Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->ANAC46                   --------->ANAC58                   --------->ANAC55(1)                                               --------->MYB52(1)                   --------->ANAC58                                  <---------ARR14(2)                   <---------ANAC55(2)                 --------->ANAC58    --------->ATHB12        ==        ----------->GT1                                --------->ANAC46  <<<<<<<<<<<<<<<<<LFY      ==       --------->DAG2                       --------->At4g35610      --------->ARR14(2)            --   --------->YAB1  --------->ANAC55(2)   ---------->DOF2     ---------->DOF2--------------------->WRI1 --------->AtLEC2 <---------LBD16 <-----------RAV1(1)  --------->ANAC58  ------>ZmHOX2a(1)         <-   accattcaaaaggttactcacacggaatttatacaaatgtggcaaaagctcccatacacccattacagccaaatcctccattggaaacaacgaattcaat  1592300                 <------ZmHOX2a(2)                --------->ARR11(3)                --------->ARR14(2)                <---------ARR11(3)                                                                 --             <---------TOE2(3)                                                                     <-  <---------ANAC58 --------->WOX13(1)           --------->HSFB2a(1)                                --  <---------ANAC58------>ZmHOX2a(2)        <-------TEIL                                        ------ =======================HOX2a_HOX2a       --------->CCA1(2)                                --------->YAB1 ========================HOX2a_HOX2a ---------->DOF2                                   <----------DOF2 ---->ZmHOX2a(1)<---------ARR14(2)--------->ANAC58       <----------DOF2         --------->YAB1------ ---------DOF2  --------->GLK1(2) --------->ANAC58       <---------DAG2        --------->GLK1(2)   <-   cctttcttgcacatcaaggatctatcaatttgtaagaagcaaagatacaaatgttccaactttatgaaattttcaattgagaatcaaaacttttcataag  1592400          <---------LBD16         --------->ALFIN1    <---------------AGL15    --------------->AGL15   <-----------------AGL2       --------->ANAC46 ------->HSFB2a(1)        <---------ANAC58 --------HSFB2a(1)        <---------ANAC58 ------->HSFC1(2) --------->ANAC58                                    <----------DOF2 --->ANAC58     --------->GLK1(1)                          --------->DAG2 --->ANAC58<---------ANAC46  -------->P                   ---------->DOF2 --------HSFC1(2) --------->ANAC58 <---------ALFIN1   <---------MYB46(3)          <------ZmHOX2a(1)   aaacttctaaattgggggaaacccaagtgcttaccctccaactccattgaaacggatgggtaaaggagagagctttttaagcgaggacataagacgagaa  1592500                       --------->LBD16                      --------->DEAR3(1)                     <---------LBD16               --------->HSFC1(2)                                                                   -               --------->HSFB2a(1)                                                                  -               <---------HSFB2a(1)                                                                  <               <---------HSFC1(2)                    --------->ATHB12               --------->At4g35610             --------->ARR14(2)            --------->GLK1(1)          <---------ATHB12         <-----            <------NtERF2                  --------->At4g35610        --------->MYB46(3)     --------           --------->LBD16                 <---------ZAT2           --------->WOX13(1)      ---------          --------->LBD16                  --------->ZAT2   ------>NtERF2        <---------At4g35610-         <---------LBD16<------NtERF2      <---------At4g35610   <-----------HVH21  --------->ZAT2  <   ccgatgttatcgccggaaacttcgccggagacgatgaaaactctgagctccccatcgattgcagccttgtcaatcaccgatttagcagcttgaaatgatg  1592600 -------->ARR14(2) -------->GLK1(2) ---------ARR14(2) ----YAB1                                                      <---------ANAC46 ->YAB1                                                --------->YAB1 >ICU4                                          <---------At4g35610                        ---------- -------->ARR11(3)                              --------->At4g35610             --------->YAB1------- ---------ARR11(3)                       <----------DOF2  <---------ICU4      --------->GLK1(2)    --   agtatctcttagtgaatgttgagagagggaaacgaagtttgctctttgtaatctgaaacatcatttcggagaagagagagaatcaaaaactctgaaagag  1592700      <---------ANAC46                  --------->GLK1(1)     ----------->STF1                   <---------GLK1(1)   ----------->HVH21                   <---------ARR11(3)   ----------->TGA1                    --------->ARR11(3)                           --------->YAB1 >DOF2<---------bZIP60(2)        --------->ANAC58                         <---------ALFIN1 -->DAG2 ----------->GT1         --------->ANAC58                        --------->ZAT18           -- -------->DOF2 ------------>CBF---------->DOF2        <----------DOF2    <---------ZAT18     <-------   tgaaagtgacgttgttaaacaatgaactgcgatgaaagcaagatttctcatggggactttaatgggcctcttaagcccacttcttatcagcatgttattg  1592800                   --------->ANAC55(2)                                                  <------------CBF                 <---------YAB1                                                <---------ANAC58      --------->WOX13(1)                                            --------->ARR11(3)<---------YAB1    <---------ATHB12                                         <------------CBF  <---------ANAC46 ---->NtERF2  <---------ZAT6        --------->YAB1          --------->ATHB12   <---------ANAC58 -----CBF--------->YAB1     <------ZmHOX2a(1)      <---------At5g28300    <---------AtLEC2         <-   aggcccatcagtcatagtgatacttgtttaggagacagtgatagttatagacttacagtgagtgattgtagatgttgaatggcctatgtttattgttttt  1592900                                                                                    <---------AHL20(2)                                                      <------------------------ANAC81                                         <---------------AtSPL8                     --------->AHL20(2)                                         --------------->AtSPL8       <---------WOX13(1)----------->GT1              <---------ANAC55(2)        <---------ICU4              >>>>>>>>>ARR2 --------->AHL20(2)              --------->ANAC58       --------->AHL20(2)             --------->ATHB12--------->AHL20(1) ------>ZmHOX2a(2)                   <---------AHL20(2)   <----------DOF2   ----------->GT1         < --------AGP1 --------->ANAC58   ----------->GT1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       -----   ggatctaaaacttatcaagtaagagtttttttcttctgttaaattagtactccatctgttcttttttgtttgattgtttagaaaaaaaaattgtttaaaa  1593000                                                                               --------->ATHB51                                      --------->ICU4                           --------->ATHB12                                      <---------YAB1                          <---------YAB1                                    --------->YAB1                            <---------AHL20(2)                          <---------ICU4                                    <---------ICU4                          --------->YAB1                                 <---------AHL20(2)                          <--------ATHB1                                <---------AHL20(2)                          -------->ATHB1                                --------->AHL20(2)                          --------->ATHB51                             <---------YAB1          <---------TOE1(3)      --------->MYB52(2)                  -------->ATHB1          <---------TOE2(3)    <---------MYB52(1) ----------->GT1    <---------ICU4      <---------AHL20(2) <---------ATHB51     <---------AHL20(2)    --------->AHL20(2)    <---------YAB1       <---------ATHB12     --------->AHL20(2)    <---------AHL20(2) ---------GLK1(2)        --------->ICU4  <---------WOX13(1)         <---------ATHB51         -------- ----->DOF2              <---------YAB1--------->ATHB51             --------->ICU4        <---------ZAT6   aagattattttttaggttttcaatgcaataattgttagttataattgataaattgtaaacttcgatacaaattattaaatattattggtttagagttatt  1593100                                                                                       ---------->DOF2                                                                                      <xxxxxxxxxxxxxx                                                                               <------ZmHOX2a(2)                                --------->ANAC58                              -----------------------                           --------->AHL20(2)                                <------ZmHOX2a(1)                     --------->At5g28300     <---------TOE2(2)           ---------->DOF2--------->DAG2            --------->ANAC58    --------->ANAC46                         --------->MYB52(1)            --------->ANAC46  ---------->DOF2<---------TOE1(2)          ------>ZmHOX2a(1)            <---------ANAC55(2) --------->ANAC58                        ==============HOX2a_HOX2a   ----------->GT1  ----------->GT1----------->RAV1(1) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ->ATHB12   --------->ANAC58<---------AHL20(2)      --------->TOE2(3) ----------------->AG   gaaaattgtaaatcacgaaaaacagtaaatttaaaagcaacatttcatatgttttcttaatatttgtgtttttcctaaaggatcaaacaaaaaggaacag  1593200  Previous    Next  AGI:  At2g04560.1    Description:  transferase, transferring glycosyl groups. similar to unnamed protein product [Vitis vinifera] (GB:CAO24084.1); contains InterPro domain Glycosyl transferase, family 19; (InterPro:IPR003835) Range:  from: 1590303    to: 1592664    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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