Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <----------DOF2                                                                          <---------MYB52(2)                                                              <----------DOF2-------->P            --                   ------>NtERF2               --------->ANAC46         --------->ZAT6             <-                  <---------ALFIN1             --------->ANAC58         --------->ANAC46          <--         --------->TOE2(3)                     --------->ANAC58       <---------ALFIN1    -----------   caatttcaattccataatcgacacctctcttagcaactctcttccctgaacgcaaactcaaaaacttttcatccacactaacctctttctcagtgacaca  2355200      ------>NtERF2      <-----------HVH21     --------->RAP2.3(3)     --------->DEAR3(1)                        <---------ANAC46    --------->RAP2.3(1)                        <---------ZAT6  --------->DEAR3(1)         --------->ZAT6 <--------P                            --------->At4g35610 ------->YAB1   <---------ANAC58         --------->LBD16                        <------ZmHOX2a(1) --------ICU4   <---------ANAC58        <---------ANAC46  <-------TEIL       <---------LBD16  ------- -------ATHB12  <---------ANAC46  <---------ANAC55(2)  <------MYB46(1)       <-----------RAV1(2)    < >HVH21<------NtERF2<---------AtLEC2   <---------LBD16 <------MYB83    <---------MYB59      <--------   atcatcgccgtcaaattggtgtgcaagacgaagactacgtctccgggtagtgtgagtgggttcatcaacaagacccaattcaggagcggtctcatccggc  2355300                                                 <---------ANAC46                                                 --------->ETT(1)                                               <-----------HVH21                                       <---------DEAR3(2)                                       ------>NtERF2<---------ARR14(2)                     <---------ZAT18  <---------RAP2.3(2)                     --------->ZAT14  <---------DEAR3(1)            <---------ANAC58                     --------->ZAT18 --------->ATERF1(1)            <---------ANAC58  --------->At5g28300<---------ZAT14<---------ATERF1(1)             <---------ANAC46        --------- ----------->GT1     <---------SPL7----------->HVH21--------->ARR14(2)  <---------ANAC58    <-------- -->LBD16      <----------DOF2     --------->ETT(2) <---------GLK1(2)   <---------ANAC58--------->GLK1(1) ---------DEAR3(1)  <---------ZAT6 <---------WRKY38(1)         --------->ALFIN1<-----------RAV1(2)<-- -LBD16 <---------ARR14(2)        --------->ATERF1(1)   <----------DOF2 <---------ANAC46<---------GLK1(1)   gagcggtgaagttcgggctctagtgtacgagcgggagtcgacggctcagtgtcggattctttagggagtggcttgggtgagacagatgggatttcgcgag  2355400        <-----------TGA1                                             <------ZmHOX2a(1)        <-----------HVH21                                           <------MYB83       --------->YAB1                                               <------MYB46(1)     --------->GLK1(2)                                            <--------P >HSFB2a(2)              <---------LBD16                       --------->MYB59              <------ZmHOX2a(1) -HSFB2a(2) --------->AtLEC2                 <------ZmHOX2a(1) <---------TOE2(3)      <------ZmHOX2a(1) ----ZmHOX2a(2)    --------->YAB1---------->DOF2               <---------TOE1(3)<------ZmHOX2a(1) <--   atcgaagaatcgtcatggaaattgtaatctggagagaaagggagagaggagggtttatgagggtttaggtaggagaagaagaggaagaggaagaggaaga  2355500                                                        *TSS                                                        ------------>CBF                    --------->AHL20(2)             --------->MYB46(3)                ----------->GT1                    --------->DEAR3(2)                <------MYB83                      -------->P              <--------P                          ------>MYB83              <---------MYB52(1)                <---------ALFIN1             <-------GAMYB                      --------->DEAR3(1)            <---------DEAR3(2)                  --------->MYB46(3)            <------MYB83                       <------NtERF2            <------MYB46(1)                   ------>NtERF2            --------->MYB55(2)               --------->ANAC58            <---------MYB46(3)               --------->ANAC46           <---------DEAR3(1)               <---------LBD16         <-----------HVH21              --------->ARR14(2)                                     <-----         ------------>AtMYB77          <---------ARR14(2)                                 -----------       --------->HSFB2a(1)      <-------GAMYB--------->ANAC58                            --------->ANAC58       <---------HSFC1(2)      <---------MYB46(3)------>NtERF2<---------ANAC58           --------->ANAC58       <---------HSFB2a(1)     <-----------RAV1(1)------>MYB46(1)                       --------->LBD16       --------->HSFC1(2) <---------TOE1(3)<---------ANAC58   <---------ANAC58       ------>MYB46(1)    <------ZmHOX2a(1)     <---------TOE2(3)<---------ANAC58 --------->ICU4           ------>MYB83 <-- ----ZmHOX2a(1) <------MYB46(1)--------->MYB52(2)--------->MYB52(1)     ------>ZmHOX2a(1)--------->ANAC46   ggaagaggaagggtcggttggataaattagggtttgttgccgatttcgcgccaaccgatgcaatgcttgttttcctcttctcttaccatccgagcaattt  2355600                                         <------------CBF                                        --------->ATHB12                     <---------TOE2(3)  <---------ICU4            --------->YAB1              -------->ATHB1                                    <----------         --------->YAB1            --------->AHL20(2)                                <---------YAB1         <---------ICU4            <---------AHL20(2)                               <---------AHL20(2)         -------->HAHB4     --------->ANAC46                --------->LBD16     <---------RVE1(1)        <---------ATHB51    --------->ANAC58               <---------ANAC58     <---------CCA1(1)   --------->ANAC55(2)      --------->ANAC58               <---------ANAC58    --------->ARR11(3)  -- ----ARR11(3)      <---------AHL20(2)  <---------ATHB12    <---------ANAC46    <---------ARR11(3)---- ->CBF  --------->ICU4      --------->AtLEC2        <------------CBF  <---------LBD16<---------AHL20(2) --------DOF2     --------->AHL20(2)<---------AHL20(2)    ------>ZmHOX2a(2)  ----------->ARR10   <---   cttttacttaataatggtcatttaatgttcacgcaaattaaatcattggctagaaattgatccgtggcacatctcggattagatatttttattaacaaat  2355700                                                                                            <--------                                                                                          ------->MYC3                                 --------->AHL20(2)                                       ------->MYC2                                 --------->AHL20(1)                                       <-------MYC3                                 <---------AHL20(1)                                       <-------MYC2                             <---------AHL20(2)                                          --------->O2                            --------->AHL20(1)                                           <---------O2                         --------->AHL20(2)                                              --------->TGA1a                         <---------AHL20(2)                                              --------->ANAC55(2)                     --------->AHL20(2)     <---------YAB1                   --------->AHL20(2)             --------->ANAC55(2) <---------AHL20(2)  <---------YAB1       --------->YAB1 <---------ANAC55(2) -GT1     <---------AHL20(2)<---------AHL20(1) --------->AHL20(2)    <---------YAB1      <---------TGA1a -------->DOF2      <---------AHL20(2)  --------->TOE2(3)          --------->YAB1        <---------ANAC58 ----->AHL20(2)     <---------YAB1    --------->ARR11(3)          <---------AHL20(2)     <---------ANAC58 ------AHL20(2)    <---------AHL20(1) <---------ARR11(3)          --------->AHL20(2)   <-----------GT1   taaaagttttattttaagtaatattatttatatattttattatcttatttttaatatgatttttaaaatttataattcataaaatagtttcacgtgtcaa  2355800                                                             ---------->DOF2                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                    <---------AHL20(2)                                                 --------->AHL20(2)                                                 <---------AHL20(2)                                                <---------AHL20(2)                      --------->AHL20(2)                <---------YAB1               <---------AHL20(2)               <---------ARR11(3)            --------->ARR11(3)               --------->AHL20(2)               --------->ARR11(3)       ------>ZmHOX2a(2)                    --------->AHL20(1)                --------->AHL20(1)     --------->ARR11(3)                     <---------AHL20(1)               --------->RVE1(1)     <---------ARR11(3) ----------->HVH21   <---------AHL20(2)               --------->CCA1(1) ---HVH21   <---------GLK1(2)----------->GT1--------->AHL20(2)         --------->AtLEC2 <---------AHL20(2)   actaatcgatcttagattttgatagtttgacaggtattaaacaaaatttatttatttatttaacaaagaaactatgcaaatatcttatatataatttcaa  2355900                      --------->AHL20(2)                      --------->YAB1                  XXXXXXXXXXXXXXXXXXXX>MIR4243                 <------ZmHOX2a(1)          --------->YAB1                ----------->GT1           --------->AHL20(2)               <---------TOE2(3)         --------->YAB1           --------->YAB1            <---------AHL20(2)         --------->AHL20(2)    ----------->GT1      --------->AHL20(2)     <---------ARR11(3)--------->YAB1            <-----------GT1      --------->AHL20(1)    --------->RVE1(1) --------->AHL20(2)    --------->CCA1(2)      <---------AHL20(2)<---------YAB1  --------->AHL20(2)         --------->ARR11(3) --------->AHL20(2)  --------->ICU4 --------->AHL20(2)             <---------ARR11(3)           -----   aaatgaaataaaataataaggaaattataaatatcgtattaaataaaaataaaaattttaaaacacatagatatataacaaaactatacatatatatcct  2356000                                                          --------->AHL20(2)                                                          --------->YAB1                                                      <---------YAB1                                                      --------->AHL20(2)                                                      <---------AHL20(2)                                                     --------->AHL20(2)         <---------AHL20(2)                                                     <---------AHL20(2)      --------->AHL20(2)                                                   <---------YAB1            <---------AHL20(2)      --------->AHL20(2)                     --------->AHL20(1)    <---------AHL20(2)     <---------AHL20(2)                      <---------AHL20(1)    <---------AHL20(1)     --------->AHL20(2)           --------->YAB1  <---------AHL20(2)     <---------YAB1    <---------AHL20(1)      --------->HSFB2a(2) <---------YAB1     --------->AHL20(1) --------->AHL20(2)         <---------HSFB2a(2) <---------AHL20(2)--------->AHL20(2) ->ZmHOX2a(1)    <-----------RAV1(1)      --------->AHL20(2)      --------->YAB1--------->AHL20(2)   atataaaataattttaaaaatgttgttgttctacaaacataaaaaaaaatattattttaattatacaattatattctaattttttaatatagattactaa  2356100  Previous    Next  AGI:  At2g06040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G21900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65254.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553) Range:  from: 2352151    to: 2355556    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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