Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                      --------->ANAC58                                        <------                                      --------->ANAC58                                        -------                                      --------->ANAC46                                        -------      <---------ANAC58              ---------->DOF2                                           -------      <---------ANAC58            <----------DOF2                                        --------->ANAC46      <---------ANAC55(2)       ------>MYB83                                          <---------ZAT14      --------->ANAC55(2)     <---------MYB111(1)                                     --------->ZAT14    --------->AHL20(2)        <---------MYB111(2)            --------->TOE2(3)        <---------REM1(2)    <-----------GT1          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 --------->SPL7 ------HVH21                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)               --------------->AtSPL3 ------TGA1   ----------->HVH21 ------>MYB46(1)           ----------->RAV1(1)--------->MYB52(1)   cacaaattacttatctctgacacattttgctaccaactttaagcaatctctcatcaatagcaacattaagactcatagctatcggtactacacagaagct  2170100                    --------->LBD16                                        --------->ARR11(3)           ----------->GT1                                                 <---------ARR11(3)   <----    --------------->AGL15                                              <---------ICU4           -----    <---------------AGL15  <-------TEIL                               --------->ICU4            -----    <----------DOF2 ------>ZmHOX2a(1)                                <----------DOF2           <----- ---HSFC1(2)    --------->ARR14(2)                             --------->MYB52(1)     <---------LBD16 ---HSFB2a(1)   <---------ARR14(2)                          ----------->ARR10------>ZmHOX2a(2) ------ -->HSFC1(2)<------ZmHOX2a(1)    <---------ANAC58     <---------WOX13(1) <---------YAB1--------->ANAC46 -->At4g35610   --------->GLK1(2)<---------ANAC58---------->DOF2--------->DEAR3(2)   <---------ALFIN1 -->HSFB2a(1)   --------->ARR11(3)              --------->AHL20(2)--------->LBD16   <---------REM1(2)   tccattctttatgaggaaaatcctgaatattcatcgcttgctcttgaaaataaaagattgatgagaaccggcattatgatctcgtctccacggagcgatg  2170200                                                   --------->ANAC46      --------->HSFB2a(1)                          --------->ANAC58      --------->HSFC1(2)                          --------->WOX13(1)      <---------HSFC1(2)                        <---------ATHB12           <---------YAB1  --------->DEAR3(1)                   --------->ZAT14                    --------->YAB1 --------->DEAR3(2)                <---------TOE1(2)                   <----------DOF2 -----ICU4                   <----------DOF2  --------->GLK1(1)        --------->TOE2(3) ---->ATHB12              ------>NtERF2<---------ZAT14             --------->MYB46(3) ---->YAB1            <-----------GT1 <----------DOF2         <------ZmHOX2a(2) ----YAB1         <----------DOF2 ===================================HOX2a_HOX2a           ---------- --->ICU4       <---------ATHB12  ------>ZmHOX2a(1)--------->ANAC58<---------MYB111(2)--------->YAB1   attaccgacgcttctccaatctttttgcctcctttcctcggtttactgaaatcaagcaagttcgatccaacaactttaatattggtattcatgaggttac  2170300                      --------->ARR11(3)                    <---------YAB1                  --------->YAB1                  <---------ICU4                                                      ------>MYB46(1)                 --------->ICU4                                                       ------>MYB83            --------->ANAC58                                                         --------->ORA47(1)            --------->ANAC58                                                        ------->GAMYB           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                     --------->DEAR3(1)           --------->RAP2.6(3)                       --------->HSFB2a(1)           --------->MYB46(3)          --------->ARR14(2)                         <---------HSFC1(2)            --------->DEAR3(2)          --------->MYB52(1)                         --------->HSFC1(2)            <------------AtMYB77          <---------ARR14(2)           <---------DEAR3(1)                        ------>MYB83       <---------------AtSPL3         <---------At4g35610     <---------ZAT2     --------->MYB52(1)      <------ZmHOX2a(1) ------>ZmHOX2a(2)--------->At5g28300  <---------At4g35610------>MYB46(1)    <---------TOE2(3) <---------ARR11(3)----------->GT1<----------DOF2         --------->AtMYB61 ->GT1=========================HOX2a_HOX2a <---------MYB46(3) --------->ZAT2   <---------MYB59  -----   aaggttgaggaagaacggcatcatgatcccgtctcaatggagcggtgattaccgaagctttctcagcttgttatctccaaacctaaccgaccatagaacc  2170400        ------>MYB83        ------>MYB46(1)                                  --------->GLK1(2)        -------->P                                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <xxxxxxxxxxxxxxxxsmallRNA(s)                    --------->ARR14(2)      ------->GAMYB<---------MYB52(1)                 ----------->ARR10      --------->AtMYB61                           ------>NtERF2     --------->MYB46(3)                           --------->LBD16     <---------MYB55(2)                          <---------RAP2.6(2)    --------->ANAC58                             <---------ATERF1(2)                             ----    --------->ANAC58                             <---------ANAC46                  <-----------HVH21   --------->WOX13(1)                            --------->ATERF1(2)               <-----------TGA1  <---------WRKY38(1)                            <---------DEAR3(1)   <-----------GT1       <-------- <<<<<<<<<WRKY6   <-------GAMYB <---------At4g35610<------NtERF2<---------MYB52(1)--------->bZIP60(2) --------->WRKY18(1)--------->WRKY38(1)         --------->RAP2.6(3)<---------YAB1 --------->ANAC46<-- ---->TOE2(3)    <---------ANAC46               <---------LBD16<-------GAMYB ----------------------->TaNAC69(2)   atagtcaaccaactccttgccgttgagcaactcaagctcacccttctcatgccggcgagaacctcggttatgaaaccatcttcaacgtcacctcgtctct  2170500                                                               ===================================bZIP_DOF                                                               --------->TGA1a                                                               --------->O2                                                               <---------O2                                                  --------->ANAC58                                                  --------->ANAC58    <---------WRKY18(1)                   --------->KAN4(2)    ===================================bZIP_DOF   --------->WRKY12                     <------ZmHOX2a(2)   ----------->HVH21   --------->WRKY38(1)                  <---------YAB1 ----------->HVH21 ------->HVH21                         <---------ARR11(3) <---------bZIP60(1)                  ------ -CCA1(2)     ---------->ARF1    <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------TGA1a             ---------- -------WRKY18(1)     --------->WRKY12 --------->ARR11(3) --------->bZIP60(1)          <----------DOF2   tgaccttgaccaatttgtctcccattgacttactcgtggaagatcattcgactagccatgacctcacatgtctcaaaacgcttaatagcctttgtctcaa  2170600                                     <---------ICU4                                     --------->ATHB51                         <---------DAG2               <-----------HVH21    --------->ICU4                                    <---------YAB1              --------->DEAR3(1)    <---------YAB1                                 <---------YAB1   <---------AtLEC2      --------->TOE2(3)   <------------CBF--------------------->WRI1   --------------------->WRI1     --------->YAB1             <----------DOF2   <----------DOF2      - ---->DOF2  <---------At5g28300  <---------YAB1    <------ZmHOX2a(1)           <---------DAG2       < >ID1      <-----------GT1     --------->WOX13(1)<---------TOE2(3)          <-----------GT1 <--------   agttttcatgaattcaccgtcgtctcaccttatctatcataatttggcattgaggaatgccttctttgtttgtattttaaactttatgatttttgtgtta  2170700                          <---------AHL20(2)                          --------->AHL20(2)                                                ---------                  <<<<<<<<<<MYB80                                                    <---------TOE2(3)                 <------MYB83                                                    <------------CBF                <---------AtMYB61                                               --------->ATHB12  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                    ---------->DOF2 <---------TOE2(3) ----->ZmHOX2a(1)<------MYB46(1)                                    --------->AHL20(2)    <---------DOF5.7(2) ----------DOF2 --------->MYB59    --------->YAB1      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->MYB52(1) -ZAT6   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->DOF5.7(2)   tccttttttgtacttggtttggtttgatttaaatgaatgaaaataagttgttttaaaaaaaaaaaaaaaaaaaaatgaaaagtcattgaagttaacgtcg  2170800                                                                       <---------ANAC46                                                                       <---------ANAC58                                                                    <---------MYB52(1)            --------->TOE1(3)                                     <---------ANAC58            --------->TOE2(3)                                 <----------DOF2    <---------GLK1(2)            ----------->GT1                                 <---------YAB1      *TSS     ------->GAMYB                              <-----------GT1   <---------ANAC58--------->GLK1(2)   --------->RAP2.6(3)                      --------------------->WRI1 <---------ANAC58    <---------ANAC58  --------->MYB52(1) --------->GLK1(2)      <----------DOF2<---------ARR11(3)<---------MYB52(1)  <-----------GT1 ------------>CBF     <------NtERF2     --------->DOF5.7(2)<-------GAMYB  <---------ANAC58 >ANAC46   ----------->GT1           <---------DEAR3(1)  <---------MYB52(1)<---------MYB46(3)   catttaacggcaaacgttaaaacaatctattttgaaacgtcgtcgtcttttgactcttcgttatctttccgtttcgtctgttagattctgttttcgtagc  2170900                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   --                                                                    --------->HSFB2a(2)          ----                                        --------->AtMYB61           <---------HSFB2a(2)          <---                                     <---------ALFIN1             <------ZmHOX2a(2)           <------                                <------NtERF2                 --------->HSFB2a(2)             ------>NtERF2                               ------>NtERF2                  <---------HSFB2a(2)     ---------->DOF2                              --------->At1g77200          <---------MYB52(1)<---------DEAR3(1) <----               --------->LBD16--------->DEAR3(1)          <---------SPL7     --------->ANAC46--------             <---------LBD16 --------->RAP2.3(1)       <---------At5g28300  <---------LBD16  <-------   <----------DOF2      --------->ARR14(2)         --------->At4g35610  <-----------ARR10   ---------  <---------ANAC58      <---------ARR14(2)         <---------At4g35610 <---------GLK1(2)    ---------  <---------ANAC58      <---------GLK1(2)     --------------------->WRI1--------->GLK1(2)  <---------ATERF1(1)   catggcttcttcgtctccggagaccagaatcgccgacgaacacctctcccttgagcttaccgttcgcgatctagaatctacggcgttagaaagcgcctcc  2171000  Previous    Next  AGI:  At2g05752.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24517.1) Range:  from: 2169302    to: 2170525    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g05755.1    Description:  integral membrane family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO24054.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 2170880    to: 2173757    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version