Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ARR14(2)                                    --------->ARR14(2)             ----------->HVH21      <---------GLK1(2)                    <---------ANAC58           <---------ANAC55(2)  <---------HSFB2a(2)                      <---------ANAC58           --------->ANAC55(2)  --------->HSFB2a(2)                 <---------ANAC58          <------  <---------YAB1                <---------LBD16                     <---------ANAC58         <------- -----------GT1             <----------DOF2               --------->HSFB2a(1)                <------- ------->AHL20(2)        ------->TEIL <-------TEIL        <---------HSFB2a(1)         ---------->DOF2   aataactattgatatgtgacacatatgaagctttctcggattcgtttatcgagtgatggaacgttgtagtacttgtcttgagaaacgatgaagcgccttt  1662300                                                                      --------->ARR14(2)    <---------LBD16                                                   ------>MYB46(1)   <---------LBD16                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   ------>ZmHOX2a(1)                             --------->ANAC46    --------->WOX13(1)            -- ------>ZmHOX2a(2)   ---------->DOF2    <xxxxxxxxxxxxxxxxsmallRNA(le3)------>MYB83               <--- ----DOF2    <---------ZAT18          --------->YAB1      --------->ANAC46                      <---- ---DOF2   <---------ZAT18           <---------ATHB12   <-----------GT1      <---------ICU4     ----- --DAG2    --------->ZAT18     --------->YAB1  <---------DOF5.7(2)  --------->AtMYB61     <---------YAB1   tgatcctcgggattgcacacttaaaaaggcctatcacaaatcatatagtaaacgcagtttacgacatggaccaatccacttattgccaatttgttataga  1662400             <---------LBD16                    --------->ATHB12    <------------MYB.PH3(2)                   <---------ZAT18 ------->TOE2(3)                          ---------->CDC5 ---ZmHOX2a(2)                           ------>ZmHOX2a(1) -----ARR11(3)                          --------->TOE2(3) ---->ARR11(3) --------->LBD16          --------->TOE1(3)                         ------>ZmHOX2a(2)   tcattaacaaactcacccggagaaaggtttcgaattcaacttccttagcgcgattgggataagactcatccaatatagttttgatctcattttcatcaaa  1662500                                                                                                  ---                                                                                                  ---                                                                                             <-------                                                                                             --------                                                              --------->ARR14(2)             --------                                                              <---------ARR14(2)            ---------                                                           <---------MYB59             --------->ANAC46                                                       ----------->HVH21               --------->ANAC58                                                  ----------->HVH21                    --------->ANAC58                                   --------->At5g28300 --------->ANAC58             --------->TOE1(2)                   <----------DOF2<---------MYB46(3)   --------->ANAC58             --------->TOE2(2)      --------->AHL20(2) <<<<<<<<<<<<<<<<<LFY <---------At5g28300         <---------------------WRI1   cttgccattgaaatatttcaactttgcaaacactggtggtaaatgtttcacagtgacacgaccgaatcgagtttttgtcgaataaaactacgaaaaaagt  1662600                                                                                     <---------ANAC58      <---------ARR11(3)                                                             <---------ANAC58      --------->ARR11(3)                                                       <---------ALFIN1  ---------->DOF2                                                         <---------ARR14(2) ------>ANAC58                                                            --------->ARR14(2) ------>ANAC58                        <---------ARR11(3)               <---------ANAC58 --------AtSPL8                    <---------TOE2(3)                   <---------ANAC55(2) ->DAG2                           <-----------GT1                      --------->ANAC55(2) ------->AtSPL8         <---------ZAT14            ----------->HVH21   <---------ANAC58         <---- ->DOF2<------ZmHOX2a(2)---------->DOF2    ---------->DOF2            --------->ZAT18<---------ANAC46   acccaaaagatcaatttgttgaatactaaagtgatataacgatattaaagagactgaccttggatttaagagtgcgtaactccacttgtgtgaattggct  1662700                                                                                                 <---                             --------->ANAC46                                                   <----                             --------->ANAC58                                              <---------                             --------->ANAC58               <---------ANAC58            ------>ZmHOX2a(2)                            ------>MYB83                    <---------ANAC58            =============                            ------>MYB46(1)               <---------YAB1              --------->ARR11(3)                          --------->AtMYB61            --------->ICU4             ---------->DOF2----                   --------->ANAC58                    <---------YAB1--------->ARR11(3)==============          <------ZmHOX2a(2)--------->MYB52(1)        --------->YAB1  <---------ARR14(2)<------ZmHOX2a(2) ------DOF2        --------->ANAC58                 <---------YAB1  <---------CCA1(2) <---------ARR11(3)   ttgtagccatggatcagagacaagaacaccaacgtaactagacatctcttgaatatgatgattcttgctcaaatcttgtttagagaaagatcgcttaatt  1662800                                          --------->ARR11(3)                                    <------NtERF2                        --------->AHL20(2)<---------ARR11(3)               <---------AHL20(2) ------AHL20(2)   ----------->GT1 <---------ANAC46                   <----------DOF2 -----AHL20(2)   <---------WOX13(1)--------->LBD16            <---------AHL20(2) -DOF2   ------>ZmHOX2a(1)        <---------ANAC58           <---------YAB1--------->AHL20(2) ===============HOX2a_HOX2a       <---------ANAC58          <---------AHL20(2) ----->AHL20(2) <------------CBF  --------->ALFIN1--------->ATHB12<-----------GT1  <---------MYB46(3) ===============HOX2a_HOX2a      <---------LBD16 <---------YAB1   <---------AHL20(2)      -----------   tatatttcttcctacttagattgaaataaaacagaggcgggagagatgtttttgattagtatttttattttctttatttaaatgtttgttctctgacatt  1662900                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                       --------->ATHB12                                                                                      <---------ATHB12                                                                                      --------->ICU4                                                                          >>>>>>>>>RAP2.2     -------                                           --------->HSFB2a(2)          <---------ARR11(3)    -------                                           <---------HSFB2a(2)          --------->ARR11(3)   <-------                                        <---------YAB1                 --------->CCA1(1)  --------->AHL20(2)                                       <-----------TBP                 --------->RVE1(1)  <---------AHL20(2)                                     <---------------AGL15       ----------->GT1      <---------YAB1                <-----------GT1      <----------DOF2           <------------CBF      <---------TOE2(3)      --------->YAB1           --------->LBD16                 >>>>>>>>>ARR2       <---------AHL20(2)   --------->YAB1             --------->HSFB2a(2)        --------->HSFB2a(2)      --------->AHL20(2) <---------TOE2(3) --------->TOE2(3) --------------->AGL15     >>>>>>>>>ARR1   --------->AHL20(2)   < >HVH21   ----------->GT1     <---------HSFB2a(2)        <---------HSFB2a(2)   <---------AHL20(2) <--   tttaagaataataggttattacattagtgattccagaggctttttatagaagattatttctgtaagattgtaaatatctaaatatttaatgatttattat  1663000           --------->MYB52(1) ----AHL20(1) --->AHL20(1)                                --------->YAB1 ----AHL20(2)                            --------->AHL20(2) -->YAB1  <---------AHL20(2)          --------->ARR11(3) -->AHL20(2)                    <---------TOE2(3) --YAB1   <---------ATHB51    <---------AHL20(2)--------->ARR11(3)                   <----------DOF2 ---------AHL20(2)       ------------>CBF<---------AHL20(2)     ---------->DOF2--------->YAB1<------- -------AHL20(2) <---------CCA1(1)    <---------ARR11(3)       <---------AHL20(2)   <---------DAG2 <-   atttttatctaaataatggatatttctatcaatttatgtagattttattagaacttgacaaatattaaaagtgattttcaatagtaccttttgttatgtt  1663100                                                                        ------->TEIL                                                                       <-----------GT1                                                                   -------->HAHB4                                                                   --------->YAB1                                                                   <---------ICU4       --------->MYB46(3)                                                                  --------->ICU4       --------->ANAC46                                               <---------ANAC58   <---------ATHB51     --------->ANAC58            <---------ICU4                     <---------ANAC46 <---------ICU4         ------>MYB83      --------->TOE2(3)                   <---------GLK1(2)   <---------MYB59          ------>MYB46(1)  <----------DOF2              <---------ICU4  <---------ANAC58------>ZmHOX2a(1)       --------->ANAC58 --YAB1------>ZmHOX2a(1)     ----------->RAV1(1)      <-----------GT1<---------YAB1  --------->AtMYB61 ----------GT1  <---------At5g28300  ----------->RAV1(1)     <-----------------AGL1 --------->MYB46(3)   ttttctttcctcaaaaattacagcaaaaatccaacattgccacagaattgcgtttgatacccttcctaattatgaacccttcttaaaccacccaaaaact  1663200  Previous    Next  AGI:  At2g04750.1    Description:  fimbrin-like protein, putative. similar to FIM2 (FIMBRIN-LIKE PROTEIN 2), actin binding [Arabidopsis thaliana] (TAIR:AT5G35700.1); similar to ATFIM1 (Arabidopsis thaliana fimbrin 1), actin binding [Arabidopsis thaliana] (TAIR:AT4G26700.2); similar to ATFIM1 (Arabidopsis thaliana fimbrin 1), actin binding [Arabidopsis thaliana] (TAIR:AT4G26700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38871.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61366.1); contains InterPro domain Calponin-like actin-binding (InterPro:IPR001715); contains InterPro doma Range:  from: 1659759    to: 1662745    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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