Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                      <---------TOE2(3)         ----------->GT1       <---------MYB46(3)                                      <---------TOE1(3)      <---------MYB52(2)  <---------AHL20(2)                             ------>ZmHOX2a(1)          --------->ANAC58       <---------TOE2(3)                         <---------ARR11(3)             --------->ANAC58    <---------YAB1  <--------                ------->TEIL<---------MYB59           ---------->DOF2  ----------->GT1----------->GT1   aattatctaaacagtatgaaactacaagttcctaatagttaatgttttgacatttacaaagcaactaagtaaaatgttattaatgaattggttacttttt  2763100                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   <---------CCA1(2) >>>>>>>>>WRKY18     --------->ANAC46 --------->ANAC58         ----------->GT1     <---------AHL20(2)     <---------GLK1(1)     --------->ANAC58        ----------->GT1     <---------AHL20(2)      --------->GLK1(1)     --------->ANAC55(1) ----------->GT1<-------TEIL--------->AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->AHL20(2) --DOF2--------->DAG2   --------->ICU4   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)           <---------AHL20(2) -DAG2---------->DOF2   <---------YAB1XXXXXXXXXXXXXXXXXXXX>MIR157A-C      --------->ANAC46        ---   ttttggtaaaaagttaaattcatatcatttttaaatttttgacagaaaatacagaaatcacagaacaaatgaaaacacgctattgaaaaattaaaaacaa  2763200                                                        <---------ANAC58                                                   <<<<<<<<<RAP2.2                                                  <---------TOE2(3)                                               <XXXXXXXXXXXXXXXXXXXXMIR832-3P                     <--------P            <---------ANAC58           --------->DAG2                  <---------ANAC58          ---------->DOF2                  <---------ANAC55(2)                           --------->YAB1  <---------YAB1    <---------ANAC58       --------->ANAC55(2)           <---------------AGL15  <---------AHL20(2)<-------GAMYB          <---------ANAC46              --------------->AGL15 --------->YAB1   <---------AtMYB61        <---------ANAC55(1)          ----------------->AGL2 <---------AHL20(1) <---------ANAC58      --------->MYB52(2)            --------->MYB46(3) --------->AHL20(2)<---------MYB46(3) <---------MYB46(3)<---------ANAC58----------------->AGL3 ------>YAB1   <----------DOF2        ----------->GT1   ----------->GT1 ----------------->AG        <   caatattattcaaaaagcttttggttgctactgaatgaattggttacttgtttagattgggtaacaaaattctaaccaaaactagaatcactaatactca  2763300                                                               ------->TEIL                                                            <---------ANAC55(2)                                              <---------At4g35610          --------->YAB1                      --------->At4g35610--------->YAB1       ------>MYB46(1)                     ---------->DOF2  --------->ANAC55(2)       ------>MYB83                      <---------YAB1    ------->TEIL               --------->ANAC58     <---------MYB59                 >>>>>>>>>ARR2       <---------SPL7     <-----------GT1    <-----  <-----------GT1                   --------->ATHB12   --------------->AtSPL3         --------->ANAC58 ----------DOF2                    <---------YAB1      <---------------AtSPL3         --------->ANAC46   ttctttaccaaataatacttcaaattcaaataagagtttgattgtgaaagctgtatagctgtacgtatcatgtccatattacagttgtaagccattgtta  2763400                                                                                     --------->AHL20(2)                                                                                --------->TOE2(3)                                                                               ----------->GT1                                    <---------HSFB2a(2)                        --------->YAB1                            ---------->DOF2                                   <---------TOE2(3)    --                       --------->YAB1                                         <---------YAB1       --                      <---------AHL20(2)                                   <---------YAB1       <----                   --------->AHL20(2)            --------->YAB1          <---------ICU4         -----                  <---------AHL20(2)--------->LBD16                     <---------YAB1          <----                  --------->AHL20(2)--------->HSFB2a(2)                 --------->ICU4          ----- ------GT1      --------->YAB1     <---------TOE1(1)                   --------->TOE2(3)---------->DOF2   caaaactactaaaaacaaaaataaataatagaaaggtccgagaaacttgaataaaaatttagaatttttaaaacattattatcgtaaataaaaagagaac  2763500                                                                          --------->YAB1                                                                       --------->YAB1                                     --------->ANAC46                  <---------ICU4                                     --------->ANAC58                 <---------YAB1                                   --------->ANAC46                 <---------ICU4                                 <---------ALFIN1                   --------->YAB1                                 --------->AtMYB61                 <---------YAB1   --------->ANAC58              ------->GAMYB                   --------->YAB1   --------->ANAC46             <---------MYB55(2)               XXXXXXXXXXXXXXXXXXXX>MIR414   --------->ANAC58             --------->MYB46(3)            --------->YAB1 <---------ICU4 ---->MYB83                    ------>MYB83  <---------At4g35610 <---------ICU4 <---------ICU4 ---->MYB46(1)                 ------>MYB46(1)<---------GLK1(2) <---------YAB1 <---------YAB1 -----HSFC1(2)          ---------->DOF2   <---------MYB52(1)  <---------ICU4 --------->YAB1 ---->HSFC1(2)         *TSS    -------->P<----------DOF2     <---------YAB1 <---------YAB1          < -----HSFB2a(1)      ----------->TBP --------->ANAC58      --------->YAB1 <---------ICU4            - ---->HSFB2a(1)   ------>ZmHOX2a(1)<---------ALFIN1        <---------ICU4<---------YAB1         <----   ctcccaagaaacaagtcgtccttatataaagccaaccacacccctttagcttctctcaccatcatcatcatcatcatcatcatcatttctctctatctct  2763600                                                                                                 ----                                                                                                 ----                                                                                             --------             <---------YAB1                                                                  --------           <---------ICU4                                                                    --------     --------->ANAC46                                                                        -------- ---------HSFB2a(2)                                                                        <---------ALFIN1 -------->HSFB2a(2)        --------->At4g35610                            --------->YAB1 ------>ZmHOX2a(1) ------DOF2--------->YAB1  <---------At4g35610     <----------DOF2     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   ttctaaaacacaaccatgactgtttcttcatctccatgggctctcatggctctctttctaatggtttcttcaacaatggtaatggctattcctccacgca  2763700                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                                                                        <-------GAMYB                                                                        --------->ATERF1(1)                                                                       <---------MYB46(3)                                                                       <---------DEAR3(2)       <---------REM1(1)                                              <---------ANAC46      --------------->AtSPL3                                          <---------DEAR3(1)      --------------->AtSPL8                                          <---------RAP2.6(2) ----->ANAC58                                         --------->ANAC46<---------DREB2C(2) ----->ANAC58                                      ----------->RAV1(1)<---------ANAC58       ------>ZmHOX2a(1) ->ANAC58        <------MYB46(1)                  --------->AtMYB61   <---------ANAC58   <---------ARR14(2) ->AtLEC2        <------MYB83                    --------->MYB46(3) ------------>AtMYB77 --------->ARR14(2) ->ANAC58 ------->TEIL                     <----------DOF2     <---------ZAT14       --------->At4g35610 ->ANAC46<-----------GT1    --------->ANAC46   <-----------GT1 --------->ZAT14       <---------At4g35610   aggccattgatgtaccatttggtcgtaactacgtcccaacttgggcttttgaccaccagaaacagttcaatggcggttccgaacttcagcttatcctcga  2763800                                        -------->HAHB4                                        <---------ICU4                                        --------->YAB1                           <-----------ARR10                          <---------CCA1(2)                                   <------MYB83                          ------>MYB83 --------->ICU4                        --------->MYB59                          ------>MYB46(1)  --------->YAB1                <---------AHL20(2)                        <---------MYB59<---------ATHB12                 <---------AHL20(2)---------->DOF2                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <-----------GT1<------MYB46(1) -------                 <---------YAB1  ------>NtERF2              <----------TaMYB80----------->GT1 -------   caaatacactggtacaattactattaccaaatctctgcctaatgatcacaatgcaagttttgatattcccattttttatttggtatataggctaaagctt  2763900                                                                    --------->YAB1                                                                    <---------ICU4                                                                 --------->YAB1               <------                                                              --------->TOE2(3)              --------        ----------->GT1                                     <---------YAB1                   <-------       ----------->GT1                                   --------->ICU4                      <-------      <---------TOE1(3)                               --------->AHL20(2)          <-----------GT1 <--      <---------TOE2(3)                               <---------AHL20(2)       <---------YAB1--------    ---------->DOF2          --------->ZAT6         <---------ANAC55(2)       <---------AHL20(2)  --- -->TOE1(3)       <---------ANAC58                  --------->ANAC55(2)     <---------YAB1   <------- -->TOE2(3)       <---------ANAC58                  ----------->GT1<---------ATHB12          --------   aatttttaaaggttaaattttcttgagtttaaaactacatttcatttacagattaagtaattagcattaatcatctctattattttacaactcaatatat  2764000  Previous    Next  AGI:  At2g06850.1    Description:  EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE); hydrolase, acting on glycosyl bonds. Identical to Xyloglucan endotransglucosylase/hydrolase protein 4 precursor (XTH4) [Arabidopsis Thaliana] (GB:Q39099;GB:Q94F33); similar to EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT5G13870.1); similar to Xyloglucan endotransglucosylase/hydrolase precursor (BobXET16A) (GB:Q6YDN9); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Xyloglucan endot Range:  from: 2763523    to: 2765717    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version