Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------WOX13(1)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                        XXXXXXXXXXXXXXXXXXXX>MIR3440B-3P                                      <---------YAB1                                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                              --------->AHL20(2)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <---------ATHB12                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <xxxxxxxxxxxxxxxxsmallRNA(i)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    ----------->RAV1(2)--------->ATHB12                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <xxxxxxxxxxxxxxxxsmallRNA(s)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  --------->TGA1a     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  ============================================bZIP_DOF                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            --------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->DAG2        <---------HSFB2a(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       --------->At4g35610      --------->At4g35610<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->MYB52(1)     ------>ZmHOX2a(2)      <---------At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <-----------GT1       <------ZmHOX2a(2)     --------->ALFIN1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)---------->DOF2            --------->CCA1(2)    --------->ZAT18<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<----------ID1               <---------ARR11(3)  <-------MYC3   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxxsmallRNA(s)   <---------AGP1  ------->MYC3   <xxxxxxxxxxxxxxxxsmallRNA(s)       --------->DAG2                  --------->AGP1 -------ATHB12 <xxxxxxxxxxxxxxxxsmallRNA(i)        ---------->DOF2                  --------->ARR14(2) ---->P --------->HSFB2a(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    <---------ARR14(2) -->MYB83xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ANAC58                    --------->ARR11(3) -->MYB46(1)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC58    <----------DOF2<---------CCA1(2) -->MYB46(3)--------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------DAG2----------->ARR10   accatgtgtgctggaagcactcgtctgggcaatgaaatgtatgattggccaagaaaagcgaaaagtaacgctttttataaactgtagatctgatgaagat  2321900                                                        <---------ARR11(3)                                                    <------ZmHOX2a(1)         ----------->RAV1(1)           ---------->DOF2  --------->ARR11(3)            --------->ZAT6  ------->TEIL       ----------->RAV1(1)         <---------LBD16          <---------AHL20(2)   gatgtattttccaacaaaatggccaacattcgctacatacttaaagacgattcaggaagatagtgatgagtttgatttttttgatttatctctaatgctt  2322000                                           --------->CCA1(2)                                          <-----------ARR10                                    --------->KAN4(2)                                   <---------HSFB2a(1)                                   --------->KAN4(1)                                   --------->HSFC1(2)                                   <---------KAN4(1)                                   --------->HSFB2a(1)                                   <---------HSFC1(2)                                  <---------KAN4(2)                              <---------ANAC55(2)                              --------->ANAC58                              --------->ANAC46                              --------->ANAC55(2)                              --------->ANAC55(1)                              --------->ANAC58                             <-------TEIL --------->ARR14(2)                             <---------LBD16                            --------->ARR14(1)                                                 <-----                            --------->CCA1(2)               <---------ARR11(3)             --------->AHL20(2)         --------->TOE2(3) --------->ARR11(1)          <---------YAB1                     <---------WOX13(1)         ----------->GT1   --------->ARR14(2)    ------->GAMYB               <----------DOF2  <------        ----------->GT1    <---------ARR14(2) <-----------GT1<---------YAB1  <---------DAG2<---------AHL20(2)  ----------->GT1        ----------->ARR10<---------ARR14(2)--------->ARR11(3)          --------->ATHB12   cgaaatgtaaatgttaaaacagaccactagatacggaatgttcggatataaccacatatgattatctttgtaaacaatactttttagcattgatttatta  2322100                                                                                                 <---                                                                                                <----                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                           <---------TOE2(3) <-------                                   --------->DAG2                          <---------TOE1(3)---------                                  ---------->DOF2                         ---------->DOF2 <---------LBD16                              --------->ANAC58                    --------->MYB52(1)  ===============                     --------->ETT(1)                 ----------->GT1----------->GT1  =============== ----AHL20(2) --------->DAG2  --------->ANAC58    --------->DAG2 <---------ARR14(2)   <------ZmHOX2a(1) ---YAB1     ---------->DOF2--------->MYB52(1)   ---------->DOF2 --------->ARR14(2)<---------LBD16---   tttgagttaatctaataaagttgtcggaaaaaacggaaaagtgagaagagaaaaagtcgaaaattcagaaacggtttaaagttaaccaggattccggttt  2322200                       <------------CBF      --------->ARR14(2)      <---------ARR14(2)   <----------ID1                                                    ------>ZmHOX2a(1) <-----------GT1     <---------YAB1                                                     --------->HSFB2a(1) ------YAB1     <---------MYB52(1)                                                      <---------HSFC1(2) -------TBP  ------>ZmHOX2a(2)             <---------GLK1(1)                            <---------HSFB2a(1) --MYB52(1)<---------ARR14(2)              --------->GLK1(1)                            <---------At4g35610 >LBD16    --------->ARR14(2)              <---------bZIP60(1)                          --------->HSFC1(2) ===================HOX2a_HOX2a            --------->bZIP60(1)                 =====================HOX2a_HOX2a ==================HOX2a_HOX2a--------->ANAC58         *TSS                    ------>ZmHOX2a(2) ------>YAB1<------ZmHOX2a(2) --------->ANAC58  <---------ANAC55(2)   <---------ALFIN1  <---------ZAT2   ttataacagaaccgatcggttttgtaattgagacgaaaacttctgatatcacttaaaaacttcacagaaacaacacctcgatctcatcgaagctcctctc  2322300                               ------>MYB46(1)                               ------>MYB83                             <---------MYB59                          ------>MYB83                          ------>MYB46(1)                        ------->GAMYB                        --------->AtMYB61                                 <---------TOE1(2)                        <---------MYB59                                   <---------TOE2(2)                       --------->MYB46(3)                             ----------->HVH21       --------->YAB1 -------->P                                 --------->ANAC58   <-----------GT1  --------->ANAC55(2)--------->WOX13(1)                          --------->ANAC58 <-----------GT1   tcttacatatcatcacttcacatcaaccaaacctacttctgtctctctctctcgctctctatctctcacgctctcacaggtttttttctctctctgtctc  2322400                                                                                                  <--                                                                                                -----                                                                         <---------LBD16       <-----                                                                        <---------ANAC46      <------                                                                        <-----------RAV1(1)  <-------GAMYB                       <---------MYB52(1)                          <<<<<<<<<MYB2            <--------               <---------ANAC46             ----------->GT1     <---------AtMYB61      --------->ARR11(3)               <---------ANAC58         <---------YAB1 <---------At4g35610             <---------ARR11(3)               <---------ANAC58      --------->GLK1(2) --------->At4g35610            <---------CCA1(2)   tctcttgttctccatttgcgtctctgtttgtttgatgagtttctgaatgttaaatgcagatgtgttttggttttctgtggaagtttttatatctctgttg  2322500                                                                            --------->ZAT14                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                  <---------ANAC55(1)        <-------                                                                  --------->ANAC55(2)      <--------- -------WOX13(1)                                                  <---------ANAC55(2)      ========== ---->ATHB12                   --------->AHL20(2)                 <---------ANAC46  ------>ZmHOX2a(2) ----YAB1        <-----------RAV1(1)                        <---------TOE2(3)      <---------At4g35610 ---MYB52(1)     <---------MYB46(3)                         <---------TOE1(3)<---------AtLEC2-------- ---RAV1(1)   <-----------RAV1(1)                           --------->MYB59 <---------ZAT14--------->TOE2(3)   attgagtttttctctgatgttgttgggctccaaaaaattcgaaacttgtattatctctcgtttaggtttcgtgttctctgcattgatctgcttctttaat  2322600                ------->TEIL             <---------O2             --------->O2             --------->ANAC58             <---------TGA1a             --------->ANAC55(1)             --------->ANAC55(2)             <---------ANAC55(2)             ===============================bZIP_DOF      --------->ATHB12                       <---  <-----------GT1        --------->GLK1(2)                <---------ICU4                   --------->ZAT14 --AHL20(2)  --------->TGA1a                              --------->YAB1                   <---------ZAT14 -DOF2--------->ZAT14    <---------ARR11(3)  --------->ZAT6--------->TOE2(3)     --------->GLK1(1) ======================bZIP_DOF        <---------MYB46(3)--------->ICU4          <---------GLK1(1) ->AHL20(2)  --------->ANAC58    <----------DOF2         <---------ATHB12     <---------TOE2(3)  <---   ttgttaactatactcacgtatgtgaaaaatctgaactttgtttgttaactctaatccaaatcattagaaaaatgcagattgagatttctctaatgcagtg  2322700                              <---------TOE2(3)                                   --------->TOE2(3)                             --------->YAB1 <---------ZAT14                 ------>ZmHOX2a(2)                          --------->YAB1    <---------ZAT18                <---------At4g35610 ------ANAC58        <---------ANAC58       --------->ZAT14        <---------TOE2(3) <---------AHL20(2) ------ANAC58        <---------ANAC58       --------->ZAT18     <----------DOF2<---------GLK1(2)    <   cttgaaattttggaaactagggttcttgttataatgtttcaagtagtgaacttatgtcaacttgtgctttaggtttgatctgattcttaaattttgtttc  2322800  Previous    Next  AGI:  At2g05990.1    Description:  MOD1 (MOSAIC DEATH 1); enoyl-[acyl-carrier-protein] reductase (NADH)/ oxidoreductase. similar to enoyl reductase [Brassica napus] (GB:CAA64729.1); similar to enoyl-[acyl-carrier protein] reductase [Brassica napus] (GB:CAC41367.1); similar to enoyl-[acyl-carrier protein] reductase [Brassica napus] (GB:CAC41366.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358) Range:  from: 2322255    to: 2325143    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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