Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------CCA1(2)                                                              <---------MYB52(1)                                                              --------->LBD16                                                             --------->ANAC55(2)                  <---------At4g35610                        <---------ANAC55(2)                  --------->At4g35610                      ------>ZmHOX2a(2)               ---------->DOF2                            <------ZmHOX2a(2)       <---------ARR11(1)             --------->ANAC58                            --------->AGP1           --------->GLK1(2)             --------->ANAC46                            <---------ARR14(2)       --------->ARR14(2)             --------->ANAC58                            --------->ARR14(2)       ------->TEIL   ------>ZmHOX2a(2)                                     --------->ARR11(3)       <---------ARR14(2)  <------ZmHOX2a(2)                                     <---------At4g35610      <---------ARR14(1) --------->ARR11(3)     <---------At4g35610             --------->At4g35610      <---------GLK1(2) --------->ARR14(2)    ------->TEIL                    ----------->ARR10         <---------CCA1(2) <---------ARR11(3)   --------->REM1(1)          --------->MYB46(3)   <---------HSFB2a(2) <---------ARR14(2)  <-------TEIL              --------->MYB52(1)     --------->HSFB2a(2)       -----   tgggatcttgagtccaagaaagctgcatctcatactcttgctcaagactcaacggctcagatcccgtagcttcaagaagagccgaatcttgcatccattg  1703900                             <---------SPL7                           --------------->AtSPL8                           --------------->AtSPL3                           --------->ANAC58                           --------->ANAC58                           --------->ANAC46                          ------->TEIL                     <------------------SPL14                   --------->LBD16                  --------->ANAC46                  --------->ANAC58                  --------->ANAC58                 <---------LBD16                                                 <-----------GT1              ----------------------->TaNAC69(2)                       <------NtERF2    <----------DOF2------>NtERF2      --------->MYB46(3)              ------>NtERF2                 *TSS ---->YAB1<-------TEIL<---------------AtSPL3                        ---------->ID1        <<<<<<<<<TBF1   atggtactttggtacatgttccgccatgtacggtaccaaaaccactctcttcccttccaaactcaccttcgtcgccattcttgtcaccattcttcttctc  1704000                                                                                     <---------AHL20(2)                                                                            <---------O2                                                                            --------->TGA1a--------->ICU4                                                                            =========================                                                <---------ZAT6              --------->O2   <---------YAB1                                           --------->DOF5.7(2)              --------->bZIP60(2)   ---                      --------->YAB1     <---------ANAC46     <------NtERF2 --------->ANAC58<--------                     <---------ATHB12 --------->bZIP60(1) <---------ZAT2    --------->ANAC58<--------HAHB4                 ------------>CBF     --------->O2        --------->At4g35610<-----------TGA1  ------                --------->GLK1(2)     <---------O2<---------MYB52(1)   <-----------GT1   --------->YAB1         --------->ZAT14              <---------bZIP60(1) <---------At4g35610<-----------HVH21 <-----         <---------ZAT14         --------->MYB52(1)       --------->ZAT2    --------->ANAC46--------- ------>ZmHOX2a(1) --------->WOX13(1)<XXXXXXXXXXXXXXXXXXXXMIR4228    <---------AHL20(2) <---------YAB1   ttcctcttctctacagagaatcaatcagaaataagaaacgacgtcgtttactgttatccgagctggcatattttatccacgtcatattttatcataatta  1704100                                 --------->ZAT14                            ------>MYB46(1)                            ------>MYB83                           --------->MYB52(1)                          --------->AtMYB61                          ------->GAMYB                         <---------MYB52(2)                         <---------MYB55(2)                        ------>MYB46(1)                        ------>MYB83                        --------->ANAC58                        --------->ANAC58                        -------->P                      ------->GAMYB<---------ANAC46                      --------->AtMYB61                      <---------MYB111(1)                      --------->MYB46(3)                     <---------MYB55(2)  <---------ARR11(3) --------->MYB46(3)  --------->ARR11(3) <---------MYB52(2) ========bZIP_DOF   --------->ANAC46 ------->DOF2       --------->ANAC58                                   ---------->DOF2 -ICU4              --------->ANAC58 <---------ANAC46               --------->ANAC58        <-------- --->AHL20(2)   --------->ANAC46 <---------ZAT14                    --------->ANAC58      --------->YAB1 ----AHL20(2) <-----------GT1   <-----------RAV1(1)               ---------->DOF2  --------->YAB1 >ATHB51   <---------ICU4--------->MYB46(3)                  --------->At4g35610  <---------ATHB12   aaaagatgtccaaatattacacaaccaaccaactgtgttgtggagagtgtttgagtttcacttagcttcaaagcaaagacttcaatgaaaaatcataata  1704200                <<<<<<<<<ARR1                <<<<<<<<<ARR2               ----------->TBP                <---------ATHB12     --------->ZAT14            ------------>CBF         <---------ZAT14                                               <-           --------->YAB1          --------->ANAC46                                             -----  <----------DOF2--------->YAB1  <-----------GT1                                *TSS   <<<<<<<<<<<<<< -YAB1------------>CBF           --------->ZAT6---------->DOF2           --------->MYB52(1)    <-----   tcaacttttacaatcacaatcatatttcttaagtttcactacacatataaaaagtctcgactctattaacaaaaaaaacagagatgatcaaacaatggcg  1704300                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                 <------NtERF2                                                                              --------->RAP2.3(1)                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                             <---------RAP2.3(1)                                                                             ------>NtERF2                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                         --------->ANAC46    --------                                                                    --------->AtMYB61        <-------                      --------------->AGL15 --------->LBD16        --------->MYB46(3)   <---------HSFC1(2)             <---------ICU4           <---------HSFC1(2)        --------->ZAT14 ------>NtERF2<-------            <---------YAB1      ----------->RAV1(1)   <---------STY1(2)  ----------->HVH21   --------          --------->YAB1    <---------HSFB2a(2)       --------->STY1(2)<---------ALFIN1 --------->HSFC1(2) <---------YAB1       <---------------AGL15 ------>ZmHOX2a(1)   <---------ZAT14--------->DEAR3(1) ---------DOF2    <---------ANAC58    --------->HSFB2a(1)       <---------ZAT18<---------DEAR3(1) ->NtERF2<---------YAB1<<<<<<<<<TBF1  --------->HSFC1(2)  <-----------HVH21--------->RAP2.6(3) <<<LFY  <---------ATHB12   --------->HSFB2a(2)       <---------ZAT2<---------ALFIN1 ---------->DOF2 ----RAP2.6(2)    <---------ANAC58 ---------->DOF2    --------->ZAT2--------->DEAR3(1)--------->DAG2   actttgattctatcattcttgcttcttcttctagcaacaaagcttcctgaatcactagctggtcactgcaccaccacgacggcgacgaaaagcttcgaga  1704400                                                                                                    <                                                                                                    -                                                                                                    <                                                       --------->ANAC58                             <                                                       --------->ANAC46                            <-                                                       --------->ANAC58                           ---  ------->TEIL                   <---------ANAC58   --------->ANAC46                              --- <---------CCA1(2)          --------->WOX13(1)    --------->ANAC58                                --- ->HSFB2a(2)             <-----------HVH21    ------>MYB46(1)                <----------DOF2 <------- --HSFB2a(2)        --------->MYB46(3)        ------>MYB83      <---------ETT(2)          --------->At4g35610 --HSFC1(1)    --------->ANAC46  <---------ANAC58 --------->ANAC46       ---------->ID1   <---------At4g35610 ->HSFC1(1)  ----------->RAV1(1) <---------ANAC46 --------->ANAC58   <----------DOF2 <----------DOF2<   aatgtatctctcttccaacacaacaagcgtcaatcgcgtggacataccatccacacaacgctactctcgacctttgtttctttggaactttcatctcacc  1704500          <---------MYB46(3)                ----------->HVH21          <------MYB83                    --------->At4g35610                                <-------       <-------GAMYB                    <-----------RAV1(2)                                <---------WRKY12       <---------ANAC46                ------>NtERF2                               --------->ARR14(2)      <---------MYB46(3)              --------->DEAR3(1)                       ======================      <------MYB83                    <---------ANAC46                         ------>ZmHOX2a(2)      <---------DEAR3(2)             --------->RAP2.3(1)                       ======================      <------MYB46(1)                <------NtERF2                            =======================     --------->MYB55(2)             <---------ATERF1(1)                       =======================     <---------MYB46(3)             --------->LBD16                           <------ZmHOX2a(2)    --------->ALFIN1                ------>NtERF2                             =======================    <--------P                     --------->ANAC46                          <---------ARR14(2) --------->LBD16                   <---------DEAR3(1)                        --------->ARR14(2) ---------HSFB2a(2)                --------->LBD16                           <---------ARR11(3) -------->HSFB2a(2)               --------->LBD16                            --------->AGP1<---------WRKY38(1) ---------ANAC58              --------->GLK1(1)                       <----------DOF2    <-----------HVH21 ---------ANAC58              <---------GLK1(1)                      <---------DAG2<---------ARR14(2) --------LBD16               <---------ARR14(2)                ---------->CDC5--------->CCA1(2) ------>MYB52(1)             --------->ARR14(2)               =======================HOX2a_HOX2a --->MYB46(1)--------->ALFIN1<---------GLK1(2)                ========================HOX2a_HOX2a --->MYB83<------MYB46(1)  --------->LBD16<---------At4g35610 ------>ZmHOX2a(1)====================== ----GT1<--------P       <---------LBD16<------NtERF2  <---------ANAC58   <---------HSFB2a(2)-------- ---------ANAC46       -------->P <---------LBD16      <---------ANAC58   --------->HSFB2a(2)<-------   ttccgggtgggttggatgggggattaacccggattccccggcgcagatgactggttctcgtgtcctcatcgcctttccagatccgaattctggtcagctc  1704600           <---------ANAC58           <---------ANAC58        ------>ZmHOX2a(1)       <---------ANAC58    ------>ZmHOX2a(1) ------>ZmHOX2a(1) --ZAT2<---------ANAC58                                     <---------ZAT18 =======HOX2a_HOX2a                                         --------->SPL7 ==============HOX2a_HOX2a                                <---------SPL7 ==============HOX2a_HOX2a                 <---------ARR11(3)    ----------->HVH21 ==========HOX2a_HOX2a                     --------->ARR11(3) <------NtERF2 =======HOX2a_HOX2a            --------->ANAC58     <----------DOF2                          <------- ==========HOX2a_HOX2a         --------->ANAC58------>ZmHOX2a(1)<----------DOF2           ------>ZmHOX2a(1) ->At4g35610                --------->WRKY18(1)<---------At4g35610<---------WRKY18(1)  ------>ZmHOX2a(1) --At4g35610            --------->ZAT14---------->DOF2    <-----------HVH21  <---------CCA1(2)   atcctccttccttacgttcttgactcttcagtcaagcttcagaaaggtcctctgctttcccgtccgcttgaccttgtccgtctctcttcctcctctgctt  1704700                                        <---------ANAC58                               <------ZmHOX2a(2)                                        <---------ANAC58                               --------->CCA1(2)                                    <---------ANAC58                                  --------->AGP1                               <-----------RAV1(1)                                    --------->ARR14(2)                           --------->LBD16                                            <---------ARR14(2)                          --------->TOE2(3)                                           --------->ARR11(3)                          --------->ANAC46                                            <---------ARR11(3)                          <---------ANAC55(2)                          --------->HSFB2a(2)     ------         --------->At5g28300<---------MYB52(1)                         =======================HOX2a_HOX2a        <---------MYB46(3)--------->ANAC55(2)                          ------>ZmHOX2a(1)--------->MYB46(3)        ----------->GT1--------->ARR14(2)                              <---------HSFB2a(2)  ---------       --------->ALFIN1<---------ARR14(2) <---------MYB52(1)    <---------At4g35610 ----------->ARR10 --At4g35610      --------->ZAT18   <---------ANAC58        <---------MYB52(1)  --------->YAB1<------   ctctctacggtggtaaaatggccactatccgtaatggtgcttccgttcagatttatgcctctgttaagctctcctcgaacaatactaagatccaccatgt  1704800  Previous    Next  AGI:  At2g04845.1    Description:  GCN5-related N-acetyltransferase (GNAT) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO41210.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 1702218    to: 1704000    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g04850.1    Description:  auxin-responsive protein-related. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G25290.1); similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G25290.2); similar to hypothetical protein OsI_010119 [Oryza sativa (indica cultivar-group)] (GB:EAY88886.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613); contains InterPro domain Uncharacterised conserved protein UCP037471 (InterPro:IPR017214); contains InterPro domain DOMON related (InterPro:IPR005018) Range:  from: 1704280    to: 1705775    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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