Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               ------                                                                                               <-----                                                                                         --------->TOE2(3)                                                                                         ------------                                                                                         <-----------                                                    --------->At4g35610                 <------------                        <---------At5g28300  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       -------------                   <---------ARR11(3) <---------------AtSPL3                            -------------                   <---------GLK1(2) <------------CBF        --------->ANAC58         <-----------GT1    --------->TOE2(3)  <-----------GT1--------------->AtSPL8 --------->ANAC58 --------->MYB52(1)   aaaaaacattagctatacctagattttacagttatagcaaattgtacttcaaacagctataccacgctcattttcagaaataccagttataccataaata  2410600         --------->At4g35610 ----------AtSPL3                                 --------->HSFB2a(2) --------->AtSPL8                                 <---------HSFB2a(2) ----------AtSPL8                                 <---------HSFC1(1) --->AGL15                                        >>>>>>>ZML2 ----AGL15                             <---------AHL20(2) -----AGL3         <-------MYC3        <---------ATHB51                           <---------At4g35610 ---->AGL3         ------->MYC3   --------->TOE2(3)         <---------GLK1(2)--------->TOE2(3) ---->AGL2        --------->O2    <---------MYB59 --------->HSFC1(1)    ---------->DOF2      --------   gtacttcaaacagctataccacgtttctcagttatacctaaattattctgttctagaaaattgattcttcgactaaaagcattaatctgcctaaattaac  2410700             --------------->AtSPL8             --------------->AtSPL3             --------->ZAT6        <---------ICU4--------->AHL20(2)        --------->YAB1<---------AHL20(2)       --------->MYB46(3)                                  --------->YAB1       <---------ATHB12                                   ------>MYB46(1)      -------->P   --------->TOE2(3)                      ------>MYB83                           ----     --------->WOX13(1)                                  ----------->RAV1(1)       ------------>CBF ->AHL20(2)  <---------------AtSPL8                  <-----------GT1--------->WOX13(1)           ----   tacgaatcaaccattacagtacattaaaatgtcttaatagaccgagaatacatagttaccaacataatatccatcagtttcaaataccaatttcaaacct  2410800        <---------WOX13(1)         ----------->RAV1(1)       <------------CBF      --------->ANAC46                                             -----------     <---------YAB1          --------->YAB1               <---------ARR11(3)          --------->DAG2 -->MYB46(1)        <---------------AtSPL8                --------->ARR11(3)         ---------->DOF2 -->MYB83          ---------->DOF2--------->MYB46(3)    <---------TOE2(3)         ----------->GT1   atcaaatctaattgaaatctacaaagtacaaacacaacaacacaagactagatgaattaagatgtccaaagtataagaagagaatggtaaagctcaattt  2410900                                                    <---------ARR14(2)                           <------MYB83             --------->ARR14(2)                           <------MYB46(1)         <---------HSFB2a(1)                       --------->ZAT2              <------ZmHOX2a(1)                       <---------ZAT2           <------NtERF2                  ------>NtERF2                --------->LBD16                 <xxxxxxxxxxxxxxxxsmallRNA(i)<---------LBD16                               ----------    ------->GAMYB<---------DEAR3(1)         ------->GAMYB                 <------NtERF2   --------->ETT(1) --------->MYB52(1)<------NtERF2           --------->ANAC46       <------NtERF2        <-----------RAV1(1) ->CBF         --------->MYB52(1)          --------->DEAR3(1) <---------MYB46(3)------------>CBF   gaataacggaagaaaaacgacggcgagcttggtcgatttgattcaacgccggaggattcgacgatggctgcaagtcgtcgatttcaattttgtcggacac  2411000                                                                                             <-------                                                                                           --------->ATHB51                                                                                           --------->ATHB12                          --------->ATHB12                                                 <---------ICU4                    <---------RVE1(1)                                                     --------->ICU4                    <---------CCA1(1)                                                     <---------YAB1                   --------->ARR11(3)                                                   -------------                   <---------ARR11(3)                                                   --------->TOE1(3)               --------->LBD16                                <---------AHL20(2)        --------->TOE2(3)              --------->HSFB2a(2)                            <---------AHL20(2)         <------------              <---------HSFB2a(2)                            --------->AHL20(2)         --------->YAB1             <---------LBD16  <---------MYB46(3)          <---------AHL20(2)           --------------      --------->ANAC58   <---------YAB1                  --------->AHL20(2)            <-------------      ----------->ARR10  <---------AHL20(2)         --------->ANAC55(2)                <-------------      --------->ANAC58<---------AHL20(2)         <---------AHL20(2)                    -------------- ->HVH21   --------->GLK1(2)  ----------->GT1<---------AHL20(2)                  ----------->GT1   gatgagggaagaaattctggagatttttttattggttaattttgtttttattttatgtattaaataaatggtattggtttggagagtaaaccataattgg  2411100                       ----------->GT1                     --------->SPL7                   <---------SPL7                   <---------ARR14(2)       --------->SPL7<-------TEIL       <---------LBD16<---------ANAC46     <---------SPL7--------->ARR14(2) <---------ANAC58<---------------AtSPL3 <---------ANAC58<---------MYB46(3) --WOX13(1)     <---------ANAC46 -->AGL15     <-----------HVH21 ---AGL15    --------->MYB52(2) --->AGL2   <-------TEIL                           --------->YAB1 ----AGL3  --------->ARR14(2)                 <-------TEIL                      ---------->DOF2 ----AGL2  <---------ARR14(2)      --------->ARR11(3)                       <---------YAB1 --->AGL3 <---------MYB52(1)       <---------ARR11(3)                   <---------GLK1(2)   tttgcttcgtccggttcgtcgggtacgggtaaacaaggatttttaaaattcattcagagtataagagtatatcagattataagaaagtatttagactcat  2411200                                                                 --------->ATHB12                                                                <-------TEIL                                                             <---------RVE1(1)                                     --------->ANAC58       --------->ARR14(2)                                     --------->ANAC58     <---------TOE2(3)                                     --------->ANAC46     ----------->ARR10                                 <---------ALFIN1     <---------At4g35610                        --------->ATHB12              --------->ZAT2                        <---------ICU4                --------->At4g35610                        -------->ATHB1      ----------->GT1 --------->ARR11(3)            --------->ALFIN1                       <---------ATHB12    --------->ALFIN1 <---------ARR11(3)           <-------MYC3               <----------DOF2 <---------ALFIN1  <---------GLK1(1)                       ------->MYC3           <------ZmHOX2a(1)  <---------ZAT18    --------->GLK1(1)                <----------DOF2   ttttggagagtaaggagctttataaatcattgcccacacacacaagtggagaaatcagctaagatattcattggtgttctactactttcaacgtgtgagt  2411300                                                                                  ----------->GT1                                                                              <---------AHL20(2)                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                                             --------->YAB1        <-                                                                          --------->WOX13(1)   <-----                                                                      --------->WOX13(1)   <---------                                                      <---------YAB1<---------AHL20(2)     ----------                                                    --------->YAB1  --------->AHL20(2)     ----------                      --------->YAB1       <---------YAB1        --------->AHL20(1)        <---------TOE2(3)          <---------AHL20(2)            ------>ZmHOX2a(1) <---------ZAT6<---------ATHB12   <---------         --------->AHL20(2)       <-------TEIL --------->AHL20(2)<---------ARR11(3)      ---------->DOF2   ttcaagacaaattttatgttccaattgtattccatattcatccttctcattatatcatgagtgtgaatatataaatcaattatatggtttttaaaggtac  2411400          --------->ANAC58          --------->ANAC58<---------ANAC58     <---------YAB1       <---------ANAC58     <---------------AtSPL8                                                                         -     <---------------AtSPL3   <---------AtLEC2                                                      -     <---------TOE2(3)  --------->ARR11(3)                                                          <   <---------ICU4       ------->TEIL                                             ------->GAMYB  <---- ------TEIL            <---------CCA1(2)               --------->TOE2(3)        --------->MYB46(3) <- --TEIL<---------SPL7--------->ANAC55(2)        <---------ZAT6       ------->GAMYB --------->LBD16 -- ------AtSPL3        <---------ANAC55(2)    >>>>>>>>>ARR2           --------->ANAC46           ------ ----->AtSPL3      --------->CCA1(2)       --------->ATHB12         --------->ANAC58       <--------- ----->AtSPL8     <---------ARR14(2)      <---------YAB1            --------->ANAC58      --------->ALFIN1 ------AtSPL8     --------->ARR14(2)    <----------DOF2--------->TOE1(3)      <-----------GT1  <-----   atccattatggtacgaatcagatatgtatcttgcaagactaactttgattgtgttaacctcaaatgtccaacgccatttgtaacccccaaatgtgtgagc  2411500  Previous    Next  AGI:  At2g06166.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17718.1); similar to hypothetical protein 40.t00037 [Brassica oleracea] (GB:ABD65155.1) Range:  from: 2411002    to: 2411653    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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