Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ----------->RAV1(2)              --------->ARR14(2)                      ------>MYB46(1)              ------->TEIL                            -------->P             <---------GLK1(2)             <---------ZAT18             <---------CCA1(2)             --------->ZAT14     <-----------GT1         ----------->RAV1(2)               --------->ZAT18    --------->ARR11(3)         <---------LBD16                   <---------ZAT14    <---------ARR11(3)               ------  --------->ARR11(3)    ---------->DOF2<---------ATHB12 ------->GAMYB                <---------YAB1  <---------ARR11(3)------>ZmHOX2a(1)  <-----------RAV1(1)---------->DOF2          <---------ICU4 >AHL20(2) ------>ZmHOX2a(1)       <---------YAB1     ------>MYB83                --------->ICU4<----   gaaacatcttctcctgaatctcctgcaaaagagatttatcaatggtgcacttagccaacccaaagataccatctactatctcccattatgaagacaattg  1966400                                                                               --------->ANAC55(2)                                                                               <---------ANAC58                                                                               <---------ANAC55(2)                                                                             <-----------GT1                                                                             <---------AHL20(2)                                                                          <---------ICU4     <-------                                                                         <---------YAB1      --------                                                                         <---------AHL20(2) <--------                                                                         --------->AHL20(2) <--------                                                                      --------->AHL20(1)-------------                                              ----------->GT1         <---------ARR11(3)-------------         --------->TOE1(2)             ---------->DOF2         ---------->DOF2 <---------ANAC58     - --->WRKY12       <------ZmHOX2a(1) --------->YAB1            <---------AHL20(2)        <------------ -------GT1   ---------->DOF2      --------->AHL20(2)         --------->AHL20(2)        =============   acctctctaaacctagaaaaggatagactacgtccaaataataaagaagagaaaattactacaattaaagaatatataattacttgatcatccaataata  1966500                   <---------ANAC58                   <---------ANAC58                   <---------bZIP60(2)                   <---------ANAC46                  <-----------------------TaNAC69(2)       --------->ANAC55(2)       <---------ANAC58       <---------ANAC55(1)   <----------DOF2----------->STF1 --------->CCA1(2) -ATHB1<---------ANAC58            <------ZmHOX2a(2) ->YAB1<---------ANAC55(2)    ---------->DOF2               <---------------AGL15                  -- -ATHB51        ----------->TGA1  <---------ARR11(3)        --------------->AGL15                 <-- -ATHB12        ----------->HVH21 <---------AGP1   <---------ANAC46                               --- ---->AGL2    ----------->bZIP910(2)------>ZmHOX2a(2)      <-----------------AGL3                 <-- ---->AGL3    <---------At4g35610 --------->AGP1   <---------ANAC58                             ----- ----->ZmHOX2a(2)<---------TGA2(2)--------->ARR11(3)       <-----------------AGL2              ------ -----AGL3    --------->At4g35610--------->RVE1(1) <---------ANAC58                     --------->At5g28300 ===========================================================================MADS_MADS --------->ZAT6   gatcgctatacgtgtgtgatgacgtagataagaaaagatctaaaacacttgtggggtttgtgctatttatggtgtttcaaacttattcacagtaaatcca  1966600                 --------->ANAC58                 ----------->HVH21                 --------->ANAC46          --------->ANAC55(2)          --------->ANAC46          <---------ANAC55(2)         --------->SPL7    ------>MYB46(1)       <---------ARR14(2)    ------>MYB83 <---------ETT(1)  <---------ALFIN1        --------->ARR14(2)  --------->AtMYB61  ------>NtERF2 --------->MYB46(3) <---------ALFIN1                                                  <---------ANAC58 ----->GAMYB <---------PCF2                              <----------DOF2        <-------TEIL -------MYB52(2) --------->ANAC58                   -------->P            ----------->GT1 ------>MYB46(3)--------->MYB46(3)            <-----------GT1        <---------------AGL15       <--- -------MYB55(2)--------->DEAR3(2)       <---------ANAC55(2)      <-----------GT1     <---------ANAC58 ---->MYB52(1)--------->ARR14(2)         --------->ANAC55(2) ---------->ID1 <---------YAB1      <---- --->TOE1(2)----------->HVH21     <----------DOF2 ------>ZmHOX2a(1)  --------------->AGL15  <--------   acgaccacccatacgggacccgacaccgtatacatactttgatacttatctccttaccactttgtttttttctatattgtgatacattacttccctttta  1966700                                                                                ----------->TBP          <---------YAB1                                                      --------->YAB1       <---------AHL20(2)                                                    <---------YAB1     <----------DOF2                                 <-----------GT1       --------->YAB1      <----- ------TOE2(3)                                   <----------DOF2          <---------YAB1      >>>>>>> -------GT1                                   <-----------GT1       ------>ZmHOX2a(1)         >>>>>>> --DOF2--------->AHL20(2)               <---------AHL20(2)       ---------->ID1 <---------YAB1<<<<<<<   acattttcttttattactaaaattctttcgactgtggattagtttatttgacttttctcattccctcgtcctcattttcattataaatagagagcatgca  1966800                                                               --------------->AGL15       <---------AHL20(2)                                     <---------ANAC58       <---------YAB1                                         <---------ANAC58 ----AtLEC2                                                   <-----------------AGL3 >>>FUS3     *TSS                                         <----------DOF2              <----------DOF2 >>>ABI3    --------->YAB1                      <---------ANAC58             <----------DOF2 <<<FUS3    <---------ICU4                      <---------ANAC58  <----------DOF2<---------AtLEC2   tggggacatattattcatcacaagttttaagcagtatttgtaagaaaatggcttccaagactttgcttcttttgggtctctttgcatttcttttcatcgt  1966900                    --------->ANAC55(2)                    <---------ANAC58                    <---------ANAC58                    <---------ANAC46                    <---------ANAC55(2)                    <---------ANAC55(1)                   <-------TEIL                  <--------P                 <---------MYB52(1)                 <---------ARR14(2)                 --------->ARR14(2)                                              --------->MYB52(1)               --------->LBD16                                                   ------->TEIL              <---------ANAC46                                                 <---------SPL7              <------NtERF2                                                   <---------ANAC58             ------>NtERF2                                                    <---------ANAC58             --------->LBD16                                                 --------------->AtSPL3             <---------LBD16                                                 <---------TOE2(3)            <---------ANAC46                                                --------->MYB52(1)           --------->ATERF1(1)          <---------ZAT18                   <---------MYB52(2) <-------          --------->At4g35610           <---------ZAT14              --------->TOE1(3)       <-------          --------->ATERF1(1)           --------->ZAT14              <---------MYB59        ---------          <---------ATERF1(1)  <---------AHL20(2)                    --------->TOE2(3)      <--------          <---------At4g35610 <---------AHL20(1)                <---------AHL20(2) --------------->AGL15          ------>NtERF2       --------->AHL20(1)                --------->AHL20(2)----------------->AGL3        <---------RAP2.6(2)  <---------AHL20(2)       XXXXXXXXXXXXXXXXXXXXX>MIR402----------------->AGL2   ctcagaaatggctgccgcgggtacgtgttatatatatttcagtctacttcatacatccaaggctaattaaacctaaactaacgtaccgatattagatatt  1967000                              --------->ARR11(3)                              <---------ARR11(3)                              --------->AHL20(1)                              <---------AHL20(1)                              --------->AHL20(2) --RVE1(1)            <-----------GT1                             <---------ARR11(3) --CCA1(1)         --------->MYB111(1)                            --------->ARR11(3) >ARR11(3)      --------->YAB1<---------AHL20(2)          <-------TEIL -ARR11(3)--------->TOE2(3)  --------->AHL20(2)   ----------->GT1<---------CCA1(2)                ---   ttcaaactatttcgtcaatagtagttacaaaatatattcacttatacagaagtggaaatatacatatatatctcaaactaaaacaaatacaaatagaaac  1967100                            <---------ANAC58                            <---------ANAC55(1)                            <---------ANAC58--------->AHL20(2)                            <---------ANAC55(2)                      <---------AHL20(2)                            --------->ANAC55(2)                      <---------ATHB51                          <-----------GT1   <---------AHL20(2)       --------->AHL20(2)                      --------->AHL20(2)    --------->YAB1         --------->YAB1                    ----------->GT1      --------->YAB1 <---------ARR11(3)                  ---------->DOF2 <----------DOF2       <---------AHL20(1)        <---------ANAC55(2) -------->GT1  ----------------------->TaNAC69(2)       --------->ARR11(3)        --------->ANAC55(2)   ttgtatatatgtttagcagtgaaagtaattacgtttctttttctaataatatggatgatatattcccataaataattctcaatctcgtaatcttggtctt  1967200                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                             <------ZmHOX2a(1)                                                                       --------->ATHB51                                                                       <--------HAHB4                                                                       -------->ATHB1                                                                       --------->ATHB12         <---------AHL20(2)                         <------MYB83       --------->YAB1   --------->YAB1 <-------GAMYB                     <------MYB46(1)    <---------ICU4   ------>ZmHOX2a(2)                                <---------MYB46(3)<---------ATHB51  <------ZmHOX2a(2)     ------>ZmHOX2a(2)     ---------->DOF2         <---------ATHB12 --------->ARR11(3)   <---------ARR11(3)   --------->HSFB2a(2)        --------->ICU4              --- <---------ARR11(3)   --------->ARR11(3)   <---------HSFB2a(2)      --------->WOX13(1)            ---   agcgatcttaattcattttcggttgatctctcaacagttttaaatctagaaagttggtttgaaccatggtcaattattaggacttgctaagtcaaaagac  1967300  Previous    Next  AGI:  At2g05380.1    Description:  GRP3S (GLYCINE-RICH PROTEIN 3 SHORT ISOFORM). similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT2G05530.1); similar to glycine-rich protein [Brassica oleracea] (GB:AAL67434.1); contains InterPro domain Glycine rich (InterPro:IPR010800) Range:  from: 1966813    to: 1968034    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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