Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------ICU4                                                 --------------->AGL15                                                 <---------------AGL15                                                 ------>ZmHOX2a(1)                                                ----------------->AGL3                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <---------ARR11(3)                                             --------->ARR11(3)                                             --------->ARR14(3)                                             <---------ARR14(3)                                             --------->ARR14(2)                                             <---------ARR14(2)                                         --------->YAB1                  <---------AHL20(2)    <---------ATHB12    ----------->GT1                 --------->AHL20(2)--------->ANAC55(2)    ---------->DOF2              <------ZmHOX2a(1)=======================HOX2a_HOX2a        ---------->DOF2        ======================HOX2a_HOX2a                    ----------->GT1 -----ETT(2)  ----------->GT1  ------>ZmHOX2a(1)<---------MYB59  <-----------GT1 <---------CCA1(2)   gacaaaaaaaaaaagaggattaaatctaaggtccttcatgtaatcaagatcctaatttcagaaagtttaactattttgagaccatatcgtttaaaaccca  1594300                                  --------->CCA1(2)                                 --------->ARR11(3)       <---------AHL20(1)                                 <---------ARR11(3)       --------->ARR11(3)                               ----------->ARR10          --------->AHL20(1)                             --------->CCA1(2)            <---------ARR11(3)   <---------ICU4    --------->ICU4                      --------->AHL20(2)             <----------DOF2  <---------YAB1     <---------YAB1                  --------->AHL20(2)   <---------ETT(2) --------->TOE2(3)  <---------TOE2(3)          --------->ANAC46           --------->ETT(2) --------->YAB1   aaacattattccaacttgaattgatgatgagataagatatgtagaccctactcaactaaatatatcatttagtctctcgacagataattcctttcataaa  1594400                                               --------->ARR14(2)                                    <---------DAG2--------->TOE2(3)                 <---------AHL20(2) <----------DOF2                                          --------       >>>>>>>>>MYB2              <---------------AGL15                                --------->ANAC46       >>>>>>>>>MYB1              --------------->AGL15                           --------->ZAT18      --------->MYB52(1)         ----------------->AGL2 --------->YAB1            <---------ZAT18      ------>MYB83               <-----------------AGL2<---------ATHB12           <---------ZAT14      ------>MYB46(1)           <-----------GT1<---------ARR14(2)                 --------->ZAT14  --    <---------MYB59            <-----------GT1<---------CCA1(2)<----------ID1 <---------------AtSPL8   ctgaaacctaactgaagaattaatacacaaatatttccctttttagtcatatccctaatcatataactacaaaaatttagagagtacacacatagcaaag  1594500                                              ------>MYB83                                              ------>MYB46(1)                                            --------->AtMYB61                                       <                  <---------ZAT14           <---------MYB59                                        <-                  --------->ZAT14           --------->MYB46(3)                                    ---           ---------->DOF2            --------->MYB52(1)               --------->YAB1            <---       ----------->GT1             <------NtERF2                       <---------ICU4            ----       ------->GAMYB            --------->At4g35610                   --------->ICU4             ----    --------->MYB52(1)   --------->ICU4 --------->MYB46(3)          --------->YAB1             ------ -->DOF2--------->At5g28300     <---------At4g35610               --------->AHL20(2)     <-----------GT1 ------->WOX13(1) --------->ZAT18 --------->RAP2.6(2)        ----------->GT1        <---------GLK1(2)   tcaatccaacggtaaaagagagcagtattgatggagcggcaaacgaccaaacaacaaatcgtgctgaaaataataatgtctcaccagaatttttcagcat  1594600        --------->ANAC58        --------->ANAC58        --------->ANAC46 ---------WOX13(1) -----------CBF ------>ATHB12------->GAMYB ------AHL20(2)             ------------>CBF                                                 -------- ----->ICU4  --------->MYB46(3)    <-----------GT1                                           <------- ----->AHL20(2)         ------>ZmHOX2a(1)                         ---------->DOF2        <-----------GT1 --->TOE2(3) <---------MYB52(2) <---------ATHB12     --------->YAB1   *TSS          <----------DOF2   taattgaaacacacaacaaacctctccttattcaatgaaaccacatttcaaacactcatgttttcttataaagagaggcctctattcttttatacagctc  1594700                        --------->TOE2(3)                        ------->GAMYB                       --------->MYB46(3)                  <---------ICU4                  --------->YAB1                                                                 ----                 <<<<<<<<<ARR1                                                                  -----                 <---------ATHB12                                                               -----      --------->ZAT6   <----------ID1            --------->TOE2(3)                              ----- XXXXXXXXXXXXXXXXXXXXX>MIR2935                <---------ALFIN1                                  ----- ->At4g35610     <<<<<<<<<ARR2             ----------->HVH21                 ------>ZmHOX2a(1)  ----- --At4g35610--------->YAB1          --------->ZAT6   ---------->DOF2   <----------DOF2          -----   atggaatcacactatcacaatcataaccacaaaaacaaacactatgggacacctcaaaagtctcttcacaattcttttcctaatagctatgtcttcaacc  1594800         ----------->GT1        <---------ATERF1(2)                               <------NtERF2        --------->ATERF1(2)                              ------>NtERF2       <---------LBD16                                   --------->LBD16       <---------ANAC46   --------->YAB1                <---------ANAC46                        <---- ----->At5g28300     --------->LBD16                    <---------LBD16                   --------->ANAC58 ------>GT1         --------->ANAC46                    --------->LBD16                   --------->ANAC46 ---->YAB1--------->At5g28300                    <---------MYB52(1)                   --------->HSFB2a(2) ---->ANAC46       <---------LBD16              <-------GAMYB                   <-----------RAV1(1) ---->TOE1(3)      --------->TOE1(2)           <---------ANAC46                <------------AtMYB77 ---->TOE2(3)    --------->MYB52(1)    ------>NtERF2   <---------LBD16 <---------CCA1(2)  --------->ANAC58 -->GAMYB--------->LBD16 <------ZmHOX2a(2)--------->HSFB2a(1)    --------->MYB46(3)   <---------HSFB2a(2)   gtaacatttgccggtaaaatacccgcgatcatcgtgtttggcgactcttccgttgatgccgggaacaacaactatatcccaactgttgctagaagcaact  1594900                                        --------->SPL7                                  <---------RAP2.6(3)                                  ------>NtERF2                                  <---------SPL7                                 --------->DEAR3(1)                                 ----------->HVH21                             <---------GLK1(1)                            ---------->DOF2                       <------MYB46(1)----------->HVH21              <---------ARR14(2)                       <------MYB83--------->MYB52(1)     --------->ATHB12                       <---------MYB46(3)              ---------->DOF2                      <---------AtMYB61--------->MYB52(1)--------->ICU4 <---------AHL20(2)                   <-----------RAV1(1)<---------SPL7 ------->GAMYB<---------ANAC46 ------DOF2      <----------DOF2--------->DEAR3(2)--------->MYB52(1) --------->ARR14(2)             -   ttgagccatatggacgggactttgttggtggaaagccgaccggacggttttgtaacggaaagattgcgacggattttatgtccgaagccttagggcttaa  1595000            <---------SPL7            <---------ZAT18           <---------ANAC58           <---------ANAC46           <---------ANAC58         --------->LBD16                                              --------->ZAT2         ------>NtERF2                                                --------->At4g35610        <---------RAP2.6(2)    <-----------GT1                        <---------At4g35610        <---------LBD16    <---------YAB1                        <---------ANAC58       <---------LBD16  ------>ZmHOX2a(1)                        <---------ANAC58   <------------ATHB5 <---------HSFC1(2)                 <-----------GT1 ------>NtERF2         ------   -------->ATHB1     --------->HSFB2a(1)             --------->ALFIN1<---------ZAT2         <-------   --------->YAB1     ------>ZmHOX2a(2)           ===============================RAV       ------->GAMYB   <---------ICU4     --------->HSFC1(2)          <-----------RAV1(2)<-----------RAV1(1)  --------->ANAC46  <---------ATHB12    <---------HSFB2a(1)       ----------->RAV1(1)<---------At4g35610    --------->ANAC58 ------>MYB83        <------ZmHOX2a(2)   --------->ARR14(2)  <----------DOF2         --------->YAB1 ------>MYB46(1)    --------->ARR14(2)   <---------ARR14(2) --------->TOE2(3)       ----------->HVH21 -------->WOX13(1)  <---------ARR14(2)   <---------GLK1(2)  <XXXXXXXXXXXXXXXXXXXXMIR834   --------->ANAC58   accaatcattccggcgtacttggatccttcttataacatttcggattttgcaacaggtgttacctttgcttctgctgccactggctatgacaacgccact  1595100                                                               --------->ANAC55(1)                                                               <---------O2                                                               --------->ANAC46                 <----------DOF2                               --------->O2            --------->ANAC58                                   --------->ANAC58            --------->ANAC58                                   --------->ANAC55(2)           --------->SPL7                                    <---------ALFIN1               <--------       <---------------AtSPL8                         <---------MYB59                       ---------       <---------HSFB2a(2)         <---------AHL20(2)<---------ANAC55(2)            <---------WOX13(1)       --------->HSFB2a(2)         <---------ICU4  <-----------GT1 <----------DOF2--------->ATHB12 --->O2<---------------AtSPL3     --------->ICU4----------->GT1--------->ANAC58  <---------YAB1   --- --ALFIN1<---------SPL7           --------->AHL20(2) --------->ANAC55(2)       --------->YAB1--------   tctgatgttctggtacggacttttctctcccttgtatttattacattgatatgttacataactacacgtctttatagacatttatgattgatgagatata  1595200  Previous    Next  AGI:  At2g04570.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT2G42990.1); similar to unknown [Populus trichocarpa] (GB:ABK95299.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 1594670    to: 1596346    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version