Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->AHL20(1)                                                             <---------AHL20(1)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                             <---------AHL20(2)                                            <---------AHL20(1)                                       <---------AHL20(2)   --------->AHL20(2)                                       <---------AHL20(1)   <---------AHL20(2)                                       --------->AHL20(2)   <---------------AGL15                  <-                                       --------->AHL20(1)  <---------YAB1               <---------TOE2(3)                                      --------->YAB1     -------->ATHB1  --------->RVE1(1)       ----                                  --------->AHL20(2)     <---------ICU4 --------->ARR11(3)   --------                                  <---------AHL20(2)    --------->AHL20(2)            <---------AHL20(2)         <---------HSFB2a(2)      --------->AHL20(1)    <---------YAB1  <---------ARR11(3)   <-------   --------------->AGL15         <---------AHL20(2)     --------->ICU4  --------->GLK1(2) <---------ICU4   =========================================================================MADS_MADS --------->AHL20(2) -----------GT1            --------->YAB1   <---------AHL20(2)     ----------->GT1   <---------AHL20(2) ----ANAC58               <---------YAB1<---------YAB1  --------->AHL20(1)        <---------AHL20(2)< ----ANAC58       <---------ICU4 --------->AHL20(2)     <---------AHL20(2)   <----------DOF2<-------- ----ANAC46    --------->YAB1 --------->AHL20(2)      <---------ICU4<------ZmHOX2a(1)--------->AHL20(2) ----GT1 --------->HSFB2a(2)  --------->YAB1--------->AHL20(2)    --------->MYB59 --------->AHL20(2)-   tgtaactggttttagaaacataatttctataataaaaaaattataattttttttaaaaattattaaattaggaaaatctctttataaattaatatttatt  1573200            <---------AHL20(2)                              <---------AHL20(2)            --------->AHL20(2)                           <---------AHL20(2)        --------->AHL20(2)                               --------->AHL20(2)     --------->YAB1                    <-----------GT1  --------->AHL20(2) --------->ATHB12                <---------AHL20(2)     <---------AHL20(2) --------WOX13(1)           --------->AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----->ATHB12  <-----------GT1  <---------AHL20(1)     <---------YAB1                    <---------ARR11(3) ->ATHB12  <---------AHL20(2)   <---------AHL20(2)  --------->ICU4                       --------->ARR11(3) --AHL20(2)--------->AHL20(2)   --------->AHL20(2)  <---------YAB1<---------TOE2(3) --------->AHL20(2) ---------AHL20(2)          <---------AHL20(2)     --------->TOE2(3)     <---------At5g28300       <- -YAB1  <---------AHL20(2) --------->AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->CCA1(1) -------->AHL20(2)         <---------AHL20(2)   ----------->RAV1(1)     <-----------GT1 --------->RVE1(1)   gatttattgataaattaatacctctctaaattaataaaatttcacagtcccaacattattaatttatagaggttttactgtattcaaaaaatatctctta  1573300                                           --------->AHL20(2)                                           <---------AHL20(2)                                          <---------AHL20(2)                                --------->ATHB12                                <---------AHL20(2)                               --------->AHL20(2)                                          <---------AHL20(2)                            <---------AHL20(2)                                          <---------AHL20(2)                            --------->AHL20(2)                                          --------->AHL20(2)                           --------->AHL20(2)                         <-----------GT1  <---------AHL20(2)                       <---------YAB1  --------->AHL20(2)       <---------AHL20(2)     --------->AHL20(2)                       <---------AHL20(2) --------->AHL20(2)   <---------AHL20(2)      <xxxxxxxxxxxxx                     <---------ICU4    <---------AHL20(2)      --------->AHL20(2)     <---------YAB1               <------MYB46(1) --------->AHL20(1)          <---------AHL20(2)      --------->ICU4               <------MYB83<---------AHL20(2) <-----------GT1  <---------AHL20(1)  <---------YAB1<---               ----------->GT1 <---------AHL20(1)          --------->AHL20(2)     --------->TOE2(3)              --------->MYB59  <---------AHL20(2)         <---------AHL20(2)    <xxxxxxxxxxxxxxxxxxxx --------AHL20(2)   --------->ICU4  --------->YAB1        --------->AHL20(2)   ----------->RAV1(1)   tattatcgacaactatttggtaatttttattaatttattgataaattaatacctctctaaattaataaaatttcacaatcccaacattattaatttatag  1573400                                                           <---------At4g35610                    --------->ARR11(3)              <---------AHL20(2)              --------->YAB1                    <---------ARR11(3)              --------->AHL20(2)   --------->ARR11(3)    <---------At5g28300                       <------MYB46(1)            --------->AHL20(1)   <-----------GT1 --------->RVE1(1)          ----------->GT1            <---------ARR11(3) xxxxxxxxsmallRNA(se3)        <---------AHL20(2)   --------->ICU4   <---------TOE1(3) ------TOE2(3) --------->AHL20(2)             <------MYB83<---------TOE1(3)   <---------AHL20(2) xxxsmallRNA(le3)  --------->CCA1(1)         --------->MYB59     <<<<<<<<<MYB98  --------->YAB1   aggttttactgtattcaaaaaatatctcttatattatcgacaactatttggtaattttttaagctaagttagggatatattaaaaataatcaaacaaaaa  1573500                                                                                           ------>MYB83                                                                   ----------->GT1         ------>MYB46(1)                                                              <---------AHL20(2)         <---------MYB55(2)                                                             --------->AHL20(2)          --------->MYB46(3)                                                             <---------AHL20(2)         --------->ANAC58                                                             --------->YAB1             --------->ANAC58                                                          <--------HAHB4               ------>MYB46(1)                 <---------ANAC46                         -------->HAHB4               ------>MYB83               <---------ANAC58                           <---------ICU4              <---------ALFIN1               <------MYB83                               <--------ATHB1             <---------MYB55(2)               <------MYB46(1)                            --------->YAB1             ------->GAMYB               <---------ANAC46                           --------->ATHB51           --------->MYB46(3)               <---------ANAC58                          <---------ATHB51          --------->ANAC58          <---------AHL20(2)                             --------->AHL20(2)        --------->ANAC58         <---------AHL20(2)                              --------->ICU4            --------->ANAC46         --------->AHL20(2)       ----------->GT1      --------->YAB1          --------->ANAC46     --------->ICU4           ---------->DOF2  ---------->DOF2--------->AHL20(2) --------->ANAC46   ---------->DOF2      ----------->GT1   <-----------GT1<---------YAB1    --------->AHL20(2)       -   aaaactaaagattaatttggtgtgaatggttcaaaagagtaatttaaccaaaagaaataataattaaaatggtgaaattatacacaacccacccactaat  1573600                               <---------ANAC58                               --------->ANAC55(2)                               <---------ANAC46                               <---------ANAC58                              <---------LBD16                          <-----------RAV1(1)                  --------->ANAC58                  <---------ANAC46                  <---------HSFB2a(2)                  --------->ANAC58                  <---------ANAC55(2)                 <---------LBD16<---------ZAT18                                       --------->CCA1(2)    ---------->DOF2--------->LBD16                <-----------GT1--------->ANAC58    <---------ARR11(3) --------->YAB1<---------ARR14(2)    <-----------GT1      ---------->DOF2---------->DOF2 ---------->DOF2 ---------->TBP--------->ARR14(2) *TSS       <----------DOF2     --------->ANAC58    --------->ARR11(3)   ctataaaaaagaaataggttccgcaaacttgttgcgcattcaccattctttttctcaattcaaaggcaagacacatagagcaagagagatataaagagag  1573700                                                   ----------->GT1                                          ----------->HVH21                                        <---------ANAC46                                        <---------ANAC58             <------ZmHOX2a(2)                                        <---------ANAC58             <---------YAB1                                 ---------->DOF2 --------->At4g35610<---------ARR11(3)                               --------->ANAC58=============================HOX2a_HOX2a                               --------->ANAC58<------ZmHOX2a(1)    --------->ARR11(3)             <-   <---------ZAT6 <---------GLK1(2)    <-----------------------TaNAC69(2)                        ----   agatagagatagatgagatggaatctcaaaaacaagaaagaagcgtgaaggagatgaaaatagtcactaagatcatagcatttgcatccattttctcatt  1573800                                                      <---------------AGL15                ------>ZmHOX2a(1)                     --------------->AGL15       <-----------GT1                               ----------------->AGL3        <-------TEIL     --------->YAB1                              <---------ANAC58       <---------ZAT18 ----------GT1 --------->TOE1(3)                 <---------ANAC58       --------->ZAT18 ----->YAB1    --------->TOE2(3)   ---------->DOF2   ----------------->AGL2    --------------->AtSPL3   tatactatcttactcttccttaatctcttctcttcaacaaagactccatttgcttgccatgtatagcaatcttgtggacaagaagtacatgttcttgtta  1573900                                                                 --------->ANAC58                                                               ---------->DOF2                                                             --------->At5g28300                                                            ----------->GT1                            --------->HSFC1(2)             --------->ANAC58                            --------->HSFB2a(1)         <---------SPL7                       <---------LBD16               <-----------HVH21               <----------DOF2          --------->GLK1(1)  --------->ANAC58               ---------->DOF2               <---------DAG2           <---------GLK1(1) --------->SPL7        --------->WRKY12           <---------ZAT18  <---------HSFC1(2)      <----------DOF2            <---------------------WRI1        --------->ALFIN1    <---------HSFB2a(1)    <---------DAG2--------->ANAC58   --------->MYB46(3)   tgcaatgggattgtgggctttatcttggggagtttccatgggaattctgactccctttcgcacggtaaagccattaacatcgttgaacaaaccaaagaag  1574000                                                             --------->ICU4                                                      ---------->DOF2                                               <---------ANAC46                  <----------ID1 --------->DAG2<---------ANAC58              ---------->DOF2   ---------->DOF2<---------ANAC55(2)         >>>>>>>>>TBF1   <------ZmHOX2a(2)   ---------->DOF2         <---------ANAC58     ---------->DOF2   tagggatcaaagacttaaaagaaacaaaagtcaataaagtagtggcattacttgaagaaagtaatgtttctaaagaagaagaaggaagagttgttttatc  1574100  Previous    Next  AGI:  At2g04515.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04495.1) Range:  from: 1573634    to: 1574475    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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