Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  ------>NtERF2                                                               --------->ANAC46                                                               --------->ANAC58                                                     <---------ARR14(2)                                     ---------->DOF2<------ZmHOX2a(1)                                  <---------HSFB2a(2)--------->ARR14(2)                           --------->At5g28300    <---------TOE2(2)                       --------->MYB52(1)         <---------TOE1(2)                      ===============================HOX2a_HOX2axxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      <------ZmHOX2a(2)       --------->HSFB2a(2)                      =====================================HOX2a_HOX2a                     --------->ARR11(3)       <---------HSFB2a(2)    <---------GLK1(2)              <    --------->ZAT18 <---------At4g35610       ------>ZmHOX2a(1)<xxxxxxxxxxxxxxxxsmallRNA(i)--------->LBD16 ----ANAC58         --------->bZIP60(1)      --------------------->WRI1                  ----------->RAV1(2) ----ANAC46         --------->At4g35610--------->ANAC58        --------->ANAC58       <------ZmHOX2a(1) ----ANAC58         <---------bZIP60(1)--------->ANAC58      <------ZmHOX2a(1) <-----------HVH21  ---   tggaagcgcattgaaacaagtgagatcacggtgaatcgagaaagcatcctcgaaggattcgaaggacgccagattagtcatggtcataggaccctgagac  2263400                                                  <---------TOE2(3)                                               --------->MYB46(3)                                        --------->ZAT18                                        <---------ZAT14                  <---------HSFB2a(2)                                        <---------ZAT18                 <---------LBD16                                        --------->ZAT14              --------->ARR14(2)               --------->YAB1        --------->At4g35610             <---------GLK1(2)              <---------ATHB12       <---------ZAT2                  <---------ARR14(2) <---------TOE2(3)                   <---------At4g35610             --------->ARR11(1)             < ---------DOF5.7(2)                  --------->ZAT2    --------->At4g35610--------->LBD16          -- ------>DOF5.7(2)        <---------------AGL15-------->P      --------->YAB1                     <---   gttaacgaaggaatcaatgataagtttctcaacatagagagctgcactaaccaaggtagcacaataacaaggattcgggagactatggtgctatagtcga  2263500                                                              --------->DOF5.7(2)                                                             --------->TOE2(3)                                                             --------->TOE1(3)                                                       --------->YAB1                                                  ------------>CBF        --------->ARR11(3)                                             <---------AHL20(2)          <------ZmHOX2a(1)         --                                             --------->AHL20(2)  <---------TOE1(3)                 <-        <----------DOF2                      <---------AHL20(1)  <---------TOE2(3)                 <- <---------YAB1                              --------->AHL20(1) <---------DOF5.7(2)             <xxxx ---------TOE2(3)                           <---------ATHB12 <----------DOF2              --------->ICU4 ------->YAB1             --------->DAG2------------>CBF  <---------ARR11(3)            <---------At4g35610 ------WOX13(1)   ---------->DOF2    --------->At4g35610  --------->ARR11(3)     <---------YAB1 <----   ttgatgatagctttgaaacccaaagcgaaaggtttagacatctccaataaaatgcaataagaactttaacgtttaggaacttgatgatggagatgatggt  2263600         <---------ANAC58         <---------ANAC46         <---------ANAC58     <---------At4g35610    --------->ANAC58    --------->ANAC58   --------->SPL7                                                         ----------->RAV1(1)   --------->ZAT18                                                        --------->RAP2.6(2)   <-------TEIL                                                          <----------ID1 <---------SPL7                                                      ---------->DOF2 --------->ARR14(2)                                                --------->ETT(2) <---------ARR14(2)                                            --------->ALFIN1 --------->ARR10                                         <xxxxxxxxxxxxxxxxsmallRNA(i) --------TOE1(3)                         --------->YAB1--------->ANAC58--------->ANAC58 --------------AtSPL8             <------------CBF     --------->ANAC58--------->ANAC58 xxxxxxxxxxxxxxxxsmallRNA(si3)--------->At4g35610<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------- -----REM1(1)                 <---------At4g35610<---------------------WRI1               <xxxxxxxxxx   gaaggtacgctgcttgagagcgacgctcgatgagctaattggagcataatggtcgataagcacaagtggtcgaaagccacaaaaaacacttcggcacaat  2263700                                                                                         --------->CCA1(2)                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                   ------------>CBF                                                                              --------->KAN4(2)                                                                              --------->ARR14(2)                                                                              <---------ARR11(3)                                                                              <---------ARR14(2)                                                                              --------->ARR11(3)                                                                             <---------KAN4(1)                                                                             <---------HSFB2a(1)                     --------->ARR14(2)                                      <---------GLK1(1)       <---------RVE1(1)                                                     --------->HSFB2a(1)       <---------CCA1(1)                                                     --------->GLK1(1)      <---------ARR11(3)                                                     <----------TaMYB80      --------->ARR11(3)    --------->ANAC58                                 --------->KAN4(1)   --------->HSFB2a(2)      --------->ANAC58                                ---------->TaMYB80   <---------HSFB2a(2)<-------TEIL               --------->ANAC58           <---------KAN4(2) --->CBF       <------ZmHOX2a(2)                 --------->ANAC58         <------ZmHOX2a(1)   ------- xxxxxxsmallRNA(i)<---------TOE2(3)            ---------->DOF2         <---------LBD16  <---------ARR11(3)   cggttcgagatatttcgatcaaggttcttcaagcctttgtaaacataccataagcccctaaatacaactaaaaccaggaatatcccacaatatatgcaaa  2263800                                                                          <---------ANAC46                                                                          <---------ANAC58                                                         --------->ARR11(3)                                                         --------->ARR14(2)             <---------YAB1                              <---------ARR14(2)           ----------->GT1                               <---------ARR11(3)      ------------>CBF                      --------->ANAC58              <---------ANAC58      <----     <<<<<<<<<<<<<<<<<LFY                   --------->ANAC46          --------->MYB59         ------- --------->ANAC58                           --------->ANAC58      --------->ANAC58            ------- --------->ANAC58       ----------->HVH21  <---------LBD16<------ZmHOX2a(2)         <---------TOE2(3) --->DOF2  --------->YAB1                --------->MYB46(3)       --------->ANAC58  >>>>>>>>>MYB98   gtcaagacaacaatggtgataactctctcacatggagtccataaccacggattagagaagatcgacacaagttatgtcttggatttaacatagaaataaa  2263900                                                                            ---------->DOF2                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                         ----------------->AGL2                                                                         ----------------->AGL1 <xxxx                                                                        <---------------------WRI1                                                                      <------MYB46(1)        <-------                                                                      <------MYB83          <--------                                                                     --------->ALFIN1       ---------                                                                    <--------P              <-------TEIL                                                           --------------->AGL15         <------MYB46(1)                                                           <---------------AGL15         <------MYB83                             ----------->GT1              ===========================================                           --------->ARR11(3)             <-----------------AGL2        --------->MYB111(1) -----TOE2(3)            <---------YAB1         <---------ANAC58    --------->ALFIN1    --------->MYB59 -->MYB52(1)             <---------TOE2(3)      <---------ANAC58   <-------GAMYB        xxxxxxxxxxxxx --->DOF2     <---------AHL20(2)          --------->ATHB12----------------->AGL3   ---------->DOF2   ggaaacagacctgaatttttttgtcttaagatagttaatccaattgatgggcttgggccttctaaatagggttgggccaaaagaagaaagtaggtccact  2264000                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                                                                                         --------->REM1(1)                                                                                       xxxxxxxxxxxxxx                                                 ------>NtERF2                         ----------->RAV1(1)                                                 --------->RAP2.6(2)            ----------->HVH21                                                <---------RAP2.6(2)             --------->WRKY38(1)                                      --------->DAG2              xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<-                                    ---------->DOF2              <---------ANAC46xxxxxxxxxxxxxxxxxxxx                                   <------ZmHOX2a(1)         <---------ANAC58  --------->At5g28300 xx      --------->TOE2(3)           --------->ANAC58  --------->WOX13(1)      <---------LBD16        -- xxxxxxxxxxxxsmallRNA(i)     --------->ANAC58   <---------ATERF1(2)     xxxxxxxxxxxxxxxx>smallRNA(i) --ALFIN1                    --------->ANAC58--------->ALFIN1<---------ANAC58<---------ANAC46      -- -WRKY12                  ----------------->AGL1<---------DEAR3(1)xxxxxxxxxxxxxxxx>smallRNA(i)  ----- >ZAT18          <----------DOF2  --------->ANAC58<------NtERF2xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<--- ===========================================MADS_MADS  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <------ xxxxxxxxxx>smallRNA(i2)  ----------------->AG  --------->ATERF1(2) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   gggaaaaaccctagtttctctttggaatgccaagacaggaaaggggagaggcggcaatctgaagcttgcgaagacaattgcggtgactgcaacatctccg  2264100              ------>NtERF2              --------->LBD16             <---------ANAC46                                         ----------->HVH21          <---------DEAR3(1)                                         ==========================HOX2a_HOX2a          ------>ZmHOX2a(2)                                          ------>ZmHOX2a(2)        --------->ARR14(2)                                          <------ZmHOX2a(2)        --------->ARR11(3)                                          ===========================HOX2a_HOX2a        <---------ARR14(2)                                          --------->CCA1(2)        <---------ARR11(3)                                         <---------ARR11(3) <---------WOX13(1)                  --------->ANAC46              --------->ARR11(3) xxxxxxxxx>smallRNA(fl3) --------->ATERF1(1)                       <---------AGP1 --------MYB46(3)       <xxxxxxxxxxxxxxxxsmallRNA(i)               <---------ARR14(2) xxx>smallRNA(fl3)      ----------------------->TaNAC69(2)         --------->AGP1 xxxxxxxxxxxxxx>smallRNA(i)         ------>ZmHOX2a(2)              --------->ARR14(2) ------->MYB55(2)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------CCA1(2) ------->ATHB12    <---------HSFB2a(1)--------->LBD16     <xxxxxxxxxxxxxxxxsmallRNA(i)          ----- ---->LBD16 <---------LBD16     ----------->HVH21 <xxxxxxxxxxxxxxxxsmallRNA(i)          <------ZmHOX2a(1) ------MYB52(1)<------NtERF2   <xxxxxxxxxxxxxxxxsmallRNA(i)    <-------TEIL         <---------TOE1(1) ---LBD16<------ZmHOX2a(2) ------>NtERF2         ---------->DOF2 ----------->ARR10  <---------TOE2(1)   gtgattggaagatcggcgggaacagtcgctggccgtgatccgaaactgagacaaagctccaagggttcagatctgaagcgagggctacgaggaagaaatg  2264200                                                      <---------At4g35610                                                      --------->At4g35610       --------->GLK1(1)                            ------>ZmHOX2a(2)     ----------->GT1       <---------GLK1(1)                           <------ZmHOX2a(2)     <---------------AtSPL8      <---------ARR14(2)                          --------->ARR11(3)     --------->ALFIN1      --------->ARR14(2)                          --------->ARR14(2)   <---------bZIP60(2)     <------ZmHOX2a(1)                            <---------ARR11(3)   <---------ANAC46   <---------TOE2(3)                 --------->ANAC55(2)              <---------AtMYB61 ---------->DOF2   <---------TOE1(3)           <<<<<<<<<TBF1      <---------ARR14(2)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->CCA1(2)       <----------DOF2  <---------YAB1          --------->O2      --------->TOE2(3) ------>GT1             <---------ICU4    --------->ICU4          <---------O2     ----------->GT1   gagataaggatttgccagataactcatcttttcttcttcacttgatgatgaagatcggctgagaagcgaagtgaggtggtacaaaacgtttaaagaggtt  2264300  Previous    Next  AGI:  At2g05915.1    Description:  unknown protein Range:  from: 2263813    to: 2264262    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version