Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC55(2)                                                       --------->ANAC46                            <-                                                --------->ARR11(3)                                 --      ---------->DOF2                           <---------ARR11(3)                                 <- ---------YAB1                                  --------->GLK1(2)  ---------->DOF2          <-------- ------->AHL20(2)                        <---------AHL20(2)        --------->YAB1          <---------AHL20(1) ---->AtSPL8                   <---------YAB1  --------->RVE1(1)  <---------ATHB12         --------->AHL20(1)   tttttataaaaagtttgttcttgttagaagagtctaattgtattttaaaaaatctataagtaataccaataaagagagtttgtataggggatatatattt  2244100                                                                                                    <                                                                                                   <-                                                                                                 ----                                                                                               ------                                                                      <---------------AtSPL8  <------                                                                    --------->YAB1         <------MYB46(1)              --------->WRKY12                                    --------->AHL20(2)       <------MYB83              --------->WRKY38(1)                            --------->LBD16               <---------MYB46(3)             <---------MYB52(1)     ----------->ARR10       <---------HSFB2a(2)          <---------ANAC46 --------HSFC1(1)      --------->ZAT14                      --------->HSFB2a(2)          <---------ANAC58 ------->HSFB2a(2)     <---------ZAT14       <---------TOE1(2)--------->ANAC46           <---------ANAC58 --------HSFB2a(2)     <---------ZAT18   <-----------GT1<---------ANAC58               <---------MYB46(3) -AHL20(2)  <-------GAMYB       <------ZmHOX2a(1)       <---------ANAC58              --------->ALFIN1   tctagaggtacctccgttgaaccagagcacaagaggagtagatttactaggtttgatggcttccacaaaataatagtacaaaaaccgagtggctggttcg  2244200                                                       <---------ZAT2                                                       <---------At4g35610                                                       <---------HSFC1(2)                                                  --------->LBD16                                                  <---------HSFB2a(2)                                                  <---------LBD16                                                 <---------LBD16      ------>ZmHOX2a(2)                                                <---------LBD16       ===============HOX2a_HOX2a                                              <---------SPL7         <------ZmHOX2a(2)                                          <---------HSFB2a(1)        ================HOX2a_HOX2a                 <---------ZAT14          --------->HSFC1(2)        --------->AGP1                 <---------SPL7           <---------HSFC1(2)        <---------AGP1              --------->MYB52(1)          <------MYB46(1)           --------->ARR11(3)             <---------ALFIN1             <------MYB83 --------->HSFB2a(1)            <---------MYB55(2)            --------->HSFB2a(1)       <---------ARR11(3)            --------->MYB46(3)           <---------AtMYB61         <---------CCA1(2)     ----------->RAV1(1)               <---------MYB52(1)         ----------->ARR10 <---------RAP2.6(2)                   <------NtERF2   --------->At4g35610 ---------At5g28300                   <---------SPL7   --------->HSFC1(2)              --------->ANAC58 --------DOF5.7(2) --------->SPL7     <---------RAP2.6(3)   <---------HSFB2a(2)      ---------->DOF2 ----->DOF5.7(2) --------->ZAT14      --------->LBD16  <---------HSFB2a(1)    ------>ZmHOX2a(1) --->MYB52(2)------->GAMYB           <---------HSFB2a(2)    --------->HSFB2a(2)---------->DOF2 -TEIL --------->bZIP60(2)          <---------LBD16   ----------->ARR10<----------DOF2 --------->ANAC58   tttacggccacataaccaccgtactgtctgaaactaatgccggaaggttgtccggggagcttctcgattagatctttctccttaagcgaaagcacatttt  2244300                                 <<<<<<<GRF7                               ----------->HVH21                             <---------TGA1a                             --------->At4g35610                             ----------->RAV1(2)                             --------->TGA1a  ------>ZmHOX2a(1)                             --------->ANAC55(2)                             <---------O2    <---------ALFIN1                             <---------At4g35610                             --------->O2<---------At4g35610                             <---------ANAC55(2)        <---------ANAC58                           <-----------GT1<---------ARR14(2)                    <---------ANAC46     <---------ZAT2 <---------ANAC46      --------->YAB1<---------ANAC58     --------->ZAT2 <---------ANAC58    --------->MYB52(1)   <-----------HVH21--------->ARR14(2)                                  <------  <---------MYB52(2)<---------ANAC58     --------->At4g35610                           <---------GLK1(1)   cgcgactaacagaattgaagtggcttgtgtcacctgacaaaccagctcctcccttgtggcttggaaaatgtgtttggctactacaatggatttgtgatgc  2244400                                     <---------ATHB12                                    ------>MYB83                             --------->ANAC58                             <---------ANAC55(2)                             --------->ANAC55(2)                            <---------LBD16                          --------->WRKY18(1)                   ---------->DOF2  ------>MYB46(1)            <------ZmHOX2a(1)--------->ANAC58                                       *TSS   <---------TOE2(3)    --------->MYB52(1)   <-----------HVH21---------->ID1  <---------YAB1      --------->At4g35610 ---YAB1   ----------->GT1----------->HVH21     <-----------GT1               --------->CCA1(2)  ----   tagagacaacgataggaaaatacaagcggtcacggaccaatcttgttgttttcccattctattatttctgagtacgagagagatgaaaggtttaagaaat  2244500                     <---------AHL20(2)                  <---------ARR11(3)                  --------->AHL20(1)                  --------->ARR11(3)                                            =====================                 --------->CCA1(2)                                              =====================                --------->ARR11(3)                    <---------ZAT6            --------------->AGL15          <---------AHL20(2)                   <---------------AGL15            <---------------AGL15         <-----------TBP                       --------------->AGL15      <----------DOF2     <------NtERF2<---------AHL20(1)           =================================================MADS_MADS ----->ATHB12   <---------ARR11(3)          <-----------GT1   <-----------GT1 <-----------TBP      <-   gaatggcagcattttatagatatatttttggtgttgacaactatttttactatatagtgtttttaaacgatgtgttctttttttatatttagcaaaacaa  2244600                                                                            ------------------------>ANAC81                                                                         <------ZmHOX2a(1)          --------->At5g28300                                      --------->DAG2        --------->ZAT6                                            ---------->DOF2       <---------At5g28300                                      --------->HSFB2a(2)   <----------DOF2                <-----------GT1               <---------HSFB2a(2)  --------------->AGL15       <---------AHL20(2)                --------------->AGL15  ==============================================================================MADS_MADS  <---------------AGL15       --------->AHL20(2)                <---------------AGL15              -- ----------------->AGL1  --------->AHL20(2)                    ----------------->AGL3              -- ----------------->AGL2  <---------AHL20(2)                    ----------------->AGL1         ------- ===============================================================================MADS_MADS     ------- =================MADS_MADS  --------->AHL20(2)                ----------------->AGL2         ------- ----------GT1          --------->AHL20(2)                     ----------------->AG   --------->YAB1   tataccttttacagtaactcttgagattaaatttaaaaaccctatattttgggttttggggtttttccaaaagtaggaaaacaaacaaacaaaatcaaga  2244700         --------->TGA1a         --------->O2         <---------TGA1a                                                               ----------->GT1         --------->ANAC46                                                            <---------ANAC46         <---------O2                                                                <---------ANAC58 ------->ANAC58                                                                   <---------ANAC46 ------->ANAC58      --------->ANAC46                                         <---------ANAC58 -->ANAC46           --------->ANAC58                                         <---------ANAC58 -->ANAC58           --------->ANAC58                                ---------->DOF2 <---------ANAC58 -->ANAC58       ----------->RAV1(1)----------->GT1          ------>ZmHOX2a(1)<-------GAMYB         -   cacggccattcacgtctggcaacaagaaacaacttgcaatgtaaattctgatgtctctgcatccttcttcgcaaaggctgggttgtgtcttgttaattta  2244800                                                                           <---------ICU4                                                                         <---------AHL20(2)                    <-------GAMYB                                       --------->YAB1            ---                   <---------MYB46(3)          ----------->HVH21       <---------YAB1             <--              <----------DOF2         ----------->HVH21              --------->YAB1              ----            <---------YAB1           <---------WOX13(1)             <---------YAB1           <-------           --------->ARR11(3)       --------->ARR14(2)             --------->AHL20(2)        --------           <---------ARR11(3)   <------ZmHOX2a(1) --------->ZAT6--------->YAB1        <----------DOF2  <----------ID1   ----------->GT1  <---------ARR14(2)       --------->TOE2(3) <---------ZAT18   ---- --------->DOF2   <---------TOE2(3)<------ZmHOX2a(1)         <----------DOF2   --------->ZAT18   <---   gataaagacaaattatctttgtggttaaatataaggaggattgacagaaatgacactaaaaaactttaatattataaaaattgcacttcttttgaaactt  2244900      <---------At4g35610   ---------->DOF2                          --------->YAB1 ------------>AGL15                    --------->AHL20(2) -------------AGL15                --------->AHL20(2)                                        -------- ------------->AGL3         --------->HSFC1(1)                                               -------- --HSFC1(2)                 --------->HSFB2a(2)                                            ---------- ->HSFC1(2) ---------->DOF2 <---------HSFB2a(2)---------->DOF2                       <---------AHL20(2) ------------->AGL2       ------>ZmHOX2a(1)<---------AHL20(2)                       --------->YAB1 -- --------------AGL2  <-----------GT1<-----------GT1                                --------->AHL20(2)   ccaaatatagcagacaaagtttttaatcctctagaaattaactaaataataaagttttttggtactatttgtgtcaattcccaaaataaaaatgaaagca  2245000  Previous    Next  AGI:  At2g05850.1    Description:  SCPL38 (serine carboxypeptidase-like 38); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 38 precursor (SCPL38) [Arabidopsis Thaliana] (GB:Q9ZUG3); similar to SCPL36 (serine carboxypeptidase-like 36), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G52000.1); similar to SCPL37 (serine carboxypeptidase-like 37), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G52010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40748.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 2242678    to: 2244484    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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