Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->MYB52(2)                                                                       ----------->GT1                                                                       <---------MYB46(3)                                                                 --------->LBD16                                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <---------YAB1                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         xxxxxxxxxxxxxxxx>smallRNA(i)                                                     <------NtERF2<------NtERF2                                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                   <---------ANAC58  <---------MYB52(1)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                   <---------ANAC58<---------ANAC46                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               ------>ZmHOX2a(2)<---------RAP2.6(2)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                               xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                              <xxxxxxxxxxxxxxxxsmallRNA(s)                                              <------ZmHOX2a(2) <---------DEAR3(1)                                              xxxxxxxxxxxxxxxx>smallRNA(i)                                             --------->ARR14(2) <---------ANAC46<---------TOE2(3)                                             <---------ARR14(2) <---------RAP2.3(2)                                             <---------ARR11(3) <---------RAP2.3(3)                                             --------->ARR11(3) <---------RRTF1(3)                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       ==============HOX2a_HOX2a<---------RRTF1(2)                                       ===============HOX2a_HOX2a<---------RAP2.3(1)                                       ------>ZmHOX2a(1)<xxxxxxxxxxxxxxxxsmallRNA(i)                                      --------->TOE1(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <---------ANAC58           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    --------->AHL20(2)          <---------ANAC58           ------>ZmHOX2a(2) <xxxxxxxxxxxxxxxxsmallRNA(s)     <----------DOF2          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)------>NtERF2---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->AHL20(2) ----ANAC58              <---------MYB52(1)<xxxxxxxxxxxxxxxxsmallRNA(i)--------->MYB46(2)         --- ----AtLEC2      <---------ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------AHL20(2)      <-- ----ANAC58      <---------ANAC58 xxxxxxxxxxxxxxxx>smallRNA(i) <---------LBD16<---------AHL20(2) ----   tgttcttcttttacttgtttcgtttcagttcgttcttgatcctgcaagatcgggcgtcttctcattgcggcgttagttaattaaagtattttgtgcaaaa  2233700                                                      <---------AHL20(2)                                                      --------->YAB1       <---------ANAC55(2)                                                      --------->AHL20(2)   --------->ANAC58                                                     <---------YAB1        --------->ANAC46                                                   --------->YAB1          ----------->GT1                                                   <---------ICU4          --------->ANAC55(1)                                                  --------->AHL20(2)       --------->ANAC55(2)     <---------ANAC58                             <---------AHL20(2)       --------->ANAC58     <---------ANAC58                             --------->ICU4 <---------AHL20(2)  <-----------GT1                                 <---------ATHB51--------->AHL20(2) ------>AHL20(2)         <-----------GT1         <---------AHL20(1)  --------->AHL20(2)      <------- -------AHL20(2)     <----------DOF2             --------->AHL20(2) --------->YAB1        <---------ICU4 ----->AHL20(2)      <---------DAG2       <----------ID1        --------->AHL20(2) ----------->GT1   aaaatttccgtccaattttgcaactttatactctatgtccaaaaaaaacaaaataattatatgaaatttaaaataatacgtaatatagtcaatttttaca  2233800                                                      ----------->GT1                        --------               --------->TOE2(3)                  <---------AHL20(2)                        <--------              ----------->GT1                    --------->AHL20(2)                      --------->AHL20(2)              --------->ANAC46                   <---------AHL20(2)                      <---------AHL20(1)   --------->ANAC55(2)                <---------AHL20(2)            <---------CCA1(2)    --------->AHL20(1) <-----------GT1                      --------->AHL20(2)          --------->YAB1 --------->ATHB12 ----GT1    <---------DOF5.7(2)       --------->AHL20(1)   <-----------GT1      <---------YAB1      -   attttacatattgtaaacgtaaaaacatttgtttttgaaattttttaaaaaataaatagttaaactactcatatcaagaattttgatttgatatattatt  2233900                                                                 <---------ICU4                                                                <---------YAB1                                               --------->AHL20(2)<---------AHL20(2)                                   --------->AHL20(1)           --------->ICU4                                   <---------AHL20(1)         --------->YAB1                                   <---------AHL20(2)        --------->AHL20(2)                                  --------->AHL20(2)         <---------AHL20(2)              --------                              <---------AHL20(2)        <---------AHL20(2)                -----------                   <---------ICU4 <---------AHL20(2)   --------->AHL20(2)           --------->TOE1(3)       <---------AHL20(2)     --------->AHL20(2)       <---------AHL20(2)          ----------->GT1      --------->AHL20(2)     --------->AHL20(2)<---------AHL20(2)-------->HAHB4    <---------ANAC46 ->AHL20(2)        --------->YAB1 --------->YAB1   --------->AHL20(2)             <---------TOE1(3) -AHL20(2)         --------->AHL20(2)    <---------ANAC46    <---------YAB1       <---------TOE2(3) -------->YAB1  --------->YAB1--------->AHL20(1)   <---------AHL20(2)            <-----------GT1   tatcaaaatttaaaagtttaataatatcaaaaaaaattatattgtgtatttttttaattttatataattattctgcattcttttaacgtgaaatgtaaag  2234000                                             --------->TOE1(3)                                             --------->YAB1       --------->LBD16                       --------->TOE2(3)    ----------->RAV1(1)                --------->YAB1  ------>NtERF2                      <------------CBF  <---------At4g35610              <---------YAB1                                        *TSS  --------->At4g35610             --------->ARR11(3)                                   <---------AHL20(2) -->DOF2                          <---------ARR11(3)                          <---------WOX13(1) >GT1 <-----------RAV1(2)        --------->YAB1       <---------YAB1         <------------CBF   ttgcagccccagggagtattttagagttttttcgaagataattgtaatcttaacttattatttcaagggtattttgggagattgactatttttttttggg  2234100                                                            --------->ANAC58                ---------->DOF2                             --------->ANAC58            ---------->DOF2    --------->YAB1      <------ZmHOX2a(2)              <---------LBD16        <----------ID1      --------->HSFB2a(2)  <---------At4g35610        <-----------------AGL1   <---------ANAC46  <----------DOF2   <----------DOF2  --------->ANAC46    <-----------------AG   ttctgtcttgaagacaaagaaagctttcttctataatacatctttctctacagatcacacagaagcaaaaattccatctccgatttcggaagagagttgt  2234200                                         ----------------------->TaNAC69(2)                                        <---------MYB46(3)                                      <------NtERF2                                     ------>NtERF2                                    <---------DEAR3(1)                                   --------->RAP2.3(1)                                   <------NtERF2                                  <---------DEAR4(2)                                  <---------ORA47(2)                                  <---------RAP2.3(1)                                 <---------RAP2.3(2)                                 <---------DEAR3(1)   --------->bZIP60(2)                                --------->At4g35610   --------->bZIP60(1)                                <---------At4g35610   <---------bZIP60(1)                                --------->ATERF1(1)   --------->O2          <------MYB83                             ==========================HOX2a_HOX2a          <------MYB46(1)                             ===========================HOX2a_HOX2a        <---------AtMYB61   <-----                             <------ZmHOX2a(1)    <-----------HVH21      <---------MYB52(1)   <------                       --------->At4g35610       ------>ZmHOX2a(2)      --------->LBD16       <------MYB83                       <---------At4g35610      <------ZmHOX2a(2)     <---------LBD16         <------MYB46(1)             >>>>>>>>>TBF1--------->At4g35610<---------YAB1     <-----------GT1  <---------CCA1(2)   tctcttctctgagaagaagaagatgagcagaggaagcggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtcggt  2234300                                                                    <---------GLK1(2)                                                                    --------->ARR14(2)                                                                 <---------ANAC55(2)                                                                 --------->ANAC55(2)             ----                                                                 <---------ANAC46              ------                                  <---------AHL20(2)            <---------LBD16               -------          <-----------GT1     --------->AHL20(2)              <---------ARR14(2)              -------   <---------ATHB12     ---------->ID1    <---------LBD16     --------->ARR14(2)             <------- ------HVH21     <----------DOF2  --------->AHL20(2)    <-----------GT1             <----------DOF2 ---DEAR3(2) <---------CCA1(2)<---------AHL20(2) <---------WOX13(1) <---------ARR14(2)  ---------->DOF2   cagtaatcaatttctctatcttttttgtttttttaatttataacttcggagattgatattactggttacggattttgtagagtatgctttcaaagccgtg  2234400                                                                        <-----------HVH21                                                                        <---------MYB52(1)                                                                     <---------LBD16                                                                   --------->ARR14(2)   <---------At4g35610                                             <---------ARR14(2)   <---------ZAT2                                                <---------HSFC1(2)   --------->At4g35610                                           <---------HSFB2a(1)   --------->ZAT2                                                --------->HSFB2a(1) ------>DOF2                                                     --------->HSFC1(2) ----->HVH21               <---------TOE1(1)                   ---------->DOF2    <----------DOF2 -->At5g28300           <---------SPL7 <-------TEIL        --------->At4g35610  ------>ZmHOX2a(1) -->LBD16               <-----------HVH21           <---------MYB52(1)<---------ANAC46      ------>ZmHOX2a(1) --ANAC46           ------>ZmHOX2a(2) --------->GLK1(2)<---------ANAC46--------->LBD16<-----------GT1   aaagcagctggaatcacatcgatcggtgtccgagggaaagattcagtatgcgtcgttacgcagaagaaagttccggtgagtcctcttttgactccttagg  2234500                                        --------->ATHB12                                   <---------YAB1                                 --------->At4g35610                               =============================HOX2a_HOX2a                               ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                              <------ZmHOX2a(2)             <----------DOF2                              ==============================HOX2a_HOX2a                              --------->At4g35610        --------->ANAC58      ------->TEIL                              <---------At4g35610        --------->ANAC58      <-----------ARR10                             <---------ARR11(3)      =====================HOX2a_HOX2a <---------DAG2                             --------->ARR11(3)      <------ZmHOX2a(1)        <---------CCA1(2)                             --------->ARR14(2)     --------->ANAC58    <---------ZAT14<----------DOF2          --------->ALFIN1   <---------ARR14(2)     --------->ANAC58    --------->ZAT14<---------DAG2   gtttttgttcaagtgagggttttgaattagggatctgatgaatgatttgtgggcaggacaagcttttggatcagtctagtgtatctcaccttttccctgt  2234600  Previous    Next  AGI:  At2g05840.1    Description:  PAA2 (20S PROTEASOME SUBUNIT PAA2); peptidase. Identical to Proteasome subunit alpha type-6-B (PAA2) [Arabidopsis Thaliana] (GB:O81147); similar to PAA1 (20S proteasome alpha subunit A1), peptidase [Arabidopsis thaliana] (TAIR:AT5G35590.1); similar to Proteasome subunit alpha type-6 (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1) (GB:Q9XG77); contains InterPro domain Proteasome alpha-subunit, conserved site; (InterPro:IPR000426); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 2234089    to: 2236291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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