Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->ARR14(2)           <------ZmHOX2a(2)                                                              <---------ARR14(2)          <---------ARR11(3)                                  <---------YAB1              --------->GLK1(2)          --------->ARR11(3)                              --------->ARR11(3)             <---------GLK1(2)      ---------->DOF2                                     <---------GLK1(2) --------->ANAC58 ------ALFIN1            <---------AtLEC2           <---------ATHB12        --------->ANAC46 --At4g35610        ------->TEIL     --------->ANAC46--------->YAB1         --------->ANAC58  <------ ->At4g35610--------->YAB1      --------->YAB1    --------->WOX13(1)        --------->ANAC55(2)    --   cacttgaataaagatcataatgtatttgcatcaataaacacaaaacttgtttcaatcaaagattatgcatactacttcacgaaacaatacagaatcggcg  2084500                              <---------YAB1       <---------YAB1                          --------->ARR14(2)    <---------ATHB12                          <---------GLK1(2)    --------->ANAC58                          <---------ARR14(2)  --------->WOX13(1)                        --------->LBD16    --------->ANAC58               <---------AHL20(2) <-----------GT1--------->YAB1                    <------ZmHOX2a(2)               --------->AHL20(2)<---------YAB1--------->ANAC58            --------->GLK1(2)     --------->WOX13(1)<---------ANAC58    --------->ANAC46            --------->YAB1   <---------ATHB12    <---------ANAC46    --------->ANAC58         <---------GLK1(1) ---------------WRI1   <---------ANAC58  <---------DOF5.7(2)        --------->GLK1(1)      --------->AtLEC2 ------->AHL20(2)     <---------LBD16  --------->DOF5.7(2)   --------->ATHB12  <---------TOE2(3)   ataaaatcattcaacatataattttgcggattcttataactgttaacgcaatcaaaattgaaatcgttggaaatcagaatcaaggatcaattcatgcaaa  2084600                           <---------ARR11(3)                           <---------ARR14(2)                  <---------ANAC55(2)                  --------->ANAC58                  --------->ANAC58                  --------->ANAC46  --------->GLK1(2)                                       <------ZmHOX2a(2)                  --------->ANAC55(2)                                                      --------->ARR11(3)                  --------->ANAC55(1)                                                      <---------ARR11(3)   --------->ANAC58        --------->ARR11(3)                      --------->SPL7      ---------->DOF2   --------->ANAC58        --------->ARR14(2)                    --------->TOE1(2) <-------TEIL --------->At4g35610       <---------GLK1(2)              --------->AHL20(2)      --------->CCA1(2)   ctcagaagcaattgaaatagacgtaaccagattttgagaatttttaaacctagtcgctaaaaaaatccctacgatgagagagagatacacaaagatcaac  2084700                --------->AHL20(2)                                              ------>NtERF2            <------MYB46(1)                                                  --------->At4g35610            <------MYB83                                                     <---------At4g35610            ----------->GT1                     <---------ANAC58          <-----------GT1           --------->MYB59                      <---------ANAC58      <---------ARR11(3)           <---------TOE2(3)          <------ZmHOX2a(1)             <---------YAB1      ------>ZmHOX2a(2)       ------->TEIL <-------TEIL<------ZmHOX2a(1)<XXXXXXXXXXXXXXXXXXXXXMIR173 <---------WOX13(1)        <---------MYB52(2) <---------YAB1        --------->ICU4   aagattgatcgattaggtttaaatcgaaaacgaaccaagaggatgttcatgcttgaaggagctaatcgccatgatttttcgctgcgagagagaaacagag  2084800                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                               <-----                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                            ---------->DOF2                          <-------TEIL  --                                   <---------ANAC58                            *TSS  --------->SPL7<-                                   <---------ANAC58                  --------->ICU4<---------SPL7  <-                                   ----------->GT1                   ----------->GT1 --------->ZAT18<     --------->ANAC58             --------->MYB59           <---------AHL20(2)---------->DOF2 -------     --------->ANAC58      ----------------->AGL1        ----------->GT1   <---------------AGL15   --   aagagagaagcaagggtttgtgttcaacgtcgaaattgggtaactccaaagaatggagatagttatttggaatgtttataaaaagggtacgcttggcaac  2084900            --------->AHL20(2)            <---------AHL20(2)           --------->AHL20(2)        <---------AHL20(2)       <---------AHL20(1)       --------->AHL20(1)    --------->AHL20(2)    <-----------TBP  <----------DOF2 ------>ZmHOX2a(2) ---------RVE1(1) --------AGP1 ------->AGP1 ----At4g35610  --------->AHL20(2) ------->ARR14(2) --------ARR14(2) --------ARR11(3)                                                                     <-----------GT1 ------ZmHOX2a(2)                                        <------------CBF         <---------RVE1(1) ---->RAV1(1)   <---------AHL20(2)                 ----------->GT1                <---------CCA1(1) ------->ARR11(3) <---------ANAC55(2)            <------------CBF              ----------->GT1   agatctttatatatttaattacttaaaacttaagagttaagagttaagaagtattgaaatattggatgtattaggcctgaatggatattttcgattcagt  2085000                                             <---------AHL20(2)                                          <---------AHL20(2)                                          --------->AHL20(1)                                          <---------AHL20(1)                                        <---------YAB1                                     <---------YAB1                              <---------GLK1(2)                                                     <                       --------->ARR11(3)--------->YAB1                                           ---                       <---------ARR11(3)--------->AHL20(2)                                     <----         <---------ARR11(3)   --------->ARR11(3)                    <---------AHL20(2)         ------         --------->ARR11(3)   <---------ARR11(3)                    --------->AHL20(2)    --------->AHL20(2)   ttttgagtttagattttagtctatagattttagatttttgttattatatttttgttttaaaaacccctaaaaaattggtttttggtttttgaaaaaataa  2085100      ----------->GT1   <---------WOX13(1) <---------MYB46(3)                                                                <-----------GT1 --------->ATHB12                                                        --------->AHL20(1) ---------YAB1                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ------>TOE2(3)   <---------GLK1(2)                    <---------YAB1    <---------AHL20(2) -----TOE2(3)     <---------ARR11(3)             --------->AHL20(2)      <---------AHL20(1) --->MYB52(1)     --------->ARR11(3)           --------->TOE2(3)         --------->AHL20(2)   cgttgattgagtaaaaactagattttctaaactttagaaaaactaaaaaacttaaatatgaatggaaaactacaataaaatagttttactaaattgtagg  2085200                             <---------AHL20(2)                             --------->AHL20(2)                       ----------->GT1                       <------MYB46(1)                       <------MYB83                     <---------WOX13(1)                   --------->ATHB12                  <---------YAB1                                                <XXXXXXXXXXXXXXXXXXXXMIR782              <---------ARR11(3)                                       <---------ARR11(3)<---------ARR11(3)              --------->ARR11(3)                                       --------->GLK1(2) --------->ARR11(3)   gaaaccaaaattttaaaatcttgattggtattaaaataagtttttaaaaaacaaaaatcaaaaactcttacaaaatctaaaaaacattcaaggtcttagt  2085300                                      --------->ZAT6                        <---------ARR11(3)                                              <---------RVE1(1)                        --------->GLK1(2)                                              --------->ARR11(3)                        --------->ARR11(3)                                             <---------GLK1(2)                       --------->RVE1(1)                                               <---------ARR11(3)                     --------->AHL20(2)        <---------MYB52(1)             <---------AHL20(2)               ----------->GT1      <-----------GT1                          <---------AHL20(2)     -             <---------ANAC46      <-----------GT1       --------->AHL20(2)  --------->AHL20(2)     -   ttttttttttgggttttgtgtaaaaaaatctatctatttaacactctctgttttttgaaaaaaataagtttttaaaagattaatttttagattttttatg  2085400  Previous    Next  AGI:  At2g05630.1    Description:  ATG8D (autophagy gene 8-related); microtubule binding. Identical to Autophagy-related protein 8d precursor (ATG8D) [Arabidopsis Thaliana] (GB:Q9SL04;GB:Q8LBA9); similar to ATG8C (AUTOPHAGY 8C), microtubule binding [Arabidopsis thaliana] (TAIR:AT1G62040.1); similar to unknown [Populus trichocarpa] (GB:ABK94745.1); contains InterPro domain Light chain 3 (LC3) (InterPro:IPR004241) Range:  from: 2082983    to: 2084879    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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