Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->YAB1                              <-----------GT1                                    <---------ICU4                            <---------DAG2                                      <---------AHL20(2)                      --------->ANAC46                                    ------->GAMYB                      --------->ANAC58                      <---------AHL20(2)  --------->AHL20(2)                      --------->ANAC58                   <---------GLK1(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                     --------->ZAT18                     <---------ARR11(3)     --------->ICU4                 --------------->AtSPL8          <---------ANAC58        --------->MYB46(3)              <---------AHL20(2)                 <---------ANAC58       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------AHL20(2) <---------ZAT18             <---------ANAC46      --------->WOX13(1) <---------YAB1  <---------------AtSPL8     --------->YAB1<---------RVE1(1)     <---------ATHB51 ------>ICU4<---------YAB1  <----------DOF2<-------TEIL  --------->ARR11(3)   --------->YAB1   atttttaatgtcttattattttgtacacaactttacctcttaagtttcatgacttgttagattttttttttgtcaaccaaaaataattagaacttaatag  2425900                            --------->ANAC55(2)                         <---------ARR14(2)                      --------->ANAC55(2)                      <---------ANAC55(2)                      <---------ANAC46                      <---------ANAC55(1)            --------->ARR11(3)                --------->GLK1(2)                                  <---            <---------ARR14(2)     ------->TEIL                                                 xxxxx            --------->ARR14(2) <---------TOE2(2)   <----------DOF2                            -------            <---------ARR11(3) ------->TEIL  <---------ARR14(2)     <-----------GT1         ---------           <------ZmHOX2a(1)<---------ANAC55(2)  <---------------AGL15                  --------->ANAC58       --------->LBD16<---------ANAC58       --------->ARR14(2) ------>MYB83        --------->ANAC58      --------->LBD16 <---------ANAC58       <---------GLK1(2)  ------>MYB46(1)     --------->ANAC46     <---------HSFB2a(2) --------->ARR14(2)----------->ARR10  <---------MYB59       --------->ANAC58 --------->WOX13(1)  <---------TOE2(3)    <--------P     <-------GAMYB ---------->ID1   --------->ANAC58   agtcaatcccgaaggatattgtttacgtatacgtatgtaacttggtagattctcttttcggttaccaaattttctcgtttttctaaacgcaaacaaaagt  2426000                             <---------AHL20(2)                         <---------AHL20(2)                         --------->AHL20(2)                         <---------AHL20(1)                   --------->TOE2(3)                  --------->ANAC55(2)                  --------->ANAC55(1)                  ----------->GT1                  <---------ANAC55(2)                  --------->ANAC58                  --------->ANAC58                  --------->ANAC46             <---------YAB1  --------->AHL20(2)            --------->AHL20(1)       ------>ZmHOX2a(1) --------->AHL20(1)     ----------->RAV1(2)<---------AHL20(2) --------GT1<---------AHL20(1)                                                             --------->TOE1(3) xxxxxxxxxxxxxxxxxx>smallRNA(i2)                                     <----------DOF2       --------->TOE2(3) ---->GT1   --------->AHL20(2)   --------->YAB1                  <-----------GT1   ----------->GT1 ->DOF2--------->LBD16  --------->AHL20(2)            <-----------HVH21          ---------->DOF2   tacaaactcctgaatataatacgtaaataaattaaacataagttatctatgccccttgtcacaaaatttagcttttaagaaggaaaagaaaaacctgaaa  2426100                                                                                                  <--                                                                                                  ---               --------->AtMYB61----------->GT1               --------->YAB1                  -------      <---------YAB1          ---------->DOF2            ----------->GT1                      -------      <---------TOE2(3)  --------->At4g35610           --------->DAG2                        <-------  <---------ANAC58       <---------At4g35610          ---------->DOF2             ---------->DOF2 ---  <---------ANAC58    ---------->DOF2      <---------TOE2(3) --------->ICU4  <------ZmHOX2a(1)<------   tggtgcttaagataaaaccaaaactaaagctgaaaagaaaattttaagaaataagaaaaaggaataataaacaagaagaggacatgaagcacagagattc  2426200           >>>>>>>>>>WRKY43           >>>>>>>>>>WRKY38          --------->WRKY38(1)        <---------At4g35610        --------->At4g35610      <-----------RAV1(2)                    ------>MYB46(1)     <---------ZAT14                         -------->P -------At4g35610                --------->AHL20(2) ------>At4g35610       <----------DOF2    --------->TOE1(2) -->GLK1(2)>>>>>>>>>>WRKY26 ------------>CBF ------>MYB83 -->ARR14(2)            <---------DAG2     <---------MYB59           <-----------GT1               <- --GLK1(2)----------->HVH21 <---------YAB1 <---------MYB111(1)------------>CBF          <----------DOF2 ------>ZAT14  --------->MYB52(1)--------->YAB1             <----------DOF2             --------->TOE2(3) ---ARR14(2) ------------>CBF   ----------->TBP --------->ZAT14     *TSS              <---------ATHB12   tgcagactgcaggtgaccaatggacactttatcaataaaaacatacctactactctcttacactttcaattttccaatacaaatcccaatctttaatctc  2426300                                                                                        --------->ARR11(3)                                                                                      ------>MYB46(1)                                                                         --------->ARR11(3)          <---------At4g35610                                --------->YAB1           ------>MYB83          <---------CCA1(2)                            --------->ANAC46  <---------ARR11(3)    <<<<<<<<<TBF1     <----------DOF2  <---------REM1(2)  <---------GLK1(2)       >>>>>>>>>MYB2 ---------DOF2  <----------DOF2 <---------AtLEC2   --------->AtLEC2    ----------->ARR10<---------ARR11(3)   tctttcttcttcatctctctttctctttctctcttcatggctacaaggattccattcacagaatcacaatgggaagaacttgaaaaccaagctcttgtgt  2426400               --------->ARR14(2)               <---------ARR14(2)        <---------At4g35610   --------->AtMYB61              <------------------------ANAC81        <---------ZAT2       --------->ANAC46              <----------DOF2      <<<<<<<<<TBF1        --------->ZAT2       --------->bZIP60(2)   ---------->DOF2           <<<<<<<<<TBF1        --------->At4g35610<---------ALFIN1  ------>ZmHOX2a(1)            <<<<<<<<<TBF1     <<<<<<<<<TBF1   tcaagtacttagctgcaaatatgcctgttccacctcatcttctcttcctcatcaaaagaccctttctcttctcttcttcttcttcttcatcttcttcttc  2426500                                                                                     <------MYB83                                   --------->ZAT18                                   <------MYB46(1)                                   <---------ZAT18                 <---------YAB1    ----------->GT1                                 <---------At4g35610             --------->YAB1     --------->MYB46(2)                         <---------ALFIN1                 <---------ZAT18   ------>ZmHOX2a(1)                        <---------ZAT14   <---------ARR11(3)<----------DOF2--------->TOE2(3)                        --------->ZAT14<---------DAG2<----------DOF2       --------->TOE1(3)                 <----------DOF2 --------->At4g35610<---------ANAC58 <-------GAMYB  <---------AtMYB61               <---------DAG2   --------->ANAC58    <---------ANAC58<---------MYB46(3)            <---------ALFIN1    --------->ANAC58<----------DOF2 <---------YAB1      <---------MYB46(3)       ---------->ARF1 <---------ALFIN1<----------DOF2    --------->ZAT18<---------YAB1   --------->ICU4   aagcttcttctctcccactctttctccacactgtaagcacactttatcttctttgctttgtgctctatgatggttatccttagggtttggtgataatgta  2426600                         <------MYB46(1)                         <---------ANAC46                         <---------ANAC58                         <------MYB83                         <---------ANAC58                        --------->MYB111(2)                        --------->MYB55(2)                        <---------MYB46(3)                                               <---------ARR14(2)                      <---------MYB52(1)                                         <---------REM1(1)           <----------DOF2                                                  <------ZmHOX2a(1)      <-----------GT1<---------At4g35610                                 <-----------RAV1(2)        -  ------->TEIL       <-------GAMYB                                <-------TEIL  --------->ARR11(3)  -   aacgaatttgactcttttttttcagttgggtggaatgtgtatgagatgggaatgggaagaaagatagatgcagagccaggaagatgtagaagaactgatg  2426700                                                                                   ------>ZmHOX2a(1)                                                                                  --------->TOE2(3)                                                                            <---------MYB52(1)                       <---------HSFC1(2)                                --------------->AtSPL3     -                       --------->HSFC1(2)                              --------->ARR14(2)        ----         <---------At4g35610 ----------->RAV1(2)                       <---------ARR14(2)     <------         <---------GLK1(1) -------->P                                 --------->MYB46(3)---------->DOF2 -------->ANAC58       --------->At4g35610  <---------ZAT6           --------->ANAC58 --------->ANAC58 -------->ANAC58 ---------->DOF2  --------->ZAT6                     --------->ANAC58 --------->ANAC58   gcaagaaatggagatgctctaaagaagcttaccctgactctaagtactgtgagagacatatgcatagaggcaagaaccgttcttcctcaagaaagcctcc  2426800  Previous    Next  AGI:  At2g06200.1    Description:  AtGRF6 (GROWTH-REGULATING FACTOR 6). similar to AtGRF5 (GROWTH-REGULATING FACTOR 5) [Arabidopsis thaliana] (TAIR:AT3G13960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65262.1); contains InterPro domain QLQ (InterPro:IPR014978); contains InterPro domain WRC (InterPro:IPR014977) Range:  from: 2426268    to: 2427320    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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