Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ----------->GT1    --------->HSFB2a(2)    <---------HSFB2a(2)             --------->MYB46(3)              <---------PCF5    <---------LBD16    ----------->GT1           <---------ICU4     --------->TCP20 -->GLK1(1)         --------->CCA1(2)            --------->YAB1     <---------PCF2                --- ---GLK1(1)        --------->ARR11(1)           <---------ATHB12   ----------->HVH21             <--- ->ARR14(2)        --------->ARR11(3)     --------->At4g35610   --------->TOE1(2)      <----------DOF2 --ARR14(2)        <---------ARR14(2) <-----------HVH21<---------ALFIN1   <----------DOF2        <---   ctatttctcggatggattatagatatggtagaattcaaaccatcagataaatcatcaccactcgaacatgggaccgctatacgagcactctttagttcta  1682600                                       <---------ARR14(2)          --------->AHL20(2)            ----                            --------->TOE1(3)                      <---------AHL20(1)            ----                            <---------MYB59                        <---------AHL20(2)            ----       ----------->GT1      --------->TOE2(3)     <---------MYB52(1)<---------AHL20(2)       -------- ------>YAB1       <----------DOF2     --------->ARR14(2) <---------ANAC58                   -------- ------YAB1       <---------DAG2      <---------GLK1(1)   <---------ANAC46                   -------- ------ATHB12  <-----------GT1        <---------CCA1(2)   <---------ANAC58               --------->YAB1   tcattctatgtgtaaaatcacctttcaaaacctaaactacatatcccactcagttttgtttcttgtcaatttttttttgttttcagataaataataccca  1682700                                       --------->ARR14(2)                                       <---------ARR14(2)                                  ------>NtERF2           ==================================bZIP_DOF                                 <---------PCF2           --------->ANAC55(2)                            <---------ICU4                <---------O2                           <---------ATHB12               <---------TGA1a               --------->AtMYB61 --------->TCP20          --------->TGA1a ----->ANAC58  <---------ALFIN1  <---------PCF5           --------->O2 ----->ANAC58------>NtERF2 --------->ICU4               <---------ALFIN1 ------->GT1<---------ALFIN1--------->ATHB12 --------->DAG2 ->ANAC58   --------->ANAC46--------->YAB1  ========================bZIP_DOF     <----------DOF2 ->ANAC46--------->PCF2<---------MYB52(1)   ---------->DOF2                      <---------DAG2 ->ANAC58--------->ANAC46--------->WOX13(1)------>ZmHOX2a(1)                 <-----------GT1   agtaaaataagaccccaccatctctgttaatcatggggccagttcctaaagcgaagcctcacgtttctatctccactatttccctttttttttgttgaaa  1682800                                                                                     <---------ZAT18                                                                            <-----------------AGL1                                                                           ---------->ID1            --------->AHL20(1)                                             <-----------GT1            <---------ARR11(3)                                             <-----------------AGL1            --------->ARR11(3)                                         <---------AHL20(2)         --------->AHL20(2)   --------->ANAC58                 --------->DAG2   <------------CBF     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                     ---------->DOF2------------>CBF  <-----    ----------------->AGL3    --------->ANAC58         --------->AHL20(2) <-----------GT1      <-----   cttagaaccaaaaatatatccatgacaaactcaagcactactacgactagataacaaataaacaaaaaggaatttttttcccaattggccacttgcactt  1682900              <---------ICU4             --------->AHL20(2)             ----------->TBP         ------------>CBF        --------->ANAC46        --------->ANAC58        --------->ANAC58                          *TSS      <-----------GT1    --------->ANAC46      ------>ZmHOX2a(1) ----DAG2--------->MYB46(3) <-----------GT1 ------>ZmHOX2a(1)                    --------->AtMYB61 -----DOF2   <---------ATHB12       <----------DOF2                          --------->MYB46(3)   tttagttttcacccaataaatacctctaagtaacctctctttcttcctcctcaaaaaaaaaactcatttgctctctccaaacaccaaaacccaaaataag  1683000                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                       --------->SPL7                                                                                      ------>NtERF2                                                                                      <------NtERF2                                                                                     <---------SPL7                                                                                    <---------ANAC46                                                                                    <---------RAP2.6(2)                                                                                   <------NtERF2                                                                                   --------->ATERF1(1)                                                                                  <---------ATERF1(1)                                                                                 --------->ALFIN1                                                                                 <---------DEAR3(1)                                                                            <---------LBD16                                                                            <------NtERF2                                                                            --------->LBD16                                                                     ---------->DOF2<---------ANAC58                                                            <---------ARR14(3)  --------->ATERF1(1)                                                            --------->ARR14(3)  <---------ABI4(1)                                                            --------->GLK1(2)<---------ANAC46                                        --------->YAB1      --------->ARR14(2) --------->ALFIN1------                             <---------ARR11(3)      --------->TOE2(3)    <---------LBD16 ---------->DOF2                    <---------GLK1(2)<---------------AGL15  <---------ARR11(3)<---------MYB46(3)            --------->ZAT6   --------->ARR11(3)      --------->TOE1(3)--------->DAG2<---------ANAC58 ---------->DOF2---------->DOF2      --------------->AGL15  --------->ARR11(3)--------->MYB55(2) <---   tttcaaaggagaaaacactaaagatgctcaagatgttgtctatattaagaagaaaccttcaaaatcttcgaaaaagcccgcgggtggcggacgaaagcgc  1683100                                     --------->MYB52(1)                         --------->bZIP60(1)                        ----------->HVH21                                       <---------bZIP60(1)                        <------ZmHOX2a(2)                            <---------At4g35610                        ==================HOX2a_HOX2a                --------->LBD16             <-------GAMYB <---------O2                          <---------ARR14(2)         ------------>AtMYB77       --------->ARR14(2)         <---------HSFC1(2)         ------->GAMYB --------->ARR11(3)                <---------ICU4       <---------ICU4        --------->MYB46(3)<---------LBD16      <---------At5g28300  --------->ANAC46           ------ <---------ANAC58      <---------ARR11(3)     --------->MYB52(1) --------->ARR14(2)       <---------- <---------ANAC58     <---------GLK1(1)      ----------->HVH21 --------->HSFC1(2)    --------->ICU4 --->ZAT18   --------->At5g28300    <---------ARR14(2)   --------->YAB1       --------->YAB1   <----- ----GAMYB  <---------MYB46(3)     <------ZmHOX2a(1)    --------->ICU4       <------ZmHOX2a(2) <-----   gttgccttcaacgacggttaatggagatcacgggggaggaaacgggagtaacggtggaataatgaagtttccgctatcgatcatgtcatgtttttcggtt  1683200                               <---------LBD16                               <---------ANAC46                               --------->ETT(1)                              <------NtERF2                             <-----------HVH21                            --------->ALFIN1                          <---------ANAC58                         <---------MYB46(3)                                                 ---------                        --------->ALFIN1                       ------->GAMYB                ---------                      <-----------RAV1(1)          <---------LBD16                         <-------TEIL                      <---------ANAC46             <---------HSFB2a(2)                    --------->CCA1(2)                    <---------ANAC46          --------->HSFB2a(1)                         --------->ARR14(1)               <---------At4g35610            <---------HSFB2a(1)                        --------->ARR11(1)       <---------At4g35610<---------ANAC58    <---------HSFC1(2)                         --------->ARR14(2)    <<<<<<<<<AtCCA1 <---------ANAC58     <---------TOE2(3)    --------->MYB46(3)       ----------->ARR10    <<<<<<<<<AtLHY  <---------ANAC58     <---------HSFB2a(2)<-----------GT1        <---------ANAC58 --->ARR14(2)  --------->At4g35610       <---------YAB1 <---------MYB46(3)         <---------ANAC58 -GT1  <---------ZAT2 --------->ALFIN1--------->ICU4   <---------TOE1(2)        <---------bZIP60(1) ----ARR14(2)=====================RAV --------->GLK1(2)<---------TOE2(2)        --------->bZIP60(1) ----TCP20   <-----------RAV1(2) <------NtERF2--------->HSFC1(2)         <---------ANAC46<---------ARR14(2)   ccacgagttagcagggcagatggtgtgtgggtgtcgggagattatggaagggtctcggaggttaaccatctcatggtttgtgatggcatgagatacgctc  1683300              --------->ARR11(3)             <---------CCA1(2)         <---------AHL20(2)                                       <---------ANAC46          ---------         --------->AHL20(2)                                       <---------ANAC58         --------->ARR11(3)  <---------TOE2(3)                                               ----------->GT1<----------DOF2 >ANAC58 --------->YAB1                                           <---------ANAC58         <---------ARR11(3) >ANAC58--------->ICU4                              <----------DOF2            <---------ZAT18    ---   tcttaatgtaattatatatctagctcgacttaatttagctagtagtacatatttcttttgtgttgatggcgtttatattagggcatttagtgagatatac  1683400                                                                                                <----                                               --------->TOE2(3)   <---------DAG2              ------                                             --------->ARR11(3)    <----------DOF2           <-------                                             <---------ARR11(3) <-----------GT1              --------       <-----------GT1                       <-----------ARR10 <---------AHL20(2)      <----------DOF2   <----------DOF2      <---------ANAC46    <---------CCA1(2)  <-----------GT1         <---------DAG2 >CCA1(2)          <---------AtLEC2 ---------->DOF2        --------->ICU4         --------->At4g35610 ------->DOF2<----------DOF2      <---------YAB1        <------ZmHOX2a(1)         <---------At4g35610   aaaagcttttcacttcttttttcatggtttgtgtttattaaagaacatatcttagctaggaatatttaactttttctcttactcatctgctttttgatct  1683500  Previous    Next  AGI:  At2g04795.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G35732.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24128.1) Range:  from: 1682950    to: 1683472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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