------ANAC46 <---------ANAC58             <---------YAB1   ------- -----At4g35610  <-----------RAV1(1)     <<<<<<<<<<<<<<<<<LFY           <---------MYB46(3)<----------DOF2   cggcttaaggatcctgattctgttgtgagagatgcgtgtattgagacaatgggtgttttggcttccaagatgagttgttatgaagaccagaactttggtg  2976000                                                                            <---------AtLEC2                                                                    ------>NtERF2                                                                  --------->ATERF1(1)                                                                 <---------At4g35610                                                                 --------->At4g35610                                                                 --------->ZAT2                                                              <---------At4g35610<---------ANAC58                                                             <-----------RAV1(1) <---------ANAC58                     <----------DOF2                   <---------ZAT18      <---------ANAC58       <---------ANAC58                                --------->ZAT14      <---------ANAC58       <---------ANAC58                                --------->ZAT18    <---------YAB1    --------- --->ID1             <---------DAG2      --------->YAB1<---------ZAT14<---------DAG2    --------->ATHB12   tttttgtttccttggtgaaacctctttttgaagctattggtgatcagaataagtatgtgcagtctggtgctgccttatgcttggcgagagttattgatag  2976100  Previous    Next  AGI:  At2g07170.1    Description:  binding. similar to TOR1 (TORTIFOLIA 1) [Arabidopsis thaliana] (TAIR:AT4G27060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66531.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 2975562    to: 2978817    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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