Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <------MYB83                                                                       <------MYB46(1)                                                                       ----------->GT1                                                                      --------->MYB59                                                                  <---------AHL20(2)                                                                 <---------AHL20(2)                                                              <---------AHL20(2)         <---------TOE2(3)                  --------->AHL20(2)                          --------->AHL20(2)        <-----------GT1    <-----------GT1                                       --------->AHL20(2)         --------->YAB1 ------AHL20(2)   <---------AHL20(2)                      <---------AHL20(2)     --------->AHL20(2) ---->AHL20(2)   --------->AHL20(2)                   --------->AHL20(2)         <---------AHL20(2) ---DOF2    <---------ALFIN1                <----------DOF2--------->AHL20(2)<---------AHL20(2)------   aaattttcacatctacacatttaatttctgaaaattttaaaattctcttttgttaactaaataattttttatttggtatataaaaaattataacgtttta  1869500                                                                                              <------                                                                                            ---------                                                                                            <--------                         <-----------GT1                                            --------->AHL20(1)                     --------->AHL20(1)                                        <---------AHL20(2)                     --------->AHL20(2)                                        --------->AHL20(2)                     <---------AHL20(1)                                    --------->YAB1   <--------                     <---------AHL20(2)                                    --------->AHL20(2)<-------           <---------AHL20(2)                         <-------TEIL        <---------YAB1   --------->YAB1 --->AHL20(2)       --------->YAB1       <-----------GT1                --------->YAB1    <---------YAB1   aataaaactataaatatttgtattatattacattctattctaaatactattctaaatacatgtctatattgctactataatataaatatactattataat  1869600                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      <---------ARR14(2)                        <---------AHL20(1)                                            <---------ARR11(3)                        --------->AHL20(1)          <---------YAB1                    --------->ARR11(3)                  <---------ANAC55(2)         <---------AHL20(2)                      --------->ARR14(2) ---ICU4          --------->ANAC55(2)         --------->AHL20(2)                     <------ZmHOX2a(1) >AHL20(2)       <-------TEIL            <---------AHL20(1)                 <---------LBD16 -AHL20(2)  --------->AHL20(2)           --------->AHL20(1)                --------->ALFIN1 -AHL20(1)  <---------AHL20(2)--------->YAB1<---------AHL20(2)  --------->ZAT6  --------->ARR14(2) --YAB1----------->GT1<---------AHL20(1) <---------ARR11(3)     <-----------GT1 <---------ARR14(2)  -   ttcataaaacagaaataaatacataatatttttcataaaacaatatataaaaatactattgtattttcactaaataagtgcggattaggatctaatatgc  1869700                <----------DOF2               --------->TOE2(3)                                          --------->AHL20(2)             ---------->ID1                                       ----------->GT1             <-----------GT1                                <---------AHL20(1)            <-----------GT1           --------->ARR11(3)    --------->AHL20(2)          <---------ICU4              <---------ARR11(3)    --------->AHL20(1)       ------>MYB46(1)              <---------AHL20(2)      <---------AHL20(2)         ----------->TBP       ------>MYB83                --------->AHL20(2)      --------->AHL20(2)    ----------->GT1     <---------MYB59          <----------DOF2              <---------AHL20(2)  <------------CBF     --------->TOE2(3)        <---------DAG2           --------->AHL20(2) <---------AHL20(2)        < -------->AHL20(2)         <-----------GT1          ----------->GT1      --------->AHL20(2)    ------   aataaaacctaatttttcctttatacgattaactttataaaatctcagtttataagttaaattaaattttgtaaatttaaaaattgtttataaattccta  1869800           --------->AHL20(1)           <---------AHL20(2)           --------->AHL20(2)           <---------AHL20(1)              ----------->GT1                                    -------          --------->AHL20(2)           <---------YAB1   <---------AHL20(2)                    <------ ------------CBF                  ----------->GT1      --------->AHL20(2)                    -------- >ZmHOX2a(1)                  <-----------GT1        --------->TOE2(3)    *TSS               <-------   tgaattgccaaattttattttaaactaaaatttcacatgttaatatagaaaaaaacattaatttttgtatttgttttcatcaaatgcaaatacaagattt  1869900                                                      ----------->GT1                                                 ----------->HVH21          <----------DOF2                       ------>ZmHOX2a(2)                               <----         <---------DAG2                        <---------At4g35610                              -----       <---------ARR11(3)                     <-----------ARR10                           <---------GLK1(2)       --------->ARR11(3)                     --------->ARR14(2)                          <---------ARR14(2) -->GLK1(1)                                   <---------ARR14(2) --------->ANAC58         --------->ARR14(2) ---GLK1(1)          ---------->DOF2      --------->At4g35610    --------->ANAC58       --------->LBD16 ->ARR11(3)        --------->At5g28300    <---------At4g35610--------->YAB1           <---------LBD16 --ARR11(3)   --------->ETT(2)    <------ZmHOX2a(2)  ------>ZmHOX2a(2)               ------>ZmHOX2a(1)   ctccattgagaccttttcgaccgtaaaccgattgcgatcaaattagctgatctgatcggaaaatcacaagaaaaccctagaaaactcctccggattcgaa  1870000                                                                                       --------->CCA1(2)                                                                                      <---------ARR14(2)                                                                   ----------->RAV1(2)--------->ARR14(2)                                                                 <---------GLK1(1)    --------->ARR11(3)                                                           <------NtERF2              <---------ARR11(3)                                                          --------->ANAC58   ----------->HVH21                                                          --------->ANAC58<-----------ARR10                                              <------ZmHOX2a(1) <---------ARR11(3)--------->LBD16                                           <---------HSFB2a(2)--------->ANAC58  <---------LBD16 -----ARR14(2)                             --------->HSFB2a(2)--------->ANAC58<-----------GT1 ---->ARR14(2)   ------->TEIL     <-----------GT1    <---------LBD16     <------ZmHOX2a(1)   ttctcgactcgattcaatgtatcaattgagaaaatttgacttcttcgaggagaaatacggaggcaagatacctgaggatgtaaccggagatatacaatgt  1870100                                                 --------->ZAT2                                                 <---------ZAT2                                                 --------->At4g35610                                                 <---------At4g35610                                              <---------MYB52(1)                            <--------                                           ===================HOX2a_HOX2a                   ---------                                           ------>ZmHOX2a(2)                              --------->ZAT2                                          ====================HOX2a_HOX2a                 --------->At4g35610                     <-----------TGA1     <------ZmHOX2a(2)                               <---------ZAT2                     <-----------HVH21   --------->ARR14(2)         ---------->DOF2       <---------At4g35610                   <-----------STF1      <---------ARR14(2) ------>ZmHOX2a(2)  <---------LBD16               ---------->DOF2     --------->MYB46(3)  ------>ZmHOX2a(1)     <---------ARR14(2)         <---------ANAC58     <----------DOF2<-----------HVH21   <---------ANAC46--------->LBD16         <---------ANAC58<---------At4g35610 <-----------TGA1<---------LBD16 --------->ARR14(2)   tgttccagtggccgtggcaaagtcgtcatcggctctaacgacggatccgtcagcttcctcgatcgcggtgtaaagttcgattccggtttccaagctcact  1870200                                                                                           ----------                                                                                          <-------GAMYB                                                                                     <---------YAB1                 --------->REM1(1)                                             <---------YAB1  ------>ZmHOX2a(1) <---------ALFIN1             --------->YAB1       <---------HSFB2a(2)--------->MYB52(2) -ZAT18  ------>ZmHOX2a(1)             ------>ZmHOX2a(2)              --------->HSFB2a(2)<---------MYB46(3) >ZAT18  =====================================HOX2a_HOX2a  <-----------GT1     <---------TOE2(3) <---   cttcctccgtcctcttccttcaacacctcaaggtatattgatccaatccattcatcaaattttacaattcttctgcaaattgagattgtgtttgttgttt  1870300                                                                                                <----                                                                                              <------                                                                                        <-----------TGA1                                                                                  <----------DOF2 <--                                                                                 --------->HSFC1(2)                                                                <---------------AGL15   <-----------HVH21                                                                <----------DOF2  <---------HSFB2a(1)                                                         <---------MYB52(1)      <---------HSFC1(2)                                                      ---------->ID1             --------->HSFB2a(1) >ID1                       ------>ZmHOX2a(1) <-----------GT1   --------------->AGL15  --------->ANAC46 --------GT1       <-----------GT1     <---------TOE2(3)<-------GAMYB     ---------->DOF2    --------   atcaattcatgctcatcgatttcacaattcctgttgattttgatgtttttacgcttgtcgttgtttctttcaatagcaaaggaactttctcgtcaccgtc  1870400  Previous    Next  AGI:  At2g05170.1    Description:  ATVPS11 (Arabidopsis thaliana vacuolar protein sorting 11); transporter. similar to hypothetical protein OsJ_013975 [Oryza sativa (japonica cultivar-group)] (GB:EAZ30492.1); similar to hypothetical protein OsI_015087 [Oryza sativa (indica cultivar-group)] (GB:EAY93854.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41198.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Vacuolar protein sorting-associated protein 11 (InterPro:IPR016528); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 1869874    to: 1873809    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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