Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                               ------                                                                            ---------->DOF2    ------                  ----------->GT1                           ----------->HVH21          <---------ZAT14      <---------ARR14(2)                                  --------->ANAC55(2)          --------->REM1(2)      --------->ARR14(2)                                  <---------ANAC55(2)          --------->ZAT14      <---------GLK1(2)  <-----------ARR10         --------->ANAC58        --------->AtMYB61   ------ ---HVH21         --------->YAB1     --------->ZAT6--------->ANAC58    <----------ID1 --------->ALFIN1   tcccatcagatttgtttctatggtgactatctcaccataacacttgtaagagcaaacaatacttgacgctaagacgaccaaagtagcagtgtagaataag  1651400                                                                <-----------GT1                                                            <---------DAG2      <----------DOF2                                       <----------DOF2 -------->ANAC58                                <---------DEAR3(2) -------->ANAC58                               <---------DEAR3(1) --->ANAC46                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --->ANAC58  -------->P          <---------ATHB12          <---------DAG2                 <---------YAB1 --->ANAC58 <-----------GT1    --------->WOX13(1)     --------->ARR14(2)               --------->ALFIN1   ccaagaaactttactaacctctctacttccctccaatcacttgtagtaggcggtccaatccccttttctccatcgactacctccaagaagtggtcattgt  1651500                                                                         <---------GLK1(1)                                            <---------ANAC58             --------->GLK1(1)                                            <---------ANAC58       <------MYB83                                           --------->ATHB12        <------MYB46(1)                                  --------->TOE1(3)               --------->MYB111(1)                      <-----------HVH21   <---------YAB1          --------->MYB46(2)             --------->RAP2.6(2)  --------->TOE2(3)               --------->MYB111(2)          ------           <---------At4g35610  ------>NtERF2<---------WOX13(1)  <--------P                 ---------   acaacttgtcttcagcctccatcttgtcaaatgccaccttaaacttgattgctcttgttaacatcaagtaggtggaattccaccttgttttgacatccaa  1651600                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)                                                                    --------->ARR14(2)                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)                                                                    <---------ARR14(3)                                                                    <---------ARR14(2)                         <-----------HVH21              <---------HSFB2a(2)                      <---------ANAC58                  --------->HSFB2a(2)                      <---------ANAC58                  --------->HSFC1(1)         --------->ANAC58                      ----------->RAV1(2)               <---------HSFC1(1)   ---------->DOF2      <--                     -------->P  <----------DOF2<-----------HVH21   <---------AGP1 --------->ANAC58 ---->DOF2          <-----------GT1   --------->At4g35610           <-----------ARR10             <-- >AtLEC2  --------------------->WRI1  <---------At4g35610           --------->ARR14(3)       <-------   aggcaaactctcccttgtaatcttacctgtcacaactttctgctcaaatgagtcacatctagaagtagaagatctcacatatagcactcaattgtggatg  1651700                                                                                                   <-                                                                                                   <-                                                                                      <---------ETT(1)                                                                                      ----------->HVH21                                                                                     ------>ZmHOX2a(2)                                                                                    --------->CCA1(2)                                                         --------->ANAC58           <------ZmHOX2a(2)                                                     <---------ALFIN1               --------->ARR14(1)                                                     *TSS--------->ANAC58          --------->ARR14(2)                          --------->ARR11(3)     --------->ANAC58                  <---------ARR11(3)                          <---------ARR11(3)    ------->TEIL                       --------->ARR11(3)             <---------MYB59                   ------>MYB83                        --------->ARR11(1)            ----------------->AGL1 --------->YAB1--------->ANAC58                  <---------ARR14(2)       --------->ATHB12   <---------ARR14(2) <---------MYB59--------->ARR14(2)    <---------HSFC1(2)       <---------ICU4     --------->ARR14(2) ------->GAMYB--------->LBD16         --------->HSFB2a(1)      --------->ICU4  <---------ZAT18   <---------ATHB12 --------->ANAC46         <---------HSFB2a(1)      <---------YAB1  --------->ZAT14  --------->ANAC58  --------->ANAC55(1)   =============HOX2a_HOX2a -------ANAC58        <---------ZAT14  --------->ANAC58 <---------LBD16  ---------->DOF2          --- -------ANAC58        <---------At4g35610 --------->MYB52(1)<---------ARR14(2) <------ZmHOX2a(1)  --- --AtLEC2   ----------------->AG<----------DOF2------>MYB46(1)--------->DEAR3(2) ----------->ARR10---   gcttccacatgattacccaatttgtgcagaccttctttcacaatcaaccgaacccaaacccggaaccgaagttacaaaagaggaagatccgacagggtat  1651800                                       <---------ANAC46                                     <-----------HVH21                                  <---------ANAC58                                  <---------ANAC58                                  <---------ANAC46                             <------ZmHOX2a(2)                            <-----------ARR10                            --------->ARR14(2)        --------->DEAR3(2)  <---------ARR11(3)      --------->ARR14(2)    <---------ARR11(1)      <---------ARR14(2)    <---------ARR14(2)   <------MYB46(1)          --------->ARR11(3)  <---------ARR14(2)   <------MYB83            <---------CCA1(2)  <---------DEAR3(2) <--------P    <---------ZAT18 <----------DOF2<------MYB46(1)   <---------ANAC46 -----MYB46(1) --------->ZAT18<---------HSFB2a(1)     <----------DOF2                             <-- -----MYB83    <-------TEIL<---------ARR14(1) <------MYB83     <-------TEIL                    <----- ------>MYB59  --------->ZAT14------>ZmHOX2a(2) --------->ARR14(2) <---------MYB52(1)       --------- ------>MYB46(2)       <---------ARR14(2)    --------->MYB59<---------ANAC58              <---------- ------>MYB111(1)      --------->ARR14(2)   <-------TEIL    <---------ANAC58       <xxxxxxxxxxxxxxxxsmallRNA(i)   taggtagggaaccgaagtgcattcgaatcggatctttcgggtcgggttcggttcgggtttttgggttcgggtattttgtccaggcctgattttaactctg  1651900                        <---------STY1(1)        --------->ICU4                        --------->STY1(1)        <---------YAB1                     --------->ANAC58       --------->ANAC46                   <-----------GT1   ----------------->AG                 <-----------HVH21 <---------ARR14(2)       <---------HSFB2a(1)        --------->GLK1(1)                             <-------TEIL       --------->HSFB2a(1)       <---------KAN4(2)                           --------->GLK1(1) --------DOF2   --------->bZIP60(1)<---------ARR11(3)              --------------->AGL15 ----YAB1       <---------bZIP60(1)--------->ARR14(2)              <---------------AGL15 >ZAT6 <---------HSFC1(2)        ---------->TaMYB80                ================================== -GT1<---------ANAC46--------->ANAC58==============================================MADS_MADS  <------   atttatggagggttcttgatgtcaccctaggcgagaatatccatataagtcattatagtcatggtgtctctcttaagggaaattcatattggtttgctaa  1652000                                                                                                  ---                                                                                                  <--                                                                                                 <<<<                                                                                             <-------            <---------YAB1                                                                <---------ARR11(3)         ----------->HVH21                                  <------NtERF2                 --------->ARR11(3)       ----------->GT1                     ---------->DOF2 --------->RAP2.3(2)           --------->GLK1(1)      --------->DAG2               <XXXXXXXXXXXXXXXXXXXXMIR859                           <---------GLK1(1) =========MADS_MADS              <---------YAB1            --------->RAP2.6(2)       <---------ANAC46 ---------AGL15            <---------TOE1(2)        --------->CCA1(2)<----------DOF2<---------LBD16   aacaagagaaggtgacaattgttttctactaggttttgatttcacaaaagagagatttgggccgcatttgtctttgccatttgagtttcggagttcttta  1652100                                             <---------TOE2(3)                                      --------------->AGL15                                      <---------------AGL15                                     ----------------->AG                                     <-----------------AG                                     <-----------------AGL2                                     ----------------->AGL1                                     ----------------->AGL3 <-----------HVH21                                     <-----------------AGL3<---------ZAT6                                 <---------ANAC58      ------>ZmHOX2a(2)                                 <---------ANAC58     <------ZmHOX2a(2)                                <---------At4g35610  --------->AGP1 ------>ARR11(3)                <---------ZAT2       <---------ARR11(3) -------ARR11(3)                --------->ZAT2       --------->ARR11(3)            <---------YAB1 <<<<<RAP2.2          <---------HSFB2a(2)    <---------TOE1(3)        --------->AHL20(2) ---DOF2         <---------ZAT6 --------->At4g35610  <---------AGP1   <---------AHL20(2)  <---------YAB1   gatattgggactctatctagtgttagagaagagcagcttgccattttagggtttagatctagtgtcacaaaattatatgtttgttttgatttatcaatgt  1652200                                                                                                    -                                                                                                  <--                                                                                                  <--                       <-----------GT1                                                            <--                     <---------AHL20(2)                                                          ----                     --------->AHL20(2)                                      ----------->GT1     <---                 <---------YAB1    --------->ANAC46         --------->MYB111(1)                <-----               <-----------GT1  <---------AHL20(2)  --------->YAB1        --------->CCA1(2) <--------           <---------ARR11(3) <---------YAB1       <---------YAB1      ----------->ARR10   --------->AHL20(2)           --------->ARR11(3)--------->AHL20(2)  --------->YAB1   <---------ZAT6     ----------->GT1-   ggattagagtttagattttacaattaaacaatattatatgccagtttgaatttataatagagtagttagtgtttagatttgggaaaaatgttatttaata  1652300  Previous    Next  AGI:  At2g04710.1    Description:  transposable element gene. hAT-like transposase family (hobo/Ac/Tam3), has a 1.6e-29 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays) Range:  from: 1650509    to: 1651753    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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