Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ZAT2               --------->ZAT18                 --------->ZAT2          <---------AHL20(2)                 --------->At4g35610     --------->AHL20(2)            <---------ANAC58           <----------DOF2            <---------ANAC58           --------->TOE2(3)              ---------->DOF2       <---------AHL20(2)      <---------At5g28300                <----------ID1 <---------ARR11(1)           <-----------GT1 <---------ZAT18  ----------->HVH21 ---------CCA1(2)<---------At4g35610<---------ARR11(1)       <---------ANAC58 ------------>WRI1  ------>NtERF2  <---------MYB52(1)        <---------ANAC58       <---------ANAC46   tcgtatcatttttttcgtaagctgccactatttcaccgtttctttaattgcactatatatgttccttgacgacaaagtaatgtgttttgtgtctaaacaa  1985600                                                         --------->ATHB51                                                         --------->ATHB12                                                        <---------YAB1                                                        <---------AHL20(2)                                    --------->ETT(2)   <---------AHL20(1)                        --------->At5g28300          --------->AHL20(1)                       ----------->GT1              --------->AHL20(2)     ----------->HVH21--------->ANAC58             <---------ATHB12           <----------DOF2     <--    <-----------HVH21 --------->ANAC58             <---------ATHB51      ------>MYB83             --- --------->ZAT2   <-----------HVH21 <---------ETT(2)--------->YAB1       ------>MYB46(1)          ---   acaagctgtgacacatgaagagtcacggtaatatagtgtcgacgttgaaaccaataatattattgcaatctcaccaaatgctttcattcaatctactaag  1985700                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                <---------AHL20(2)          <---------CCA1(2)     --------->AHL20(2)     --------->ANAC46           <---------AHL20(1)     --------->ANAC58       <---------AHL20(2)     --------->ANAC58      <---------AHL20(1)   --------->MYB46(3)      --------->AHL20(1)                                         <---------ZAT6   --------->REM1(1)       <---------ARR11(3)    <---------AHL20(2)             <---------ZAT6 -------ARR14(2)      <<<<<<<<<GATA-1   ------->TEIL                     --------->MYB46(3)   <------ ------>ARR11(3)     <-----------GT1<---------------AtSPL3    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  - ------>ARR14(2)  <---------AHL20(2)--------------->AtSPL8<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<------   tatctacaacccatctctatttttatctatatattttatttgtacctctatttcattccaactcatcgagagacaaccattagagatagtcttatttctt  1985800                                                           --------->MYB46(3)                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                       --------->TGA2(2)                                                      <-----------HVH21                                                      <-----------TGA1                                                     --------->ANAC58                                                     <---------TGA1a                                                     --------->bZIP60(2)                                                     --------->ANAC46                                                     <---------ANAC55(2)                                                     --------->ANAC55(2)                                                     --------->ANAC55(1)                                                     --------->ANAC58                                                     --------->TGA1a           <---------GLK1(1)                         --------->O2           --------->GLK1(1)                         <---------O2           --------->CCA1(2)                        <-----------bZIP911(2)                    -------  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <-----------STF1                          -------  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->MYB52(1)                             --------- ---ANAC58<---------ARR11(3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            <---------ARR11(3) ----->NtERF2                           ----------------------->TaNAC69(2)               ----------->ARR10 ---ANAC58--------->ARR11(3)     --------->YAB1     <-----------bZIP910(1)           ------>NtERF2  -   gaggcctcttaagatatccaactcagcattctcaaaaatactctccctaatggacacgtcatccactagtttctcagaataaaacgatgccaagataagc  1985900                                <---------MYB111(1)                                --------->MYB46(3)                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     <---------YAB1                     --------->ICU4       <-----------GT1 -->ANAC58         --------->YAB1    --------->YAB1 -->ANAC58--------->TOE1(3)    ------>MYB83                                                 <------ZmHOX2a(1) >CCA1(2) --------->TOE2(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                         *TSS -------->YAB1  ----------->GT1------>MYB46(1)          ---------->DOF2        <------------CBF   <--   attaaaaatacaccttaacagttataatggaccaactactaataaaaccccttggcccaaaagaagtatagatcgaagagctattggagagagaggagca  1986000           --------->ARR11(3)           <---------GLK1(2)                                                            -------------      <----------DOF2                  <---------AHL20(2)                           <---------ANAC55(2)    <---------ATHB12               <---------AHL20(2)                               --------->ANAC55(2)   ------>MYB46(1)       ---------->DOF2            --------->YAB1            <---------YAB1   ------>MYB83<---------AtMYB61----------->GT1  <----------DOF2        --------->AHL20(2)    ------- -------WRKY18(1)   <------NtERF2  --------->AHL20(2)  --------->YAB1   <---------AHL20(2)  ------->TEIL   tgaccaatctttagattttggtggccctaaagcatagttaaataatgtgaacttttataaaaacataagcctaaaaaattgtcattacatattgtacctt  1986100                                                                                            ---------                                                                                            <--------                                                                                           <---------CCA1(2)                                                               ------>NtERF2     <---------TGA1a                              ----------->GT1        <---------DAG2              ====================                          --------->ARR11(3)       ------>NtERF2<---------ZAT2   --------->TGA1a                          --------->AHL20(1)    <---------At4g35610              ====================     <---------MYB52(1)   <---------AHL20(1)    --------->At4g35610        <------ZmHOX2a(1)------->TEIL -->AtSPL8          ----------->GT1     <---------TOE2(2)   --------->At4g35610  <---------O2 -->TOE1(3)       ----------->GT1     --------->TOE2(2)     <---------At4g35610  --------->O2   caattcagttttgtttggaagagtgaaaaatattgtaatacctatgttttggctgccttatcagcgggctggagagaggagccacgagtctttgtatctg  1986200                                                          <---------ICU4                                                         <---------ATHB51                                                         --------->ICU4                                                         <---------AHL20(2)                                                   --------->ANAC46                                                   --------->ANAC58                                                   --------->ANAC58                                                   <---------ANAC55(2)                                                   ----------->GT1             <---------GLK1(1)         ---------->DOF2                           --------->ANAC55(1)         --------->CCA1(2)    ------->TEIL                                   --------->ANAC55(2)        <---------ARR14(2) >ARR14(2)      ----------->GT1               <---------GLK1(1)       ---------->DOF2<------ZmHOX2a(1) -ARR14(2)    ---------->DOF2                <---------ARR11(3)    <---------HSFB2a(2)       -------- ===================bZIP_DOF                 --------->ARR11(3)    --------->HSFB2a(2)       -------- ===================bZIP_DOF       --------->CCA1(2)     --------->AHL20(2)   --------->ARR14(2)   <-   taagtgtatgtgaaagaaaagaaaaatgaagttgaagataagaagaagatttcacgtaaataattagttttagaaagttggatatgaggaagtaatctta  1986300                                                                          ----------->GT1                       <---------AHL20(2)                                 <---------YAB1                    --------->AHL20(2)     --------->AHL20(2)          <---------ATHB51                    <---------AHL20(2)     <---------AHL20(2)          <---------ATHB12                   <---------AHL20(2)  --------->AHL20(2)     <----------DOF2      <---------AHL20(2)     <-----------GT1---------->DOF2   <---------DAG2<<<<<<<<<MYB98 ->TOE2(3)         --------->AHL20(2) <---------YAB1         <---------ANAC58                   ----- ->YAB1      <---------TOE2(3)     --------->AHL20(2)        <---------ANAC58                ======== ----------GT1 <------ZmHOX2a(1) <----------DOF2       <------ZmHOX2a(1)--------->YAB1       --------   tttactatttagttttaggaattaatttaagtttccttttattatttaaagagattaggaattgcttttctcaattatgttaaactatgtaatctctcta  1986400                                                                                      <---------ICU4                                                                                      --------->YAB1                                          ----------->HVH21          --------->WOX13(1)                                        <---------ANAC58         ----------->GT1     <---------YAB1          <---------ATHB12          <---------AtMYB61    <---------GLK1(1)         --------->YAB1    --------->MYB52(1)            <----------DOF2        --------->GLK1(1)        <---------------AGL15 --------->At4g35610            <---------HSFC1(2)       --------->CCA1(2)       <-----------------AGL1 ----->DOF2         <---------MYB46(3)  <---------ANAC58<---------ARR11(3)    <----------DOF2 =================================================================================================MADS_MADS ------->AGL15  --------->ALFIN1--------->HSFC1(2)      --------->ARR11(3) <---------ALFIN1   aagagctaacaaatcaatgtggaggttagatcgaagctttggtcgtgacaatgtcgaagatatcagagagtaaatcaacactttctcatcatggtactgc  1986500  Previous    Next  AGI:  At2g05430.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58230.1); similar to MATH domain containing protein [Brassica oleracea] (GB:ABD65138.1); contains domain PTHR10420 (PTHR10420); contains domain PTHR10420:SF29 (PTHR10420:SF29) Range:  from: 1985991    to: 1987263    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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