Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------ALFIN1                                                                                    <---------WRKY45                                                                                    <---------WRKY38(1)                                                                                    <---------WRKY12                                                                                   <<<<<<<<<<WRKY11                                                                <---------WRKY38(1)--------->WRKY18(1)                                                               --------->WRKY18(1) <<<<<<<<<<WRKY6                                       --------->YAB1        <------MYB83     --------->YAB1                                 --------->YAB1              <------MYB46(1)  <--------ATHB1                                 --------->AHL20(2)      <-----------RAV1(1)  <---------ICU4                              --------->YAB1         <---------YAB1          <---------ATHB12                            --------->AHL20(2)      <---------ARR11(3)       --------->ICU4     <---------AHL20(2)     --------->AHL20(1)      --------->AHL20(1)      xxxxxxxxxxxxxxxx>smallRNA(s)     --------->ATHB51      --------->YAB1           <---------AHL20(1)   <------ZmHOX2a(2) --------->LBD16 ----ATHB12             <---------AHL20(2)          --------->ARR11(3)   <---------ATHB12<---------LBD16   aatagaataatttgttttagtaatattaaaaataataaaaatcatatttttgaatatttttgttggtcaataccgatcaatgatggtcaacaccgggttt  1567900                                                                                                -----                                                                                                -----                                                                                                <----                                                                                            <--------                                                                                          <------MYB46(1)                                                                                          <------MYB83                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                  --------->AHL20(2)                               ----------->HVH21 <---------YAB1             --------->LBD16                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)             ----------->GT1                                --------->ARR14(2)     --------->YAB1            ----------->GT1               --------->ANAC46  <---------ARR14(2)    <---------YAB1<----           <---------LBD16        --------->WRKY38(1)    <---------ANAC46    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          --------->MYB52(1)   --------->ICU4  <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   cgacaattgatataccggaaaaaaatgtttgtgatgttgactacatgtcatcatatagttcgtatatgtgtgaccatgtattctattatagttggtgtag  1568000      <---------AHL20(2) ---->ZAT2                       ------>MYB46(1) ---->At4g35610                  ------>MYB83 -----At4g35610       --------->ANAC46                                    <----------DOF2        ---- -REM1(1)<-----------GT1       --------->TOE1(2)    --------->TOE2(3)  <-----------GT1        <------NtERF2 -----ZAT2        <---------AHL20(2)          --------->CCA1(2)    <---------AHL20(2)        ------>NtERF2   ctgagtatttttttccatatataaacgaaaatacctacaaatacaaggatataacctcgaaacttgcatattatttctttatatgaattagttggcacca  1568100                                                                                           <---------                 --------->YAB1                                                        <---------O2                <---------ATHB12                               ------->TEIL            --------->O2                --------->MYB46(3)                      --------->AHL20(2)           ------>NtERF2           --------->ANAC46--------->AHL20(2)          --------->YAB1               --------->DEAR3(1)        <---------ZAT18 --------->YAB1   ----------->GT1<---------AHL20(2)   ------>ZmHOX2a(2)   --------->ZAT14 <---------YAB1      ---------->DOF2 --------->AHL20(2)  --------->ARR11(3) ----->AtLEC2 --------->WOX13(1)--------->AHL20(2)  --------->WOX13(1)     <---------ARR11(3)    ----   tgcagtattgtcccctcaatcaccattgataatataaaatacaaagaaaaaaatcaattaaaatgaatttataagttgatctttcgacgacgtctttaaa  1568200                              --------->AHL20(2)                ----------->GT1               --------->ANAC58       --------->AHL20(2)     <---------AHL20(2)       <---------AHL20(2)     ----------->TBP      --------->AHL20(2)    ----------->TBP   --------->WOX13(1)   <---------TOE2(3)              ----------->GT1                             -- ------------>CBF       <---------ANAC55(2)       --------->YAB1                               <----- -DOF2--------->YAB1  --------->AHL20(2)       --------->RAP2.3(3)               *TSS      <--------- ----->AHL20(2)--------->ANAC58            <------ZmHOX2a(1)           ---------->DOF2  <-----------GT1   aaaatcaattaaaatgcaaggaaattaagtatatatataccaagaggagccctcataagataaaaactcaaactaaagttcggctatgtttttctttctt  1568300                              ---------->DOF2                          --------->ARR14(2)                          --------->GLK1(2)      ------>MYB83       <---------YAB1                          <---------ARR14(2)     ------>MYB46(1)  --------->YAB1     <---------YAB1                         <---------ARR14(1)    <---------MYB59    <---------ICU4   <-----------GT1 --------->GT1         <---------MYB59   --------->YAB1<---------CCA1(2)       --------->AHL20(2) -----DOF2    --------->ARR11(3)         --------->TOE2(3)     --------->YAB1 <---------YAB1 -DOF2        <---------ARR11(3)         --------->TOE1(3) <----------DOF2------>ZmHOX2a(1)   ttggtgaaaaacaaaatgtcttctaccgaatccaaagtagaaaccataacccaactcatgtcttttcatcatcatcctctattatttacgaatgcctctt  1568400                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                       <---------YAB1          <-----                                                                   <---------ANAC58            <-----                                           <------MYB46(1)         <---------ANAC58            ------                                        <---------ANAC58      --------->ALFIN1                <------                                        <---------ANAC58      <-----------RAV1(1)            --------                                  <---------YAB1            <---------ANAC58            <---------ANAC46  --------->ATHB12         ---------->DOF2 <------MYB83     <---------ANAC58            <---------ANAC58  <---------ICU4      XXXXXXXXXXXXXXXXXXX>MIR156G           <---------ANAC46            <---------ANAC58   ctattcattgcattttgtgcgaaacagaagaaagtgaagatagcttggtctgccaatgcattgagtgtggcttctcattgcatatagaatgcgtagagat  1568500          <---------ANAC46          <---------ANAC55(1)   ------>ZmHOX2a(2)    <---------ARR11(3)         <------ZmHOX2a(2) -->ZmHOX2a(2)                --------->AGP1 --ZmHOX2a(2)                 <---------ARR11(3) --->ARR11(3)                 <---------ARR14(3) --->ARR14(2)        <---------DAG2                                                      <----------DOF2 ----ARR14(2)        <----------DOF2 <---------YAB1                                  <---------O2 --->AGP1 <---------ANAC58    --------->ARR14(3)           <---------YAB1            --------->O2 ----ARR11(3)--------->ZAT14  <-----------ARR10            --------->ICU4          ------>NtERF2 ----ARR14(3)<---------ZAT18  <---------ARR14(2)        <---------YAB1     ------>ZmHOX2a(2) --->ARR14(3)<---------ZAT14  --------->ARR11(3)  <---------YAB1         <---------ARR11(3) ---GLK1(1)--------->LBD16    --------->ARR14(2)--------->YAB1           --------->ARR11(3) --->ARR10<---------ANAC58  ----------->ARR10<---------GLK1(1) ----------->GT1    --------->DEAR3(1)<   cttcgagctcttccgtgcagtcactttcccaagatcttcatcaatggaaatcacgattgtcatttttgtaaaattgatctttcgacgacgtctttgtatg  1568600                                                      <---------ALFIN1           --------->ANAC58                           --------->AtMYB61           --------->ANAC58                          --------->MYB46(3)         --------->CCA1(2)                         --------->AtMYB61        <---------ARR14(2)   ------>ZmHOX2a(2)    --------->MYB46(3)        --------->ARR14(2) <---------AGP1        -------->P                   ----------->RAV1(1)      --------->ANAC46     ------->TEIL ----------->GT1            <---------ANAC58      --------->ANAC58     --------->ARR14(2)--------->ARR14(2)    <---------ANAC58      --------->ANAC58     --------->ARR11(3)------->TEIL<---------ATHB12---------->DOF2 -------GAMYB              <---------ARR14(2)<---------ARR14(2)  <-----------GT1      --------->YAB1   ctcgttgcacgatatgcaatgtaaacatggatctagactgtatggtgaatctaccaccactcactattttcgagccaaagcaccataagcatagcttcaa  1568700                                              <------MYB83                                   <-------MYC3                                   <-------MYC2             ------>ZmHOX2a(1)                       <---------ANAC46       --------->At4g35610                       <---------ANAC58       <------MYB46(1)                                 -------                   <----------DOF2 ------->MYC2           <---------ICU4                   --------->ANAC58                  <---------DAG2   ------->MYC3 ----------->HVH21          ------->TEIL    --------->ANAC58       <---------ANAC46<---------ANAC58<---------ANAC46  --------->ICU4 <---------YAB1    <---------ZAT18       <---------ANAC55(1)       ------->TEIL <---------At4g35610 ------->TEIL            --------->ZAT18   cctcttgttacgagtagtcacctttacttgtaatgcatgtggattggaaggtgaccgtaatccttatgtatgttatgaatgccatctcatggtacacaaa  1568800  Previous    Next  AGI:  At2g04500.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54050.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G14980.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, ZZ-type; (InterPro:IPR000433); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 1568281    to: 1570268    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version