Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ATHB51                                                                          <---------ATHB12                         <---------ANAC58                     --------->YAB1      ----------------->AGL1                                  --------->ATHB12 ----------DOF2          <---------ANAC46                     <--------HAHB4 -----CCA1(2)         <---------WOX13(1)                      <---------ICU4    ---------->DOF2 ->TEIL   --------->MYB52(1)                                 --------->ICU4--------->YAB1 --->ARR14(2)       -------->HAHB4                           <---------ATHB12<---------YAB1 ----ARR14(2)       <--------ATHB1                           <---------YAB1<---------ICU4 ----ARR11(1)       <---------ICU4                       <------------------ATHB9                  -- ---CCA1(2)         --------->ATHB12                <------NtERF2         --------->ICU4           <- ---ARR14(1)       <---------YAB1                  ------>NtERF2        --------->WOX13(1)   -------- ->LBD16------>ZmHOX2a(1)<---------ANAC58          --------->PCF2     <---------MYB52(1)     -------- -ANAC55(2)        --------->ICU4                  <---------ZAT18<---------At5g28300        -------- >ANAC55(2)      --------->YAB1                   <---------RAP2.6(2)<-----------HVH21   <xxxxxxxxxxx   ctcttttgtcctgaacggataatgattgcgttcgaataggtttagaaacatggcgcccatgtaatcattaccgtcaattatgaaaagtatcgcacaagca  2646000              <---------YAB1    <---------ANAC58    <---------AtLEC2    <---------ANAC46    <---------ANAC58   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ------->ALFIN1 <xxxxxxxxxxxxxxxxsmallRNA(i)                                    <----------CDC5<----- ----------RAV1(1)                                                            --------->ANAC58 <----- ->ANAC46 xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       <---------ANAC58           ------ ->ANAC58 <---------ANAC58              <-------TEIL           <-------TEIL   --------->ANAC58 <----- ->ANAC58 <---------ANAC58             <--------P       <-----------HVH21     --------->ANAC46 <----- xxxxxxxxxxxxsmallRNA(se3)     <---------SPL7     --------->TOE2(3) <---------ANAC58          <------   agtgttgcatgggcttgtgatggaacatgaggtcgtaagaggttgatggctcccttaatgtcacgttcatgcgttagaacacgcagagcttcaaaatacg  2646100                       <---------ALFIN1                       --------->ANAC46                          xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     <---------ALFIN1                            <---------LBD16                     --------->ANAC46                            <------NtERF2              <---------ZAT2                                    ------>NtERF2              <------NtERF2                                     <---------ATERF1(1)              --------->ZAT2                                   <---------DEAR3(1)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              <---------PCF5             ------>NtERF2                                     ------>NtERF2        <---------WOX13(1)                                <---------LBD16  --------->ATHB12 ----ANAC58 --------->ATERF1(2)                          ----------->RAV1(2) ----O2 --------->GLK1(1)  <----------DOF2     <---------RAP2.6(2) <------NtERF2 --->ANAC55(2)--------->At4g35610              <---------DREB2C(2) <---------SPL7 ----ANAC58 <---------ATERF1(2)               --------->RAP2.6(3)--------->ATERF1(1)  <xxxxxxxxxxxxxx ----ANAC55(2)<---------At4g35610 ---------->DOF2<------NtERF2 <---------SPL7xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -TEIL --------->ARR14(2) <---------DAG2      --------->DDF1  <---------RAP2.3(3) ------>NtERF2   tggcagtcggattgccagcatccacacaccttttgaaaaaggctcgatgtcggccttctccctgggggccggatggatgatggctgccatcaacttggta  2646200                                                                           --------->ALFIN1                                                                          ------->MYC4                                                                          <-------MYC4                                                                          ------->PIF5                                                                          <-------MYC2                                                                          <-------MYC3                                                                          ------->MYC3                                                                          <-------PIF5                                                                          ------->MYC2                                                                         <---------O2                                                                         <---------TGA1a                                                                         --------->TGA1a                                                                         <---------ANAC55(2)                                                                         --------->O2                                                                         <---------ANAC46                                                                         <--------ABF1                                                                        ------>NtERF2                                                                       <---------ALFIN1                <-------PIF4                                           <------------OsbHLH66                ------->PIF4                                         ------>NtERF2                <-------MYC3                                         --------->LBD16                ------->MYC2                                         <-----------HVH21                <-------PIF5                                        --------->ANAC58                <-------MYC4                    --------->HSFB2a(2) --------->ANAC58                ------->PIF5              <------ZmHOX2a(1)         --------->ANAC46                ------->MYC3             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        ------>ZmHOX2a(2)            <-----------HVH21         <-----------ARR10      --------->ARR14(2)            <----------DOF2            <---------ARR11(3)      <---------ARR14(2) --------->AHL20(1)     <---------HSFB2a(2)<---------LBD16             ------    <------NtERF2 ----------->GT1   ===============================================bZIP_DOF   <------ <------NtERF2  <-------MYC2       <---------DAG2              --------->ARR14(2)            <xxxxxxx <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            xxxxxxxxxxxx xxxxxxxsmallRNA(se3)    <---------AHL20(1) --------->GLK1(1)  --------->ARR11(3)----------->HVH21   gtcgtcgggatcgtcgcacatgctaaaaatattagcacctttcaggacatccagacggtatacaatatctccgccacgtgtgtctgaccgtagtagtggc  2646300                                                         <------NtERF2    --------------->AGL15      <---------ALFIN1                                  <---------HSFB2a(2)       <------ZmHOX2a(1)   <---------TCP15(1)                                   --------->HSFB2a(2)     --------->MYB59   --------->PCF2                            ----------->GT1            <---------At5g28300 --->At4g35610      --------->WOX13(1)     <---------ANAC58         --------->ARR14(2)           <--- ---MYB46(3)     <-----------HVH21         <---------ANAC46         <---------ARR14(2)        ------- xxxxxxxxxsmallRNA(s)                      <---------ANAC58 <---------KAN4(2)   *TSS          ------- xxxxxxxx>smallRNA(s2)                 <----------DOF2 <---------LBD16 <-----------GT1    --------->CCA1(2)   tgaaggtcccaccagcatttgtcagtcattttcttagctatctttgcgagtaaatcgtcgggaatagtcggattcaccatgttaggaatgagataggcca  2646400                                              <------MYB83                                              <------MYB46(1)                     --------->YAB1        <-------GAMYB              ---------->ID1              --------->MYB55(2)         --------->YAB1                   <------MYB46(1)         -------->ATHB1                   <------MYB83         <---------ICU4                   <---------MYB46(3)         --------->ATHB12    --------->ANAC58--------->ALFIN1        <---------ATHB12     --------->ANAC58<---------MYB46(3)    <---------WRKY38(1)    --------->TOE2(2)<--------P ----------->GT1   --------->AHL20(2)     <---------DEAR3(2) ------ARR14(2)  <----------DOF2---------->DOF2<---------ANAC46             <---------AHL20(2) ---------->AGL1 ------>ZmHOX2a(1)       <---------DEAR3(1)    <------------CBF                   <-- ----->CBF<------------CBF --------->TOE1(2)<---------MYB52(1)<---------AtLEC2        <-----------HVH21   atatggtcaaatcattgtccttttaataaccaaggaaagagagtcggttggggagattacagttgcattgaatgttatttaagttggatgtcaaatcaga  2646500                                                         --------->DAG2                                                        ---------->DOF2                                                  <-------TEIL                                                  ------->TEIL  ------->GAMYB   <---------AHL20(2)       --------->ICU4                         <---------------AtSPL3     ------->TEIL       <---------YAB1                         <---------------AtSPL8     <-------TEIL  <---------ANAC55(2)                         --------------->AtSPL8 --------------->AtSPL8xxxxxxxxxx  --------->ANAC55(2)                      <---------ATHB12  <-----------GT1    --------->AHL20(2) ----ZmHOX2a(1)          --------->TOE2(3) --------->AHL20(2)--------->MYB52(1)--------->AHL20(2)  xx   ggataagtgattatttgagaagactaacatttatctactatatcaataaatgtacgtataaagtaacagtctacgtacatatttaattctcatatttttg  2646600                          -------->HAHB4                    <-------MYC4                          <---------ICU4                    <-------MYC2                          <--------ATHB1                    ------->MYC2                          --------->ATHB12                  <-------MYC3                            <                          --------->ATHB51                  ------->MYC4                            -                         --------->AHL20(2)                 ------->MYC3                           --                         <---------ATHB51            <-----------HVH21                             <-                         <---------AHL20(2)         <---------ANAC58                         <-------                   --------->YAB1  --------------->AtSPL8  <---------TGA1a                   --------                   --------->TOE1(3)   ------->TEIL ----------->GT1                          --------                   --------->TOE2(3)   <-------TEIL <---------ANAC58------->TEIL             <-------              <---------DAG2       <---------------AtSPL8  --------->O2                   <---------ARR14(2)              <----------DOF2      <---------------AtSPL3  --------->TGA1a             <---------TOE2(3) xxxxxxxxxxxxx>smallRNA(fl3)<---------WOX13(1)   --------->DAG2 ------->TEIL   --------->YAB1>>>>>>>ZML2 xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------------->AtSPL3  <---------O2  <-----------GT1  --------->GLK1(2)   gtgcaaaccgatgctactttatcttaaataattgataaatgtacgtctaataaggcgttacacgtgtacgtatatttacaataagcatagaggttctaga  2646700                                        --------->TGA1a                                        --------->O2                                        --------->ANAC58         --------->ALFIN1               --------->ANAC55(2)  <---------YAB1                        --------->bZIP60(2) ---------ICU4                <---------TOE2(3) -------->YAB1               --------->MYB52(1)                                                   --- ------->ICU4                <-----------GT1                                                      <-- --------ATHB51         <---------AHL20(2)     --------->YAB1                                    <--- --HSFC1(1)             --------->AHL20(2)  <----------DOF2                 ----------->HVH21  ------ ->HSFB2a(2)         <---------AHL20(2) ===============bZIP_DOF  <---------ANAC58 --------->ARR14(2) ->HSFC1(1)         --------->ICU4      --------->ANAC58         <---------ANAC58 <---------ARR14(2) --HSFB2a(2)        --------->AHL20(2)  <---------TGA1a     --------->ICU4 <---------WOX13(1) -------   aattatgacaagtggaagtgtatttattaattaacgcttggcacgtctttaataagactgacattatgcgtctattgactgacatatatgcttacattta  2646800                                                                                     <---------WRKY18(1)                                                                                  <---------ICU4                                                                                  --------->YAB1                                                                                <---------YAB1                                                                             <---------YAB1                                                                             <---------AHL20(2)                                                                          --------->ARR11(3)       --------->YAB1                                                     <---------AHL20(1) <-----------GT1                                                          --------->AHL20(1)       -- ------>YAB1                                                              <---------ARR11(3)       -- -------ICU4                                                              --------->AHL20(2)       -- ------YAB1                                       <---------MYB52(1)      <---------AHL20(2)     <--- --->YAB1                                        --------->At5g28300     --------->AHL20(2)      ---- -->AHL20(2)         --------------->AtSPL8     ------->GAMYB    ----------->RAV1(1)----------->HVH21   ttattacatttatagttagaatgtaagtacttgttagaatgtaagtacaaccgtaagtttagtttgacaacacaaatatattattcatgaccgatagaac  2646900  Previous    Next  AGI:  At2g06630.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G12120.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28482.1); similar to hypothetical protein 40.t00047 [Brassica oleracea] (GB:ABD65162.1) Range:  from: 2645685    to: 2646380    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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