Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->ICU4                                                                                      <---------YAB1                                                                                      <xxxxxxxxxxxxxx                                                                                    <--------HAHB4                                                                                    <---------ICU4                                                               --------->ANAC58     --------->YAB1                                                               --------->ANAC58    --------->ICU4                                                               --------->ANAC46    <---------YAB1                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         <---------ARR14(2)                               <---------ATHB12         <---------ATHB12         --------->ARR14(2)                             --------->WOX13(1)     --------->LBD16       --------->LBD16                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------     <---------LBD16                 <---------ICU4  <-----------HVH21        --------->TOE2(3)    ------>MYB46(1)               <-----------GT1 ------>ZmHOX2a(1)           --------->ANAC46    ------>MYB83                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------ANAC55(2)  ------->GAMYB                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->MYB46(3)         <-------TEIL     <----------DOF2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ----------GT1         --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)--------->ANAC55(2) ------ARR11(3)     --------->ANAC55(2)   <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   ataaccatccggattcaaactcacataatatacgtttaaccattacactttcctctgtcaatcactcgaaactatctcatccgtaatcatttttaaccga  1676300                                                                                                    -                                                  --------->AHL20(2)                                -                                                  <---------AHL20(2)                         <-------                                                  --------->AHL20(1)                        <-------GAMYB                  <---------ANAC58          ------->GAMYB                                 <---------ANAC46                  <---------ANAC58          --------->YAB1                         --------->bZIP60(1)            --------->ARR11(3)              --------->TOE2(3)                      <---------bZIP60(1)        ---------->DOF2                    --------->MYB46(3)    <-----------RAV1(1) ----------->HVH21 xxxxxxxxxsmallRNA(s2)                   --------->WOX13(1) <----------DOF2        xxxxxxxxxxxxxxxxxx --GT1<---------ATHB12        <---------AHL20(2) --------->AHL20(2)    xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   tatatcaaatcaaagaaattgcctactaacattttttttttgtcaaccaaaattaattagagcttaaatgttgtttacatatatgatgtgatgcggttag  1676400                                                         ---------->DOF2                                           --------->HSFB2a(2)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                              <---------TOE2(3)        --------->ARR11(3)                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                             <-----------GT1      --------->AHL20(2)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------ANAC46   <-----------GT1<---------HSFB2a(2)         <---------ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    ----------->GT1       <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 --------->GLK1(2)   ------->TEIL      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----------->GT1  --------->ARR14(2) -------->ANAC58    <-----------GT1  --------->ZAT6 <---------TOE2(3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -------->ANAC58  <---------AHL20(2)--------->ZAT18---------->DOF2          <---------ARR14(2)     <- --MYB52(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------AHL20(2)  ----------->HVH21      -------- xxxxx>smallRNA(si3)--------->MYB52(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----------ARR10<-------   acacgaatttttcgtgctaaattatcggttttaacatttgcactacgagaaattaaagataaagaaaaacttgtgacaaatctgcctagtaacatttaaa  1676500                                  <---------ZAT18                               <---------ANAC46                            <---------AHL20(2)                           --------->AHL20(2)                        ------>MYB83                      ------->GAMYB                    --------->ANAC58                                 --------->ATHB12                    --------->ANAC58                     <---------AHL20(2)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->AHL20(1)         <---------YAB1 ------>MYB46(1)                  <---------AHL20(1)  >>>>>>>>>>>>>>>>>LFY<---------MYB59                    --------->AHL20(2)                        <- ------->TEIL      ------->GAMYB  --------->ZAT18       --------->AHL20(2)                        <-- ------TEIL       --------->MYB46(3)                    <---------AHL20(2)                        --- ->AHL20(2)       <---------MYB111(2)               --------->AHL20(2)   --------->YAB1        ------ --AHL20(2)       <---------MYB55(2)           ----------->GT1  ---------->DOF2             ------->TEIL   atgcatccattgtgattacaacaaccaaattttatgtggacttgtagattagaaaaaaataaatttgaaagtcattgaaaattgttgaaaaatgtattta  1676600                                                                  <---------WOX13(1)                                                                 <------------CBF                                                                --------->ATHB12                                                                <--------ATHB1                                                                -------->HAHB4               -------->HAHB4                                   <---------ICU4               <---------ICU4                                  --------->ICU4              --------->ICU4                                   <---------ATHB12            --------->YAB1                                     <---------YAB1   <---------AHL20(2)                            <---------AHL20(2)   --------->AHL20(2)     <---------AHL20(2)     --------->AHL20(2)                                 < --------AHL20(2)         --------->AHL20(2)  --------->YAB1--------->AHL20(2)                 ------ -------AHL20(2)       --------->YAB1---------->DOF2   ------------>CBF---------->DOF2        <------ ------>AHL20(2)    ----------->RAV1(1)  --------->AHL20(2) <---------AHL20(2)              --------- --->YAB1  --------->AHL20(2) --------->YAB1--------->AHL20(2)<---------TOE2(3)         <---------ALFIN1   taaatttaaacaaataataatgcaacaataaatgataaacaaagaaaataataaaacaacaattaatgattgagaaagacactaaaacccccactaatca  1676700                                                  --------->ANAC58                                                  --------->ANAC58                                        ----------->GT1                                            -- -------TEIL                           *TSS     ---------->DOF2   --------->AHL20(2)        --------- --->YAB1                              <---------YAB1  --------->ICU4            --------->YAB1    -- ---ATHB12     <----------ID1          <---------TOE1(3)  --------->ICU4        <---------YAB1     -- >YAB1     ---------->DOF2             <---------TOE2(3)--------->YAB1      <---------GLK1(2)     ---   tatacatataggtaaaagaaacaaaatcaagaagagtgtttatggttaaacaaagcaaaaatgatcaaataaaaacaagattatgatgttgttgttgtaa  1676800                                      ------>NtERF2                                      --------->LBD16                                     --------->RAP2.3(2)                                     --------->ANAC58                                     --------->RAP2.6(2)                                     --------->ANAC58                                    --------->RAP2.3(1)                                    <------NtERF2                                  <---------DEAR3(1)                                  --------->ALFIN1                                 --------->ATERF1(1)                                <---------DEAR4(2)                               <---------DEAR3(1)                             --------->MYB52(1)                    --------->LBD16                            ----------->HVH21                    --------->ANAC46                         ----------->RAV1(1)                   --------->ANAC46                        --------->DEAR3(1)                     <---------ALFIN1          --------->O2  --------->AtMYB61 --------->MYB46(3)   --------->REM1(1)          --------->ANAC58 --------->MYB46(3)                 -------->P ------->ANAC58         <---------ALFIN1----------->RAV1(1)   ------>MYB46(1)          <---------ALFIN1 -->GT1   --------->ANAC58 <---------MYB55(2)                 ------>MYB83            ------->GAMYB ------->ANAC58        --------->MYB46(3) --------->REM1(1) --------->AtMYB61        <---------ALFIN1 ------->ANAC46     --------->ZAT18<---------ATERF1(1)   <---------ALFIN1   <-------TEIL ------>RAP2.6(3)   <---------ZAT18------>NtERF2      --------->MYB46(3)   <-----------GT1      <----   aacggcatagtcaagtcacaagcgcaccaccagacggtgccgcaacaacaacaacaacaacacctacaccgcataagttacattacaacacaccctgtct  1676900                         <---------ARR11(3)                         --------->ARR11(3)                    --------->YAB1                 --------->YAB1       <-----------GT1                                         =======                <---------AHL20(2)<---------AHL20(2)                                          -------               --------->AHL20(2) --------->AHL20(2)          <---------At4g35610         ---------->DOF2       <----------DOF2 <---------AHL20(2)                  ------>ZmHOX2a(1)          <----------ID1 ------DOF2 <----------DOF2     <----------DOF2         ------>ZmHOX2a(1)         ---------->DOF2   ttaaaaactctttcctttttaataataaatctttctttaaataccatctctcttcttcctcctctgcttctcttcatcttctaagaaagaaacaaagaaa  1677000                                       <---------DAG2                                     --------->At4g35610                           --------->At4g35610                           <---------At4g35610                       <----------CDC5 <----------DOF2                       ===================MYC_MYB               --------->ATHB12      <---------At4g35610               --------->ATHB51    <---------WRKY12              <---------MYB52(1)--------->TGA1a              <---------YAB1    ==================bZIP_DOF              --------->ICU4  <-----------RAV1(2)                            <---------TOE2(3)            --------------->AGL15<-----------HVH21                           <---------------AtSPL8           <---------YAB1  --------->ZAT2                                <---------DAG2 =========================================bZIP_DOF   <---------ALFIN1    <----------DOF2     <------- --->DOF2<-----------GT1   <---------ZAT2  <-----------GT1   ------>ZmHOX2a(1)              <--------   gacttcacattttaccattatttgctctgagctcaggtcagcttttctctcttcccctctctcctctctcttctactttatggtacagttgaattaacaa  1677100                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                          <---------AGP1                                <----------DOF2                           --------->AGP1                          --------->ARR11(3)                              --------->ARR14(2)                          --------->ARR14(2)                              <---------ARR11(3)                          ------->TEIL                                    --------->ARR11(3)                          <---------ARR14(2)                              <---------ARR14(2)        <                         <---------CCA1(2)---------->ID1                  <-----------ARR10    <----- --TOE2(3)            ------->TEIL  --------->ZAT6                       <---------CCA1(2)     <----- ---GT1          --------------------->WRI1                           ------>ZmHOX2a(2)        <-----   tgccattgaactactacttccatgaatgtatcttctttacacttgttgtcttaagtttctatttttgtctgatccagatctagtttcttctcttgtgtct  1677200  Previous    Next  AGI:  At2g04780.1    Description:  FLA7. Identical to Fasciclin-like arabinogalactan protein 7 precursor (FLA7) [Arabidopsis Thaliana] (GB:Q9SJ81;GB:Q8LG01); similar to FLA12 (fasciclin-like arabinogalactan-protein 12) [Arabidopsis thaliana] (TAIR:AT5G60490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23991.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73020.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 1676739    to: 1678452    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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