Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <-----------GT1                         <---------AHL20(2)                       <---------AHL20(2)                     <---------AHL20(2)                    <---------AHL20(1)                    --------->AHL20(1)                 <------MYB46(1)            <-------TEIL                   <---------AHL20(2)                  ----------->GT1       --------->AHL20(2)                 <---------AHL20(2)                --------->ATHB12   --------->ZAT14               <               --------->AHL20(2)          --------->MYB52(1)     <---------------AtSPL8            - <----------DOF2 --------->AHL20(2)   <---------ZAT14  <------MYB83   <---------ZAT14             >>> -AHL20(2)     <---------AHL20(2)     --------->ZAT14<---------WOX13(1) ----------->GT1   >>>>>>>>>WRKY18   tttctttggtctgatatatatatatattttttttaaaccctacagtaacgaattgattggtatattttagagtacagaaaaaaatacatttttgacagaa  1542900                                                                                                  ---  ------>MYB83                                                                                  <----  ------>MYB46(1)               ----------->GT1      <------MYB83                             <------ ---------MYB59                 --------->LBD16      <------MYB46(1)                   <---------ARR11(3) -------->AtMYB61             <---------LBD16       --------->MYB59               --------->MYB46(3) >>>>>>MYB2            --------->ATHB12      <-----------------AGL3              >>>>>>>>>>>>>>>>>LFY   aaccaaaccagtggaaaactaaacctgattagaccggaaaatttcggtcttaatttggttcttaaacagtcttagcaaaatcgaaccaatgtcttcaaga  1543000                                                                                          <---------O2                                                                                          <---------TGA1a                                                                                          --------->TGA1a                                                                                          --------->O2                                                                                          --------->ANAC55(2)                              --------->KAN4(2)                                           --------->ANAC58                             <---------ICU4                                               --------->ANAC46                             --------->HSFB2a(1)                                          --------->ANAC58                            <---------ATHB12                                   <---------ZAT2                            <------ZmHOX2a(2)                                  --------->HSFC1(2)                  --------->ANAC58<---------ANAC58                             <---------HSFC1(2) -------->GT1     --------->ANAC58--------->TOE2(3)            ----------->RAV1(1)    <-----------HVH21 -----GLK1(2)     --------->ANAC46<---------ANAC58            --------->ANAC46 --------->HSFB2a(1) ---YAB1      <----------DOF2<---------KAN4(1)            --------->CCA1(2)    --------->ZAT2   ttgtgaaaatgctgtgctatacgacattcgatcattccttgatagagcctctactatatgatatacaacattggatgtccaagcttcccttcacgtctct  1543100                                                                                    <---------AHL20(2)                                          --------->YAB1                   --------------->AtSPL8                                          ----------->GT1            <---------TOE2(3) <---------ATHB12             <---------ANAC58        <---------AHL20(1)         <XXXXXXXXXXXXXXXXXXXXMIR849      <---             <---------ANAC58        <---------AHL20(2)        --------->ZAT14     --------->AHL20(2)       >>>>>>>ZML2                   --------->AHL20(1)        <---------ZAT14   --------->TOE2(3)       --------->HSFB2a(2)           --------->AHL20(2)        --------->ZAT18 <-------TEIL     <----       <---------HSFC1(1)      --------->TOE2(3)          --------->REM1(1)<---------------AtSPL8----       <---------HSFB2a(2) <---------MYB52(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ICU4   agacttgttctagaggcgagtctatttccgataacttaataaaatggtaattcaaagactacaactacactaatgttttggtacattaaatcatttcttc  1543200                                                                                         <---------GLK1(2)             <-------TEIL                                                                <-----------    ----------->GT1                                                                    <---------YAB1   <---------TOE2(3)                                                            <---------ARR11(3) ------------AGL15                                                         --------->MYB46(3) -------------AGL1                                          <----------DOF2------------>CBF---------- ----------->AGL15  >>>>>>>>>WRKY18XXXXXXXXXXXXXXXXXXXX>MIR4240           >>>>>>>>>>>>>>>>>LFY   atattatggaaaaaatacattttgacagaaaaccagactagaccgaaaacatttcggtttgactttagcaaaatcgaaccaatgtcttcaagattgtgaa  1543300                                                                        ----------->HVH21                                                                        --------->WRKY12                                                                        --------->WRKY38(1)                 *TSS                                                  <---------MYB52(1)   --------->ANAC46                                                   <---------At4g35610   --------->ANAC58        <---------MYB46(3)                         <-------GAMYB   --------->ANAC58------->TEIL  ---------->DOF2                     <---------ANAC58 -CBF  --------->ANAC58   <---------TOE1(2)                          <---------ANAC58 ->GT1 --------->ANAC58 <----------DOF2                              <---------ANAC46   aatgcaagcaagacccaaatgtgcctctttggttccaaagtcgctctgtaacttaagagagagtgactgttccgttgacagagcaaaatggcccaaacct  1543400                         <---------GLK1(2)<---------ANAC58                <---------MYB52(1)        <---------ANAC58                        <----------DOF2               --------->TOE2(3)<---------At4g35610<----------DOF2    ---------->DOF2   attgaaaaccccaaaacccttagtttggaatctcatctcattttgcttctgttcttttccatgtaatttcaacaaagtttgaaactttgtttctatagca  1543500                    ---------->DOF2                                                         <--------                --------->TOE2(3)                                                          <---------ATHB12              --------->ICU4                                                               --------->ICU4              --------->GLK1(2)         <------NtERF2                         --------->TOE1(3)    --------->AHL20(2)         <----------DOF2  --------->At4g35610          ----------->RAV1(2)   actcaattacatggaaattcttaaaagtctactctttaagtcgccctcttggctgaaactcttagcttcttgttataaaacctgaagttcgaaatcattc  1543600                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                        <---------MYB46(3)                                                                                        <------MYB83                                                                                        <------MYB46(1)                                                                                       <---------AtMYB61  <----------ID1  <----------DOF2     ------>ZmHOX2a(1)                               <---------WOX13(1) -ICU4    <-----------GT1 <---------TOE2(3)                                         --------->ATHB12   caataccacaaataactcaactttcttcaaggtatgtctcctcttactcacatttgattttgggaacttgggttttcttagaatatggattggttctttt  1543700                                                      -------->HAHB4                                                      <---------ICU4                                -                 <------ZmHOX2a(2)                   --------->ICU4                                 -            --------->YAB1                           <---------YAB1                                 <  <---------AtLEC2   <------ZmHOX2a(1)               <---------ATHB51                              <-  <---------ANAC46<-----------RAV1(2)          --------->LBD16              ----------->HVH21    <--- ------->AGL15  <---------ARR11(3)            <---------HSFB2a(2)  <---------TOE2(3)       <---------YAB1 ---DOF2   <---------ATHB12 <----------DOF2   --------->HSFB2a(2)  <---------TOE1(3)     --------->YAB1 --------AGL15  --------->ARR11(3)         <---------ARR14(2)      --------->DAG2       <---------ATHB12 ---------AGL3  <---------ARR14(2)         --------->ARR14(2) --------->ALFIN1      --------->MYB46(3)   tgtagcatggacaatgaagatcaggagtcccttttacttcaaggggttccagataattatggaggtgttaaggtgaacttgacagaaccaatgactattg  1543800  Previous    Next  AGI:  At2g04450.1    Description:  ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6); ADP-ribose diphosphatase/ NAD binding / hydrolase. Identical to Nudix hydrolase 6 (NUDT6) [Arabidopsis Thaliana] (GB:Q9SJC4); similar to AtNUDT7 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 7), hydrolase/ nucleoside-diphosphatase [Arabidopsis thaliana] (TAIR:AT4G12720.1); similar to AtNUDT7 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 7), hydrolase [Arabidopsis thaliana] (TAIR:AT4G12720.3); similar to AtNUDT7 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 7), hydrolase [Arabidopsis thaliana] (TAIR:AT4G12720.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN77063.1); contain Range:  from: 1543317    to: 1545459    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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