Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------AHL20(2)                                                                 --------->YAB1        --------->AHL20(2)                                       <---------ICU4        <---------AHL20(2)                                       --------->AHL20(2)       --------->AHL20(2)                                        <---------AHL20(1)      <---------YAB1             --------->AHL20(2)              <---------AHL20(2)   <---------AHL20(2)            <---------AHL20(1)              <--------ATHB1             <--------   <---------YAB1                <---------AHL20(2)             --------->ICU4              --------- <---------ICU4             --------->AHL20(2)                --------->YAB1              --------->AHL20(2) -------->ICU4           <---------AHL20(2)                  <---------AHL20(2)           <---------AHL20(2) ------>AHL20(2)         --------->AHL20(2)                  --------->AHL20(2)         --------->AHL20(2) ----->AHL20(2)         --------->AHL20(2)                  <---------AHL20(2)         <---------AHL20(1) ------AHL20(2) --------->YAB1   --------->AHL20(1)         --------->AHL20(2)    --------->AHL20(2) -----AHL20(1)  -------->ATHB1 <---------YAB1            --------->AHL20(2)     ------>ZmHOX2a(1) ->AHL20(1)     --------->ATHB12--------->YAB1        --------->YAB1--------->AHL20(2) --------->AHL20(1) ->AHL20(2)     <---------ICU4--------->AHL20(2)     <---------YAB1 <---------AHL20(2)--------->AHL20(2) --AHL20(1)    <---------YAB1<---------AHL20(2)     --------->ARR11(3)         --------->TOE1(3) --AHL20(2)--------->AHL20(2)--------->AHL20(2)     <---------ARR11(3)         --------->TOE2(3)   taatttttattaaaaaaatcattgtataaaattaatataatatgctctcatcaatatcataaattaataattttataaattccttaaaatatatatatat  1576300                                                                                                    -                                                                                                    <                                                                                               ------                                                                                               <-----                                                                                               <-----                                                      <-----------GT1                    --------->ANAC55(2)         <---------ZAT6           <----------DOF2--------->AHL20(1)        <-----------RAV1(1) ------ -AHL20(2)          --------->TOE2(3)       --------->AHL20(2) --------->YAB1            --------->YAB1 >AHL20(2)    --------->YAB1      <---------DAG2 <---------AHL20(1)    <----------DOF2   --------->ANAC46   aagaaattttagtgaaacataacctttgctatattcctttttcatttttaatatttttactacattcaaaactctttttgttgttgtctatacataataa  1576400            <---------YAB1        <---------ICU4      --------->AHL20(1)          <--------ATHB1      <---------AHL20(2)          -------->HAHB4     <---------AHL20(2)           <--------HAHB4     <---------ICU4               --------->ATHB51     --------->ATHB51             --------->YAB1     --------->AHL20(2)          --------->AHL20(2)        <---------HSFB2a(2)    --------->ICU4               <---------YAB1            --------->HSFB2a(2) <---------YAB1                  --------->ICU4       <----------DOF2 --------->AHL20(2)            --------->YAB1      <---------ARR11(3) <---------AHL20(2)          --------->ARR11(3)    --------->ARR11(3)           <-----------GT1 -------->AHL20(2)           <---------ARR11(3)    --------->GLK1(2)         <---------ICU4 ---------AHL20(2)         ----------->GT1        --------->CCA1(1)<---------ARR11(3) --->AHL20(1)            ---------->DOF2        --------->AHL20(2) --------->ARR11(3) ----AHL20(1)         <---------HSFB2a(2)   --------->AHL20(2)    --------->CCA1(1) ----AHL20(2)         --------->HSFB2a(2)  --------->AHL20(2)     --------->RVE1(1) --->AHL20(2)  <---------WOX13(1)<---------ATHB51 --------->RVE1(1)--------->GLK1(2)           <-----   attttaattattttgtaattggttctaaaaagataataattacaaataaaaaaaatcttttttagaaaaaatcttttaaaaattacaaaattagtttaaa  1576500                                      --------->AHL20(2)                                <---------AHL20(1)                                --------->AHL20(2)                                <---------AHL20(2)                        --------->AHL20(2)                     --------->YAB1   <---------AHL20(2)                  <----------DOF2<---------AHL20(2)            --------------->AtSPL8    --------->AHL20(1)            <---------------AtSPL8    <---------YAB1         <---------AHL20(2) <---------AHL20(2)         --------->AHL20(2) --------->AHL20(2)        --------->AHL20(2) <---------AHL20(2)         ----------->GT1        <---------AHL20(2) --------->AHL20(2)    <---------YAB1             ----------->GT1     --------->AHL20(2) <---------AHL20(2)     --------->YAB1         --------->AHL20(2)     <-------TEIL ------GT1  <---------------AtSPL3   --------->AHL20(2)         --------->TOE2(3)    <-----------RAV1(1)   ctctctataaattaatagtacttttataaattaataaaattttattgtatgatgaatagttgaatacctctataaattttgttacaaatgttggatacat  1576600                                            --------->YAB1                                           <<<<<<<<<ARR1                                           <<<<<<<<<ARR2                                        <----                                 ------->GAMYB   --------->MYB46(3)                             <----                              <-----------GT1 ------>ZmHOX2a(1)                                ------                              --------->MYB52(1)-------->P                                <---------AHL20(2)                  --------->ANAC46         <<<<<<<<<ARR2      --------->LBD16             --------->AHL20(2)        ------------>CBF  ------>MYB46(1)  <<<<<<<<<ARR1    <---------LBD16         <------ZmHOX2a(2)       <-----------GT1    ------>MYB83 ------------>CBF  ---------->DOF2           <---------AGP1   atatacaaattacaatctatactaaaccaaattaaccgaaaaacaatcctaaccagcattaaaccggagctatacatatgtagtagatcagtttaatttg  1576700      *TSS    ------------>CBF        <----------DOF2                        --------->GLK1(1)   --------->ANAC58        --------->MYB52(2)                      <---------GLK1(1)   --------->ANAC58      <---------MYB52(1)                       <---------ARR14(2)   --------->ANAC46     <---------RAP2.6(3)                       --------->ARR14(2) --MYB83         ---------->DOF2                                 <------ZmHOX2a(1) --MYB46(1)  --------->ANAC58                            ----------->HVH21         --------->LBD16 --->MYB59   --------->ANAC58                           <---------WOX13(1)     --------->TOE2(2)-----   gtctcactcaatcccaagaaaaaggccgttctttgcattttctatcgtttcatgtctgagtgacagaggaaaccccaaaaacctccgtaaaacctcacaa  1576800                                                        ------>MYB46(1)                                                        ------>MYB83                                                      <---------MYB111(2)                           <                                        <-----------ARR10                                           -                                        --------->ARR14(2)                                     <-----                                        <---------ARR11(3)                                    <------                                        <---------ARR14(3)                                    <------NtERF2                                        --------->ARR11(3)                                    ------>NtERF2                                        --------->ARR14(3)      ---------->DOF2              --------                                        --------->GLK1(2)--------->MYB46(3)                  --------                                  ------>MYB46(1)     <---------MYB46(2)                    ---------        <----------DOF2           ------>MYB83        <---------MYB55(2)               --------->ZAT2      --------->At4g35610       --------->DEAR3(1)    --------->AtMYB61                <---------At4g35610      <---------At4g35610      <---------At4g35610    <---------MYB111(1)              <---------ZAT2     ------->TEIL              --------->At4g35610    --------->MYB46(3)               --------->At4g35610 ----->DOF2  <<<<<<<<<TBF1   <-----------GT1         --------->ANAC46     <---------ATHB12<---------DEAR3(1)   aagaatgcagctttcttcttcgtttccaatttcacctcccaaaatcttcccttccaccaaacaccataaacctccagtgattactcaccagctcgccgca  1576900  <-------TEIL --------->CCA1(2)                  ---------->DOF2                                               --- ---------ARR14(2)     <---------ANAC46                                                    --------->ARR14(2) -------->ARR14(2)     <---------ANAC58                                                    <---------ARR14(2) ----ALFIN1            <---------ANAC55(2)                                                 --------->GLK1(2) ---SPL7  -------->P   <---------ANAC58                                                    --------->MYB52(1) ->RAP2.6(2)   <---------ETT(2)    <---------WRKY12                               >>>>>>>>>TBF1   --- ->DEAR3(1) --------->TOE2(3)    --------->LBD16                              <------ZmHOX2a(1)  <--- >RAP2.3(1) ------->GAMYB        <-----------HVH21                          <---------TOE2(3)   -----   cagatacagagcaaccgtagacatttcgtgagtcccgtcaaagtctctggctatttctcatcgattagccgagctattgaggaagaagaagagtatcgga  1577000             --------->ZAT14                                             --------->TGA1a        <---------ZAT14                                                  --------->ANAC58        --------->ZAT14                                                  <---------TGA1a     --------->At4g35610                                                 --------->ANAC58    --------->ANAC46                                                     ============================   <-------MYC2                                                       <---------PCF2   ------->MYC2                                                       --------->ZAT18   <-------PIF5                                                    --------->ALFIN1   ------->MYC3                                                  <------MYB83   <-------PIF4                                                  <------MYB46(1)   <-------MYC3                                                 <---------AtMYB61   ------->PIF4                                           ------>ZmHOX2a(2)   ------->PIF5          --------->ALFIN1                <---------GLK1(1)  --------->ANAC58   --------->DAG2                      <------ZmHOX2a(2)  --------->ANAC58  ---------->DOF2                      --------->GLK1(1) ------>ANAC58   --------->TOE1(3)                      --------->ARR14(2)                       ---- ------>ANAC58 ------->TEIL<------NtERF2                <---------ARR11(3)                    ------- -----------OsCBT--------->TOE2(3)                      --------->ARR11(3)                  --------- ----->DOF2  <---------ZAT14          <---------ZAT6    <---------ARR14(2)        <---------ZAT6 <---   aagcacgcgctgcagtgaaccgtaaaggtgtcgaattggagagttatgcaattgaagggatctctgtaggtgggcacgagacttgtgttatcgtccctga  1577100                          --------->ZAT18                        --------->ATERF1(1)                       <---------At4g35610                       <------MYB46(1)                                                        <------                       --------->At4g35610                     --------->ZAT6               <-------GAMYB                       <------MYB83                         <-----------GT1            <---------ANAC46                       <---------ATERF1(1)              <----------DOF2                <---------ANAC58                      <---------DEAR3(1)           <---------HSFB2a(1)                 <---------ANAC58 ====================bZIP_DOF     <---------ANAC58 --------->HSFC1(2)                --------->ARR14(2) ----->At4g35610      <---------AtMYB61            <---------HSFC1(2)                <---------ARR14(2) -->LBD16 <----------DOF2 <---------ZAT18    <---------At4g35610               <---------WRKY18(1) -->RAV1(2)  --------->YAB1       <---------ANAC58 --------->HSFB2a(1)      <---------ICU4 --------->MYB52(2) ------At4g35610      --------->ALFIN1       --------->At4g35610  <---------ATHB12  <---------CCA1(2)   gctcaaatgtgtctttgatattgggaggtgcccttctcgtgctattcagcagaagtttctttttatcactcatgcccatcttgaccatatcgtgagttgt  1577200  Previous    Next  AGI:  At2g04530.1    Description:  CPZ. Identical to Ribonuclease Z, chloroplast precursor (CPZ) [Arabidopsis Thaliana] (GB:Q8L633;GB:Q8LGU8;GB:Q9SJB8); similar to NUZ [Arabidopsis thaliana] (TAIR:AT1G74700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24090.1); contains domain SSF56281 (SSF56281); contains domain PTHR12553:SF4 (PTHR12553:SF4); contains domain G3DSA:3.60.15.10 (G3DSA:3.60.15.10); contains domain PTHR12553 (PTHR12553) Range:  from: 1576706    to: 1578738    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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