Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------ZAT2                <---------At4g35610                --------->ZAT2                    --------->ALFIN1           ------>ZmHOX2a(1)                    --------->ANAC55(2)           <---------At4g35610                  <---------ANAC46           ----------->RAV1(2)                  <---------ANAC55(1)     <---------DAG2                             <---------ANAC58     <----------DOF2                            <---------ANAC58    <---------ANAC58                <---------ANAC58      --------->MYB46(3)              <---------WOX13(1)    <---------ANAC58    <-----------GT1         <---------ANAC55(2)             <----------DOF2 -----AtSPL3    --------->At4g35610 <---------ANAC58----------->HVH21<-------TEIL       --------->ATHB12   gcaatggcttttcctctgagctgattaaacctcttcttgcctactaggttgcgtgtgacaacaactagaggtgcaaataagcctttgccttcattgacat  2081500                                                             ------->GAMYB                                                         <------NtERF2                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                      <------NtERF2                                                      --------->RAP2.3(1)                                                     ------>NtERF2                                                    --------->ALFIN1                                                    <---------DEAR3(1)                                                   --------->ATERF1(1)                                                 <---------DEAR3(1)                         <----------DOF2         <---------ANAC58                        <---------ANAC58         <---------ANAC58              <---------ZAT14               <-----------RAV1(1) <---------ANAC58              --------->ZAT14               <---------MYB46(3)  <---------ANAC58          <---------ARR14(2) <---------ANAC58    <---------ANAC46          --------->ARR14(2) <---------ANAC58   <---------LBD16 <---------ANAC46            <--------    --------->ATHB12    <---------ANAC58  <---------ANAC46  <------------AtMYB77 <------MYB83 -------    <---------ICU4   <---------WOX13(1)   <---------ANAC58 --------->At4g35610   <------MYB46(1)   <---------YAB1  --------->ATHB12       <---------ANAC58 <---------At4g35610  --------->MYB46(2)   --------->ICU4 <---------YAB1    --------->GLK1(2)<---------ATERF1(1)        --------->MYB59   tcttcatcattggaactgctctgattgctttccttgagactctggcttgttgcggtggcgcaactgtcttggagagcatggtttggtaatcttctccgga  2081600                                                                                           <---------GLK1(2)                                                                                          --------->At4g35610                                                                                     --------->WOX13(1)                                           <---------YAB1                        --------->YAB1                                    --------->YAB1                            --------->YAB1                            <---------HSFC1(2)                             --------->RAP2.6(2)                            --------->HSFB2a(1)                          --------->At4g35610                            --------->HSFC1(2)                           --------->ZAT2 --------->YAB1    <---------HSFB2a(1)     <---------HSFB2a(1)                          <---------At4g35610    --------->HSFB2a(1)    --------->HSFB2a(1)                        --------->At4g35610 <---------At4g35610 -LBD16        ------>ZmHOX2a(1) ------>ZmHOX2a(1)             --------->GLK1(1)--------->ICU4 -->LBD16 <---------ALFIN1 <---------HSFB2a(1)        ------>ZmHOX2a(1)  <---------ZAT2<---------ATHB12   gatggaacttccccatcctccatagaaggaagttcctatcaaagtttgattacatcctattgcagaaatcgaagcagcagccataatcaatcagcttctc  2081700                                                                 <------MYB46(1)                                                                 <------MYB83                                                               <--------P                                                              <-------GAMYB                                                             --------->MYB55(2)                                                             <---------MYB46(3)                                                    <---------ANAC58                       --------->ZAT18                     ==========================HOX2a_HOX2a  <---------AtMYB61             --------->ALFIN1                     ------>ZmHOX2a(2)              <---------ANAC58                    <---------ANAC46                 <---------YAB1                     <---------ANAC46           <---------TOE2(3)             <----------DOF2            <------ZmHOX2a(1) --------->ALFIN1    <-----------GT1      --   cctctctctctcggtctttctgatcgatgttaatggtagagaggaagagaaattgtgtgtgtgtggttggattttgagtttaacattttggtgtggacaa  2081800                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                       <---------DAG2              <---------ANAC55(2)                                                       *TSS                        <---------ANAC55(1)      <-------GAMYB                                    <----------DOF2             <---------ANAC58     --------->ALFIN1                                 <---------ANAC58             <---------ANAC58   <---------ANAC58                                   <---------ANAC58             --------->ANAC55(2)   <---------ANAC58                          <---------YAB1             <---------MYB59          <---   <---------ANAC46    ----------->GT1     --------->YAB1     <---------MYB52(1) <-----------GT1<---- ------->ALFIN1     <---------AtLEC2 ----------->RAV1(1)   ---------->ID1     <---------ICU4<--------   ggtttgggtgttgtttttgtttggatggagaaaccagagccacaaatatgattctggctttttcgtttttttgacttaacttattacgtttctcatgttg  2081900         ------>ZmHOX2a(2)       <---------ARR11(3)       --------->ARR11(3)     <---------YAB1 ------>LBD16                <---------AHL20(2)                                                <----- ------ANAC46              <---------YAB1                                                     <------ ------ANAC58           --------->AHL20(2)              <---------AHL20(2)                    <------ ------ANAC55(1)    <---------ANAC55(2)         <-----------HVH21  ------>ZmHOX2a(1)  <---------AHL20(2) ------ANAC58       --------->ANAC55(2)        --------->DEAR3(1)  <---------CCA1(2) <---------AHL20(2) -----LBD16       <-----------GT1   <---------ICU4     --------->AHL20(2)      <---------AHL20(2) ---RAV1(1)------>ZmHOX2a(1)--------->YAB1  <---------ALFIN1<---------GLK1(2) <---------AHL20(2)   cgggtttatgatcctctgtatcacgttttattatatcaacatttctccaccgtcggattaaatattctcctatctcattttttattttttattttcagtt  2082000                                           <------MYB83                                           ----------->GT1                                         --                                           <------MYB46(1)                                         --                                          --------->MYB59                                         ---     <---------ANAC58                     <---------AtMYB61                                       <--     <---------ANAC46                   <---------MYB52(1)                                        ---     <---------ANAC58                 <------MYB46(1)                                             --- ----MYB52(1)                        --------->MYB59              <----------DOF2             ------- ---At4g35610          <---------LBD16<------MYB83        <-----------GT1             <-----------GT1 -GAMYB         ----------->GT1    <---------MYB52(1) <---------MYB52(1)            --------->AHL20(2)   gtttttggcctgggcattcggtttattcgggtaatcggttcggtttggtttaatcggttttttcggttctttaaaattttgtcaaattaaaccgaataaa  2082100            <------MYB46(1)            <---------MYB46(3)            <---------DEAR3(2)            <------MYB83                                                          <---------MYB59           <---------DEAR3(1)                                                  <-----------GT1  <------MYB46(1)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <------MYB83<---------MYB52(1)                                         --------->MYB52(2) ------->CCA1(2)                                                       <--------P<xxxxxxxxxxxxxxxxxxx ------->ARR14(1)                                                      <---------MYB52(1)           < ------>ARR11(3) <------MYB83                                        <------MYB46(1)            xxxxx -------ARR14(2) <------MYB46(1)                        <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------>ARR11(1)--------->MYB59                      <---------GLK1(2)<-------GAMYB         xxxxxxxxx ------>ARR14(2)<---------AtMYB61         <---------ZAT14            <------MYB83--------->ANAC46xxxx --->DOF2 <--------P     <------ZmHOX2a(1)--------->ZAT14           --------->MYB59 xxxxxxxxxxxxxxxxx   gatttggttcgggtcggtttggttataggattcaaaatcaactctgaactaaaccgattttttttttagttcggttagtttataccgaataagtccaaaa  2082200                                                                                  ----------->GT1                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                     --------->YAB1                                                                     --------->ATHB51                                                                     >>>>>>>>>>AGL20                                                                     >>>>>>>>>>AGL22                                                                     -------->ATHB1               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 <--------ATHB1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     <------------ATHB5        ----------->GT1                                             --------->ICU4<----------ID1        <----------ID1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   --------->ANAC46xxxxxxxxxxxxxxxxxxxxxxx   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               --------->YAB1--------->ATHB12  <---------ARR11(3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)  --------->ARR11(3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   <---------ICU4>>>>>>>>>>AGL24 xxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ---------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxx>smallRNA(le3)                     <---------YAB1<---------ATHB51 xxxxxxx>smallRNA(i)--------->YAB1                 <---------AHL20(2)<---------ICU4<xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                --------->AHL20(2)<---------ATHB12<xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxx>smallRNA(si3) <---------YAB1    --------->CCA1(2) <-----------GT1 <----------ID1     --------   tcaagataatgggtcaaaacaaaaattatagaatgggcgaagataaacaaaattttataattacaaaccaataattgggccaaaacgaaaaacaaactta  2082300                                                                                               <-----                                                                                       xxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                  --------->CCA1(2)                                                                                  <------ZmHOX2a(2)                                                                                 --------->AGP1<xxxxx                                                                                 <-----------ARR10                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                             -------->P          <---------ARR11(3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                        <---------MYB46(3)------>NtERF2          --------->ARR11(3)                                        <---------AtMYB61 --------->At4g35610    <---------AGP1<-----                                       <--------P         <---------At4g35610   <---------CCA1(2)                                      <-------GAMYB     <------NtERF2        <---------At4g35610  ---                                    <---------TOE1(3)   --------->RAP2.3(1)--------->YAB1   ---------                                    <---------TOE2(3)  ------>NtERF2    <---------ICU4 xxxxxxxxxxxxxx                               <---------ICU4      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    ---------                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->YAB1------>ZmHOX2a(2) >smallRNA(le3)             <---------AHL20(2)   xxxxxxxxxxxxxxxx>smallRNA(i)--------->At4g35610  --- ->TOE2(3)                 --------->AHL20(2)  --------->ARR11(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   aacccaaaataactaaaaatccaaacctattaaaaattagggttgatggtatcttggtgccgctaccctcttcataatcagcagatctacgtctgtgacg  2082400  Previous    Next  AGI:  At2g05620.1    Description:  PGR5 (PROTON GRADIENT REGULATION 5). similar to proton gradient regulation 5 [Cucumis melo] (GB:ABY56089.1) Range:  from: 2081006    to: 2081855    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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