Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ------>MYB46(1)                 ------>MYB83                                                             <---------ATHB12    --------->AHL20(2)                                        <-----------GT1       --------->YAB1 ---------AHL20(2)                                       <---------ALFIN1           <---------ICU4 -------->AHL20(2)  <----------DOF2                    --------->ANAC46            --------->ICU4 <-- ---->GT1    ------->TEIL     <---------MYB52(1) <----------DOF2                   <---------ATHB12   gatttattaaacatgaaccaagcttttctactggtattttctctgagttatcttttcccccaagttacaagttgtacaactagaaatcatcactcattca  2957200                                                                                                    <                                                                                            <-------TEIL                                                                    ==============================HOX2a_HOX2a                                                                  <---------TOE1(3)        <------ZmHOX2a(2)                                                                  --------->ANAC55(2)     --------->AGP1              --------->ARR14(2)                                  <---------ANAC55(2)     --------->ARR11(3)      --------->ARR11(3)         --------->YAB1            ---------->DOF2                <---------ARR11(3)      <---------ARR11(3)         <---------ICU4       <---------ALFIN1            --------->YAB1-----   <---------TOE2(3)    ---------->DOF2               --------------->AGL15    <------------CBF<-----  ---------->DOF2   --------->ZAT6                 --------->ANAC46 <------ZmHOX2a(1)    <---------GLK1(1) --------DOF2 <---------ARR14(2)<---------ATHB12   <-----------GT1<---------TOE2(3)      --------->GLK1(1)   cttttaaagttcttcggttctaccactaaagctaatcatgttatcttacaaatacaccacttaaagttaaggaactaaatctattgataagagatccatt  2957300                                                                                              -------                                                                                          --------->At4g35610                                                                                       <------NtERF2                                                                                      ------>NtERF2                           --------->YAB1                                            --------->ATERF1(2)                           --------->TOE2(3)                                         <---------ATERF1(2)                         <---------ARR11(3)                                         <---------ANAC58           --------->AHL20(2)         <------ZmHOX2a(1)                             <---------ANAC46        ----------->GT1  --------->ARR11(3)                                        <---------At4g35610 --------->MYB52(1)     --------->GLK1(1)       --------->ARR14(2)             <-----------RAV1(1) ---------AHL20(2)      <---------GLK1(1)       <---------ARR14(2)        <-----------RAV1(1)-------- ---->AHL20(2)         <---------ARR11(3)      <------ZmHOX2a(1)       <---------MYB52(1) <---------At4g35610 ----MYB52(1)        <---------YAB1  <----------ID1               --------->MYB52(1)<---------ANAC58   aattaatggaagattaattcttgatgatatcttaattttaggacaaggaggattctaaggccaaaacttatcggttttgttgtgttgctggcagataaag  2957400                                      <---------YAB1                                   --------->ICU4                                 <------------CBF    <---------MYB52(1)                           ------>ZmHOX2a(1)        --------->LBD16    --------->ANAC46      -------- -->DAG2               --------->ARR14(2)         <---------LBD16     ------->TEIL--------->ARR11(3) -->DOF2               <---------ARR14(2)       <-----------GT1  ---------->DOF2<---------MYB52(1)   tgagtgactcaaaaaaacttatccaaatcctttggtattgattatcggtttatccggtttttaaactaaatgcacataaccagttatcttgaaatgaaag  2957500                                                                    --------->At4g35610                                                                    --------->HSFC1(2)                                                                    --------->ZAT2                                                                    <---------HSFB2a(1)                                                                    <---------HSFC1(2)                                                                    --------->HSFB2a(1)                                                                    <---------ZAT2                                                                    <---------At4g35610                                                                 --------->LBD16                                                               <---------LBD16                                                               <---------------------WRI1                                                              <---------DOF5.7(2)                                                              --------->MYB52(1)                                                            --------->DOF5.7(2)                                                          --------->bZIP60(1)                                                          <---------bZIP60(1)                <-------                                                          <---------ANAC55(2)                <-------   --------->ANAC58                                      <---------TOE2(3)                   --------   --------->ANAC58               --------->ARR14(2)   ----------->TGA1                      <-------  <---------GLK1(1)               <---------ARR14(2) <---------ICU4<---------ARR14(2)        -------- ---------->DOF2         <---------ALFIN1<---------ZAT14 ----------->STF1     <------ZmHOX2a(1) -->DOF2        <------------CBF  <---------GLK1(2)  --------->YAB1--------->ARR14(2)      ----------   atggaaagccctagactatattgagagccacttgccgattttcttcagtgatcaaaaatgacgttaccggagcttccaaaggatttagtagaagagatac  2957600               --------->REM1(1)               --------->O2               <---------ALFIN1          ------>NtERF2          --------->ANAC46         <---------RAP2.6(2) <---------MYB52(1) --ARR14(2)    --------->bZIP60(2)   <---------ALFIN1 --GLK1(2)--------->LBD16          <------ZmHOX2a(2) ->ARR11(3)  ----------->RAV1(1)   ====================HOX2a_HOX2a --ARR11(3)  <---------ALFIN1     <---------ARR14(2)                --------->YAB1 ->ARR14(2)------>NtERF2          --------->ARR14(2)    ----------->GT1 ->ARR10<---------LBD16         <---------YAB1  <------ZmHOX2a(1)---------->DOF2 <-------TEIL   tcagttttgttccggccacatctctgaagcgattacgatccacttgcaaaggatggaatcgtttattcaaagatgacaagagattcacaagaatacacac  2957700                                        <---------ARR11(3)                                 <---------DOF5.7(2)                                --------->WRKY38(1)      ------>ZmHOX2a(1)         ---------->DOF2        --------->WRKY12 <---------ARR14(2)        --------->AtLEC2       --------->LBD16          --------->WRKY45 --------->ARR14(2)        --------->ANAC46      --------->RAP2.6(2)      --------->DOF5.7(2)    ---------->ID1     <---------AtLEC2        ----      --------->RAP2.3(2)    <---------O2       <------ZmHOX2a(1)  --------->WOX13(1)           -----  --------->DAG2          ----------->HVH21 --------->MYB52(1)  --------->TOE2(3)           <-------- ---------->DOF2    <-----------GT1     --------->ARR11(3)     --------->ANAC46             ---------   tgaaaaagccgcaaagcagtttcaacctctcacgttgacgaagaactacaggatttgtcctataaacgtcaatctccatggaactactccatctctagag  2957800                       <------ZmHOX2a(2)                      <---------ARR14(2)                                                          ---                      --------->ARR14(2)                                                          <--             --------->At4g35610                                                                  ---         <-----------HVH21------>ZmHOX2a(1)  <---------At4g35610                                 <---        <---------bZIP60(1)                  <---------ZAT2                        <---------ANAC46        --------->bZIP60(1)                  --------->At4g35610                   <---------ANAC58 - ------->GT1 --------->ZAT2               <---------At4g35610                      <---------ANAC58 - ------>GT1  <---------At4g35610          --------->At4g35610               <-----------HVH21    ---- -HSFB2a(2)  <---------ZAT2          <---------GLK1(1)                   <---------At5g28300    ----- >HSFB2a(2)<---------WRKY12  --------->ZAT6  --------->ZAT2          <----------DOF2   ---------->ID1   gttaaaaatgaggtcagcttactcgatcctcactctaagaattcagcagctcagttcaatatagatcgagtctttcactgtgatggcttgttgttatgca  2957900           <-------TEIL                                                 <-------GAMYB     ---------->DOF2                                                   ------>ZmHOX2a(2) ------>DEAR3(1)                                                       ----------->GT1 -------ALFIN1                                                         <---------MYB46(3)  <--------- ------>AtMYB61   <-------TEIL                                    <------NtERF2           <---------ANAC46 ------At4g35610--------->ARR11(1)                                <---------------------WRI1    <---- ----->MYB83    --------->ARR14(2)                        ------>ZmHOX2a(2)               <---------ANAC58 ----->MYB46(1) <---------GLK1(2)                       <---------ARR14(2)     <---------MYB52(2) ----->At4g35610<---------ARR14(2)         <---------REM1(1)    <---------DEAR3(1)   --------->ALFIN1 -->TEIL  --------->CCA1(2)       <----------DOF2    --------->ALFIN1 <------ZmHOX2a(2)   <---------ANAC58   cctcccaaaaagattcaagattcgtcgtttggaaccctttaactggtgtaaccaagtggatcgaactcggcgatcgttacaacgaaggtatggcttttat  2958000                                                                 --------->ARR14(2)                                                              --------->ANAC58                                                    --------->ATHB51                                                    --------->AHL20(2)                                                   --------->ICU4<---------GLK1(2)                                                --------->AHL20(2)         --------->TOE1(2)    --------->CCA1(2)                           <---------AHL20(2)         --------->TOE2(2)   <---------ARR14(2)                         <----------DOF2 --------->ANAC58   --------->ARR14(2) --------->YAB1--------->ANAC58<---------AHL20(2)  --------->GLK1(1) -DOF2             ----------->GT1---------->DOF2--------->YAB1  <---------ARR14(2)                 < -----YAB1         ------>ZmHOX2a(1)--------->ANAC58<---------ICU4--------->GLK1(2)       -----------   tcttggatatgacaacaagtcctgtaataagagctacaaagccatgagctttaattatttagacaaggattctgaaatctacgagtttagctctgactca  2958100  Previous    Next  AGI:  At2g07140.1    Description:  F-box family protein. Identical to F-box protein At2g07140 [Arabidopsis Thaliana] (GB:Q9ZV78); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G44120.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD37944.1); similar to F-box domain-containing protein [Solanum tuberosum] (GB:ABO92991.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 2957558    to: 2958712    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version