Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       ----------->HVH21 <---------ARR14(2) --------->ARR14(2)                                   <---------------AtSPL8 -------HSFB2a(2)                                     --------------->AtSPL3 ------>HSFB2a(2)                                     --------------->AtSPL8                    ----- --->P<---------WRKY18(1)                     <---------ANAC58                                 ------ --ANAC58                                     <---------ANAC58                           --------->YAB1 --ANAC58      ------>ZmHOX2a(1)           <-----------GT1                        ----------------->AGL2   ccagaacttgacccttcctccaatatttgtcgaaactgttcaatttttccttgtttgaagtactccctcttcaccatagatgaaaccaaaatcagaattg  2436300                                      <------------MYB.PH3(2)                                      <---------MYB52(2)                                      <---------MYB111(1)                                      <---------MYB111(2)                                      <---------MYB46(2)                                 --------->ANAC58                               ---------->DOF2                         --------->At4g35610                        --------->ANAC46                     <---------ARR14(2)    <----------DOF2                     --------->ARR14(2)------->GAMYB                --------->ANAC58 --------->ANAC46         --------->YAB1         --------->GLK1(2) ----------->RAV1(1)         --------->WOX13(1)  --------->AHL20(2) ------>GT1     --------->ANAC58 --------->ANAC58  ----------->GT1   --------->ANAC46 ----->GT1  <----------DOF2--------->RAP2.6(2)     <---------ZAT6 <-----------HVH21   gaaaaaaaaacaatctttaagcaaatcagccacaaaagcaactaacttttgaagtgttaatcaaaacccatcagccattaactaagaaaaactcaacaaa  2436400                                               --------->YAB1                                          --------->LBD16                       <----------DOF2                                        --------->MYB46(3)             <---------------AtSPL3                  ------>MYB83         ------->TEIL                   <---------ANAC58                  ------>MYB46(1)     --------->MYB52(1)              <---------ANAC58                --------->TOE2(3)     --------->ARR14(2)           <------ZmHOX2a(1)<---------TOE2(3)                <---------MYB59     <---------MYB52(2)      ==============HOX2a_HOX2a    --------->ARR11(3)      --------->HSFB2a(2)         --------->MYB52(1)      --------->GLK1(1) <---------RAP2.6(2)      <---------HSFB2a(2)     ---------->DOF2 --------->ICU4<------ZmHOX2a(2)   =====================   actcgattccagatagaacctaattagagtggaaaagaacgaaccgcgatgatgagccagagatcgagaggagcttgttcggctttaagaatatcaagta  2436500                  <---------ZAT2                  <---------At4g35610                  --------->ZAT2                  --------->At4g35610                --------->ZAT18           --------->O2           <---------O2           <---------TGA1a                     --------->At4g35610           ===============================MYC_MYB           ==============================MYC_MYB                 --------------->AtSPL8           --------->TGA1a        --------->TOE2(3)            <---------MYB52(1)      --------->LBD16       <-----------TGA1           ------->GAMYB<---------At4g35610          --------->ANAC58       <-----------HVH21          --------->TOE1(3) --------->GLK1(1)       --------->ANAC58      <--  --------->At4g35610           -------->P  <<<<<<<<<TBF1  ------->TEIL     --------->ANAC46     ---- ====================bZIP_DOF --------->MYB46(3)    <---------GLK1(1)--------->ZAT14 <---------LBD16   tatcagaagcgtcacgagggagctgatcaagaacaaccctaacttcttcttctgaattctgaaccggtatgtacacactcgccattgcccggctaagtga  2436600        --------->GLK1(1)      <---------ANAC58       --------->ARR14(2)      <---------ANAC46                          ----------->GT1     --------->ANAC46          <---------ANAC58                    <---------ATHB12    <---------HSFB2a(2)     --------->ALFIN1                --------->ZAT18                      ----    --------->HSFB2a(2) --------->ZAT14                    <---------ANAC58                      ---- ----ZmHOX2a(1)         <---------ZAT14                    <---------ANAC58         *TSS         <--- ----->ICU4        --------->ARR11(3)                      --------->ALFIN1         --------->MYB46(3)   ggattaccagaaaccctagaagaaattgcagtggcgaatttttcgaatagagagtatgtgtgtgtgccaacgatgaagtgaatcgaacaatcgattacaa  2436700                                                                                 --------->DAG2                                                                                ---------->DOF2                                                                              --------->YAB1                                                                              <---------AHL20(2)           <---------AHL20(2)                                              --------->YAB1          <---------AHL20(2) <------MYB83                               --------->YAB1             --      <----------DOF2        <------MYB46(1)                         --------->TOE2(3)             == ----->GLK1(2)              <---------AtMYB61                       ----------->GT1    <---------TOE2(3) ----->ARR14(2)             --------->MYB59                        --------->AHL20(1)  <---------TOE1(3) ------ARR14(2)  ----------->HVH21     --------->At4g35610  <-----------HVH21 --------->AHL20(2)   <-   atctgtttcttttttatttgtgaccttggtttggtctgataagctcagataagaagttttagggtcaaatatgttaataataaaaagttaaggtaagagt  2436800                                                                    <---------MYB59                                                       ----------->GT1 --------->ARR14(2)                                               <-----------------AG --------------->AGL15                                               ----------------->AGL3  <---------ARR14(2)                           <----------DOF2     =====================================MADS_MADS            <---------ARR14(2)                 <-----------------AGL1 ------>MYB83            --------->ARR14(2)                <-----------HVH21   <-----------------AGL1    <----------DOF2    <----------DOF2     <---------ANAC58    <----------DOF2 ---->ZmHOX2a(1)    <-----------GT1        <---------ANAC46   --------->TOE2(3) ====================HOX2a_HOX2a           <---------ANAC58   --------->TOE1(3)                    -- ---------DOF2------>ZmHOX2a(2)  <-----------GT1<---------------AGL15 ------>MYB46(1)             <--   ccttttcttttttggatcggtgttactttctttttttcccacatatcgtgtcaaatatggtaaacctttaccaaatatgcaatgcgattttgaacttgaa  2436900                                                           --------->MYB52(1)                                                          <---------ARR14(2)                                                          --------->ARR14(2)          --------->AHL20(2)                           --------->ANAC46                  --------->ATHB12          <---------AHL20(2)                         --------->MYB52(1)              <---------ARR14(2)     <---------AHL20(1)                       <----------DOF2                        --------->ARR14(2)     --------->AHL20(2)                      ------>ZmHOX2a(2)                       --------->ARR11(3)     <---------AHL20(2)                    --------->ARR11(3)                --------->ATHB12<------MYB83 --------->RAV1(1)    <---------ICU4       <---------ARR11(3)               <---------ATHB12 <------MYB46(1) --------ID1   <-----------GT1    --------->AHL20(2) <---------DOF5.7(2)    <---------YAB1 <--------P   acaacaaaaaatttaaattactaatctttagccaatttttatatcgatctttagtaaacggaaacggtcttaagtcaaatgatagaatatatggttggaa  2437000      --------->TOE2(3)                   --------->ICU4                       --------->YAB1    <---------ARR11(3)    <---------GLK1(2)   <---------AHL20(2)  --------->YAB1  --------->ICU4 --------->AHL20(2) <-----------GT1 <----------DOF2   ----------->GT1    ----------->GT1   tgccattatctcaaaaaaaaaaaatcaagaatgtcatttttctaatttttaattctttgttaaactaaaaataagaaaaaatcaaaacaattggtaaaaa  2437100                                              xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                         --------->CCA1(2)                                        --------->ARR11(3)                                        <---------ARR11(3)                                      <---------YAB1                    --------->DAG2    <---------TOE2(3)                   ---------->DOF2  --------->YAB1                           <---------ZAT14              --------------->AGL15<---------ATHB12                          --------->ZAT14 <xxxxxxx          --------->ANAC46    <------ZmHOX2a(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  ------>ZmHOX2a(1)   actaaaacctagacgacccaaaaaagtattcgatccaattaagatatatgtccatcgatacaaaactcatcccaaacacttaagtgaaattcctgatttt  2437200  Previous    Next  AGI:  At2g06210.1    Description:  ELF8 (EARLY FLOWERING 8); binding. similar to SEC (SECRET AGENT), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G04240.1); similar to putative TPR-containing nuclear phosphoprotein [Oryza sativa (japonica cultivar-group)] (GB:BAC16228.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65264.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67377.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Tet Range:  from: 2428900    to: 2436684    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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