Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      x                                                                                                    <                                 --------->ANAC46                                                  --                               --------->ZAT6                                                      xx                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      <---                      <---------YAB1                                                             <---                     --------->AHL20(2)                                                          <---                     <---------AHL20(1)  --------->AHL20(2)                                     -----                     <---------AHL20(2) --------->AHL20(1)                            <---------ARR11(3)                    --------->YAB1      <---------AHL20(1)                            --------->ARR11(3)                ------->TEIL   --------->ANAC46                     <---------YAB1  <---------AHL20(2)        <-----------GT1   <---------AHL20(2)           <---------ICU4              --------->AHL20(2) ---->ZAT6      <-------TEIL <-----------GT1    --------->ZAT6     <---------AHL20(1)xxxxxxxxxxxxxxxx -----GT1   --------------->AtSPL8      <---------ARR11(3)  <---------YAB1 --------->YAB1       <----   actatacatttttctatgtacattataatttatacactacaatatatatatcactaaaaattattctaatatgtttattagaatataaaatctccaagta  2924000          --------->GLK1(2)     <xxxxxxxxxxxxxxxxsmallRNA(s)    <-----------HVH21  --------->LBD16 <xxxxxxxxxxxxxxxxsmallRNA(i) <---------ANAC58 <---------ANAC58                                             --------->YAB1 xxxxxxxxxxxxxxx>smallRNA(i)                                 <---------YAB1 ---------LBD16                                           <---------AHL20(2) ------->ALFIN1                                           --------->AHL20(2) xxxxxxxxxxxxxx>smallRNA(s)     --------->AHL20(2)    <---------AHL20(2) ------ANAC58                  --------->AHL20(2)     --------->AHL20(2) ------ANAC58                --------->YAB1          --------->AHL20(2) ------ANAC55(2)           <---------AHL20(2)        <---------AHL20(2) ------->OsbHLH66 ----------->GT1                 --------->YAB1                                    - xxxxxxx>smallRNA(i2)    <---------AHL20(2) ----------->GT1--------->YAB1            --------->AHL20(2) ---TEIL <---------GLK1(2) --------->AHL20(2)     --------->AHL20(2)    --------->YAB1      <--------   cgtgcgggtcagaatctagtttgttatataaaaataaaaaaccaaaatgtaataaaaaaatttataataaactctcataaaaacgaattaaaaaacatta  2924100                                         ----------->GT1                                         <---------YAB1                                         --------->ICU4                                        <---------TOE2(3)                                       <---------ICU4                                       --------->YAB1                                     <---------AHL20(2)            --------->TOE2(3)            --------->YAB1          --------->YAB1            <---------ARR11(3)            --------->TOE2(3)      <---------YAB1             --------->ARR11(3)            --------->TOE1(3)     --------->AHL20(2)        <---------YAB1    --------->AHL20(2)            <---------AHL20(2)      --------->YAB1 --------->TOE2(3)                --------->AHL20(1)<---------AHL20(1) --------->TOE1(3)               --------->YAB1    --------->AHL20(2) ---------->GT1          ------->GAMYB--------->ICU4--------->AHL20(1)                     <--------P -ICU4--------->YAB1    --------->MYB46(3)     <---------YAB1--------->YAB1  <---------CCA1(2)-------   ctacgttaaaataatcttaaacttcaacagtcaaattataataatgtttataaatatatatgatgatattcttagaatcaaatctcgattttggtagatt  2924200          <---------ARR14(2)                                                            --------->ANAC46          --------->ARR14(2)                                                            --------->ANAC58          <---------GLK1(2)                                                             --------->ANAC58        ----------->ARR10                                                           <<<<<<<ZML2        <------MYB46(1)                                                          --------->HSFB2a(2)        <------MYB83                              <----------DOF2      --------->ARR14(2)      <---------MYB52(1)                       <-----------GT1         <---------ARR14(2) -----------      <--------P                           <---------AHL20(2)    <-----------GT1 <---------HSFB2a(2)     <-------GAMYB      <----------DOF2--------->YAB1     <----------DOF2     --------->ZAT6    <---- -->ARR11(3)      <---------ICU4      <---------YAB1  <----------DOF2 <---------CCA1(2)--------->TOE1(2)   tcgattcggttggattctcaacatttctttcaaattatctatgattttttttctttctttctttttttaaacatatctgaactctagaacaagcgaccgt  2924300                                                                          ----------->HVH21                                                                         <-------MYC3                                                                         ------->MYC3                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)                                                                        --------->TGA1a                                                                        =============================                               --------->AHL20(2)                       <---------O2                               <---------AHL20(2)                       --------->ANAC46                      ----------------->AGL3                            --------->bZIP60(1)                     --------->CCA1(2)                                  <---------bZIP60(1)                     <------ZmHOX2a(2)                                  <---------bZIP60(2)                    <---------ARR11(3)                                  --------->O2                    --------->ARR11(3)                                  <---------TGA1a                    --------->AGP1                                    ------------->DYT1      <------   --------->ICU4  --------->GLK1(1)                        --------->AHL20(1)           <---------AHL20(1) --------->YAB1    <---------GLK1(1)    <---------MYB111(1) <---------AHL20(1)           --------->AHL20(2) >HVH21  ---------->DOF2   --------->AHL20(2)               --------->ARR11(3)           <---------AHL20(2) -----MYB52(1)---------->DOF2  <---------YAB1              --------->AHL20(2)     --------->YAB1   gagtcataaataaaaggaaagagatccaaaaatataaatgcaactacttgaaatcgactaaatatatcgaaatcacgtgacaaatcagcattttatttat  2924400               <------MYB83               <---------DEAR3(2)               <---------MYB46(3)          <---------YAB1                                         --------->GLK1(2)      <---------DAG2                                             --------->ARR14(2)      <----------DOF2                                  ----------->RAV1(2)                    ------>ZmHOX2a(1)   <---------AHL20(2)      ------>ZmHOX2a(1)      <-----------------AGL1                   <------ZmHOX2a(2)   <-----------GT1  <---------ALFIN1          --------------->AtSPL8                      <---------ARR14(2) ================bZIP_DOF  <----------DOF2    <---------------AtSPL8   ------->TEIL       --------->ARR14(2) ---AHL20(2)   <------MYB46(1)              *TSS  <---------ZAT18<---------ARR14(2) <<<<<<<<<TBF1>>>>   tctattaactttatagttggttccacatcctttcactctattcgatgtattgtacacatctggcacaaatctgcatctctgtcttcttcttcgatcctcg  2924500                                               ------->TEIL                                    <-----------GT1     --------->GLK1(2)                  --------->ANAC58                                  <-----------GT1   --------->HSFB2a(2)                    --------->ANAC46                               <---------GLK1(2)    <---------HSFB2a(2)                    --------->ANAC58                        <<<<<<<<<CBP60g       <---------GLK1(2)                          --------->MYB52(1) >>>>>>GATA-1           <<<<<<<<<SARD1  ------>ZmHOX2a(1)       <---------MYB52(1)    <------ZmHOX2a(2)   atttcatccacaatatacaatagccaaatttccgattttctcctcactgaatctctagaatccatcgttgattcaaactcattttccgatcaaacggcat  2924600                                                                                  <-----------HVH21                                               <------ZmHOX2a(1)                 <---------O2                                          --------->LBD16                        <---------bZIP60(1)                                        <---------LBD16                          --------->ANAC46                                       ===============HOX2a_HOX2a           <---------ICU4                                       ------>ZmHOX2a(2)                    --------->YAB1                                      <------ZmHOX2a(2)                    --------->ICU4                                      ================HOX2a_HOX2a          <---------ATHB12                                     <---------ARR11(3)             --------->MYB46(3)  <-----------GT1                    <---------ARR14(2)      <---------ANAC46    --------->TGA1a  ---------->ID1                     --------->ARR11(3)      <---------ANAC58    <---------TGA1a <-----------GT1                     --------->ARR14(2)      <---------ANAC58    --------->O2   atttttccctctcgagagagcgataatgtggaaactgaagatcgcggaaggaggtagtccatggcttagaaccaccaataatcacgtcggaagacagttt  2924700                                          ------>NtERF2                                          <-----------HVH21                                         --------->RAP2.3(2)                                         --------->RAP2.3(3)                                         --------->DEAR3(1)                                        --------->ERF1                                        --------->DEAR4(2)                                        <------NtERF2                                        --------->RRTF1(1)                                        --------->RAP2.3(1)                                        --------->ATERF1(1)                                       <---------ATERF1(1)                                       ------>NtERF2                                       --------->ABI4(1)                                      --------->ANAC46                                      --------->RAP2.3(3)                                      --------->RRTF1(3)                                      --------->RAP2.3(2)                                      <---------DEAR3(1)                                      --------->DEAR3(1)                                     --------->ERF1                                     --------->RAP2.3(1)                                     --------->ATERF1(1)                                     --------->DEAR4(2)                                    <---------ATERF1(1)                                 ==============================HOX2a_HOX2a                                 ------>ZmHOX2a(2)                                --------->GLK1(1)                                <---------GLK1(1)                                <------ZmHOX2a(2)                                ===============================HOX2a_HOX2a             <---------ARR11(1)--------->ARR14(3)             <---------ARR14(2)<---------ARR14(3)             --------->GLK1(2) <-----------ARR10             ------->TEIL      --------->ARR11(3)             <-----------ARR10 --------->GLK1(2)             --------->ARR14(2)<---------ARR11(3)            <---------GLK1(2)  --------->ARR14(2)            <---------CCA1(2)  <---------ARR14(2)            <---------ARR14(1) <---------AGP1         ============================HOX2a_HOX2a         ========================HOX2a_HOX2a         ------>ZmHOX2a(2)    <------ZmHOX2a(1)        <------ZmHOX2a(2) ==============HOX2a_HOX2a                             <---------ANAC46        =========================HOX2a_HOX2a                      <---------LBD16                   -        =============================HOX2a_HOX2a              <----------DOF2   <---------ANAC58    <       <---------ARR14(2) =============HOX2a_HOX2a  --------->TOE1(2)           <---------ANAC58  ---       --------->ARR14(2) ------>ZmHOX2a(1)       --------->GLK1(2)<---------ANAC46               ---  --------->GLK1(1)     ----------->RAV1(2)<------NtERF2<------ZmHOX2a(1)      <-------TEIL      <---   tgggagttcgatccgaatctcggtactcctgaggatctcgccgccgtcgaagaagctaggaagtctttttcggataatcgattcgtgcagaaacatagcg  2924800                                                            --------->ZAT14                                                            <---------ZAT18                                                       <---------ZAT14                                                  --------->WRKY38(1)               --------->ANAC58              <----------DOF2                     --------->WRKY45                  --------->ANAC58  ------>ZmHOX2a(2)                               --------->WRKY12              --------->GLK1(2) <------ZmHOX2a(2)                              <---------At4g35610             --------->ARR14(2) -------->ARR14(2)                              <-------GAMYB<---------AtMYB61  <---------ARR14(2) ---------ARR14(2)                             <---------ANAC46                 ------->TEIL -------->ARR10<-----------HVH21 <---------ANAC58<---------MYB52(1)       ----------->HVH21 ------>DEAR3(1) <-----------RAV1(2)   <----------DOF2<----------DOF2     ----------->TGA1 ---NtERF2  ------->TEIL         <---------ANAC58--------->DOF5.7(2)<---------WRKY18(1)<---------TOE1(2)   ccgatctgcttatgcgccttcaggtattatctctggcttctctttgtttccgttgactttagtgtggtcttgactggtgacgaatctcgcaagttttagt  2924900  Previous    Next  AGI:  At2g07050.1    Description:  CAS1 (CYCLOARTENOL SYNTHASE 1); cycloartenol synthase. Identical to Cycloartenol synthase (CAS1) [Arabidopsis Thaliana] (GB:P38605;GB:P92967); similar to LAS1 (Lanosterol synthase 1), lanosterol synthase [Arabidopsis thaliana] (TAIR:AT3G45130.1); similar to ATLUP2 (Arabidopsis thaliana lupeol synthase 2), lupeol synthase [Arabidopsis thaliana] (TAIR:AT1G78960.1); similar to CAMS1 (CAMELLIOL C SYNTHASE 1), beta-amyrin synthase [Arabidopsis thaliana] (TAIR:AT1G78955.1); similar to cycloartenol synthase [Glycyrrhiza glabra] (GB:BAA76902.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66520.1); similar to cycloartenol synthase [Lo Range:  from: 2924444    to: 2930669    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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