Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <------MYB83                                                                                     <---------ANAC46      xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      --------->ARR11(3)      <------MYB46(1) --------DOF2                                        <---------AtMYB61              <---------AtMYB61 ----ARR14(2)                                   <------MYB46(1)                     --------->MYB111(1) --->ARR14(2)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --------->MYB46(2) --->GLK1(2)                 >>>>>>>>>GT-1      <------MYB83 <---------AGP1   <------ZmHOX2a(2) ----ARR11(1)             ----------->GT1      --------->MYB59<------ZmHOX2a(2)     --------->MYB59 ->TEIL<------NtERF2     --------->DAG2        <---------AtMYB61   <---------WOX13(1)----------->GT1 >ANAC58               ---------->DOF2       <---------MYB52(1)------>ZmHOX2a(2)  <---------MYB52(1) >ANAC58            <------ZmHOX2a(2)   --------->MYB52(1)   --------->AGP1  <---------ARR14(2) --AtSPL3         <------ZmHOX2a(1)    --------->RVE1(1)     <---------ARR11(3)------>ZmHOX2a(2) --AtSPL8       <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->ARR14(2)   cttttgggcagagaagtttaggatcaaaaggtaaatctaaaatatcggtttggttttggtttagatctaattgaattcggatcggtttggtataaatttt  2332100                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                        ----------->GT1                                                                      <---------LBD16                                                                      <---------ANAC46                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                           --------->ARR11(3)                                                           <---------ARR11(3)                --------->ARR14(2)                        --------->CCA1(1)                <---------ARR14(2)          <---------ARR14(2)       <---------LBD16        --------->HSFB2a(2)     <---------MYB52(1)        --------->RVE1(1)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <---------HSFB2a(2)    ----------->GT1    <---------ANAC46<---------GLK1(1)  <----------DOF2  --------->ANAC46         --------->ARR14(2)   <---------ARR14(2)  --------------->AGL15      <---------LBD16<---------ARR11(3)   <---------GLK1(2)  <---------------AGL15      <---------ANAC46    <---------LBD16 --------->ARR14(2)   --------->GLK1(1) <-----------------AGL3     <---------LBD16 <---------GLK1(2)<---------LBD16   --------->RVE1(1)   tagactttttttggaacatatactcaaattttcgggtaattacccagatttttcggataaatatctggattttcgggtaaaatatcagatttctagtgaa  2332200                                                                                                   --                                                                                                   <-                                                                                                   --                 --------->AHL20(1)                                                           <------ZmHOX2a(1)                 <---------AHL20(1)                                                          --------                 --------->ARR11(3)                                                          <-------                 <---------ARR11(3)                                                    ------>ZmHOX2a(2)              --------->AHL20(1)                                   <---------ANAC58   ===============HOX2a_HOX2a              --------->AHL20(2)                    <---------GLK1(2)                 <------ZmHOX2a(2)              <---------AHL20(2)         --------->ARR14(2)        <---------ANAC46  <---------ARR14(2)   --------->ARR11(3)                    <---------ARR14(2)        <---------LBD16   --------->ARR14(2)   <---------GLK1(2)      <---------RVE1(1)         --------->ARR14(2)            <---------TOE2(3)<-   <---------ARR11(3)    <---------MYB52(1)         <---------ARR14(2)  ---------->DOF2==============HOX2a_HOX2a <---------TOE2(3)     <---------TOE2(3) <---------GLK1(2)         <---------ANAC58 <------ZmHOX2a(1)   atttagatttttcaaataaaatattcaggtatttttgagttcggattcgagtcggattcggactcgatttcgggtaaaggaatttaggatccaataggaa  2332300                                               <---------GLK1(2)                                               --------->ARR14(2)                                            ----------------->AGL1                                          <---------ARR14(2)                                          --------->ARR14(2)                                        <------MYB46(1)                                        <------MYB83                                        <---------DEAR3(2)                                        <---------MYB46(3)                                       <---------DEAR3(1)              <-------TEIL            <--------P ------->GLK1(2)                     <-----------HVH21 --------ARR11(3)                 <---------ANAC58 ------->ARR11(3)                 <---------ANAC58 --->GT1    <---------ARR14(2)    <---------ANAC46                                              <---- ---ID1<---------MYB52(1)      <----------DOF2 <---------ARR14(2)                               <---- ----------ARR10             xxxxxxxxxxxxxxxx>smallRNA(s)      <---------ANAC46              <-------   aaatcttcggtttggatacagttttgggtccaactttcgggtcggttccgattcggataatcgattcgggtgttttttgcccagccttactaccgctttc  2332400                               <---------TOE2(3)                              <-----------GT1                         <---------AHL20(2)                         <---------AHL20(1)                         --------->AHL20(1)                         --------->AHL20(2)                                  ----------->GT1                      <---------ICU4                                        <---------DEAR3(1)                      --------->ATHB51                                     --------->SPL7                      <--------ATHB1                                      ------>NtERF2                      <--------HAHB4                                   <---------LBD16                      -------->HAHB4                        --------->AHL20(2)      --------->LBD16 --------->YAB1                       --------->YAB1<---------SPL7    <---------LBD16  --------->ICU4 <---------AHL20(1)    --------->AHL20(2)<---------MYB46(3)   --------->MYB52(1)<---------ATHB51                 --------->AHL20(1) --------->LBD16 -----ANAC58         --------->AHL20(2)         --------->YAB1       <-----------GT1 -----ANAC58         <---------YAB1 --------->AHL20(1)--------->AHL20(2) ------>NtERF2 ---DOF2           --------->YAB1   <---------ARR11(3)<---------AHL20(2)<---------RAP2.6(2)----------   ttgaacaccggagtttttgcataataattaattaacaatatatcagacaaacaaaataaaataaaaatatgtttccggccggtgtaatttgtctgcaatc  2332500                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC46                                                                                           <---------TGA1a                                                                                    =================MYC_MYB                                                                                    ------->GAMYB                                                                                 --------->MYB52(1)                                                                                <---------WRKY38(1)                                                                                <---------WRKY12                                                                              <-----------HVH21                                                                      --------->HSFB2a(2)  <---------O2                                                                      <---------HSFB2a(2)  --------->TGA1a                                                                  --------->ANAC55(2)      <---------ANAC58                                              <----------DOF2     <---------ANAC55(2)      <---------ANAC58                                        --------->WOX13(1)        <---------ANAC58<---------At4g35610                                      ------------>CBF            <---------ANAC58--------->At4g35610 <---------ZAT14                      <---------ATHB12<---------GLK1(1)     <---------ARR11(3) -->CBF  --------->YAB1    --------->TOE2(3)*TSS      --------->GLK1(1)     --------->ARR11(3)    <--   gacttctctgatcaaaatgttgacataaatctcaaatcgaatcaattactttagagatttcccaaattccgtctcgaagatgtcaacggagagacgtgct  2332600                                                                 <-----------GT1                ------>MYB46(1)       <---------ARR11(3)     <<<<<<<<<SARD1                ------>MYB83          --------->ARR11(3)     <<<<<<<<<CBP60g             <---------At4g35610          <---------ATHB12           <---------CCA1(2)      ------>MYB46(1)         --------->YAB1    <---------ARR14(2)    --------->ANAC58                  ------>MYB83       <---------ATHB12    --------->ARR14(2)    --------->ANAC58                <---------MYB59  --------->AHL20(2) -------ANAC46 --------->MYB52(1) ------->TEIL      --------->YAB1       <----------DOF2 --------->At4g35610   tcgtcgaatccaatgaccaacgaagagaacgctatgtatatatctcttacgctctcataaccaaatttctctcttctttaaatcaattttaagctgaaat  2332700                                  <---------AHL20(2)                         <---------ARR14(2)                         --------->GLK1(2)                         --------->ARR14(2)                        <---------CCA1(2)                        <---------GLK1(1)                     >>>>>>>>>>FUS3                                                               <--                     >>>>>>>>>>ABI3                                  ----------------->AGL3       <--                    --------->ANAC58                      <---------ANAC58               <-----------GT1                    --------->ANAC46           <---------MYB52(1)   ------->TEIL <-----------GT1  <--                    --------->ANAC58     <---------ANAC58 <---------ANAC46  --------->DAG2     <-----                    --------->AtLEC2     <---------ANAC58 <---------ANAC58 ---------->DOF2>>>>>>>>>>>   ttcgatttgggtttcattttccatgcaaatctgtattaaaaatgcttcccttattcagtttcttgttatgaaccaaaaaaagtttacatttttaccaatg  2332800                                                     --------->ANAC58                                                     --------->ANAC58                            <---------ANAC46   <-----------HVH21                      <---------AHL20(1) --------->ATHB51--------->ARR11(3)                 <--------                      --------->AHL20(1) --------->ATHB12--------->GLK1(2)                  ---------           <------MYB46(1)  <---------AtLEC2  <------MYB46(1)                              <---------     <----------DOF2  --------->ARR11(3)<---------MYB52(1)                                 <--------- -------ANAC46  <---------ANAC58        <---------YAB1  --------->GLK1(1)                  <--------- -------ANAC58  <---------ANAC46        --------->ICU4<------ZmHOX2a(1)      <---------HSFC1(2) -------ANAC58  <---------ANAC58    ----------->RAV1(1) <---------GLK1(1)    --------->HSFC1(2) ----ATHB12<------MYB83     <---------ANAC58  <------MYB83  --------->HSFB2a(2)   --------->TOE2(3) >>>>>>LFY<---------TOE1(2) <---------ANAC58 --------->MYB59<---------HSFB2a(2)<-----------GT1   gtgtgttctttgtaggttccttgatatattgcatgaagcaccattatttggtcacaggaaatctagaagccttgttggaagttacctctatatgcttcta  2332900         <----------DOF2                                                             <---------ARR14(2) -------AGL15                                       <----------DOF2                  --------->ARR14(2) ------>AGL15            --------->AHL20(2)       <---------ANAC58  <----------DOF2<------MYB83   --- --------AGL1        <---------YAB1     --------->YAB1 --------->YAB1   <-----------GT1 <---------YAB1 --------AG <---------YAB1    ----------->GT1     <---------ANAC58 <---------DAG2  <------MYB46(1)<-- --------AGL3     <----------DOF2<-------TEIL<-----------RAV1(1)<-----------GT1  <-----------RAV1(2)   ttggcaagtttcttttgattcttttgattatatggttcatatgcataatgttgcctttgatagtttttgcctttttacattaggcaggttatgctatttt  2333000  Previous    Next  AGI:  At2g06005.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G20580.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G20580.2); similar to unknown [Populus trichocarpa] (GB:ABK93352.1) Range:  from: 2332544    to: 2336153    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version