Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------O2                                                  =============================bZIP_DOF                                                  --------->O2                                                  --------->ANAC46 --------->YAB1                                                <-----------GT1 --------->WOX13(1)                                         ===================bZIP_DOF  <---------ALFIN1                    <----------DOF2          <---------AHL20(2) ->MYB46(1)                           ======================bZIP_DOF ---->ANAC58                        <---------At4g35610<---------ANAC46              <---------ANAC46 ->MYB83                        --------->ARR14(2)--------->TGA1a  --------->AHL20(2)<---------ANAC58 ---->ANAC58             ---------->DOF2 <----------DOF2 <---------ANAC46--------->ZAT18 ---->ANAC46             ===================================bZIP_DOF---------->DOF2  <---------ANAC58 >HVH21       ----------->HVH21 <---------ARR14(2)--------->ANAC55(2)<---------TOE2(3)   gcctccacctctctctctgactagtcggaaagtgtttctgcttctttgtttcacgtcttgtgtattcaattaaagttcaccagtcttgtgtgtccaaaga  1541100                                                                               <----------DOF2                                                                          --------->SPL7                                                                         --------->MYB52(1)                                                                        <---------SPL7             --------->YAB1                                            <---------ANAC58             <           <---------MYB52(1)                          >>>>>>>>>TBF1   <---------ANAC58            <-           --------->ICU4                --------->AHL20(1)        <---------ANAC46         <--------    <---------ANAC58 <---------At5g28300 <---------AHL20(2)        <---------ANAC58   ---------->DOF2    <---------ANAC58<-----------GT1      --------->AHL20(2)        <---------ANAC58   <xxxxxxxxxxxxxx   ctggagacttgccattagtaattcaccatggtttccttctaaataaaatgtactgaagaagaaacatttgcttgcgaacggcttttgagaaaggctttgt  1541200        <---------AHL20(2)        --------->AHL20(2)  <--------P                                                                             <---------At4g35610  <---------WOX13(1)                                                                     --------->At4g35610 <-------GAMYB                              <---------YAB1                               --------->ZAT2 ---------MYB46(3)                       ----------->TGA1                                <---------ZAT2 --------AtMYB61                       --------->YAB1                             <----------DOF2 --DOF2--------->AHL20(2)              <---------ICU4   <----------DOF2           <---------DAG2 xxxxxxxxxsmallRNA(si3)         ----------->HVH21   <-----------GT1       --------->KAN4(2)<---------   tttggttgatttaattctgttttagttctctctagtgacatttatgacgatttttttcctttgatacttcatagtttattctcactttctcagctgtatt  1541300                                        ---------->DOF2                                       <---------------AGL15                               --------->ANAC55(2)                                       --------------->AGL15                              <---------TOE2(3)           --------->GLK1(1) <---------MYB46(3)                                          <-----------GT1    ---------->DOF2       --------->ATHB12  ---------->DOF2                        <----------DOF2 -DOF2     <---------GLK1(1)<---------WOX13(1)                <---------TOE2(3)<----------DOF2    <--   gaagactaaagagaaatctctaaaccattgattgttgtttactaaagaaagaagaaaatggtttatggaaaactatctagactttctttgtttacgtttt  1541400                            <---------ARR11(3)                      <---------ANAC58                          --------->ANAC58                    <---------ANAC58                          --------->ANAC46                <<<<<<<<<MYB2                          --------->ANAC58              <------MYB46(1)                  ------------>CBF                      <------MYB83<---------ANAC58                 --------->TOE2(3)                  <---------ARR14(2)    <----------DOF2               <---------ARR11(3)                   --------->ARR14(2)  ---------->ID1  ---------->DOF2               --------->ARR11(3)--------->YAB1    <------------------------ANAC81  <---------YAB1 --------DOF2 <---------GLK1(2) <-------TEIL  <----------DOF2 <---------ANAC58    ----------->GT1   ctttgtgagactctcaaaatctcaatccaagaaattcatagttgttctctttgggatttggttttcttgttcttgtcttttaagttgtgataaagagagt  1541500                                                --------->ATHB12            --------->REM1(2)                                       ------>ZmHOX2a(2)                   --------->ALFIN1                                      <------ZmHOX2a(2)                  <---------ANAC46                                      <---------GLK1(1)                  <---------ANAC58                                      --------->GLK1(1)                  <---------ANAC58           --------->ZAT14           --------->ARR11(3)              <---------RAP2.6(2)           <---------ZAT14           --------->ARR14(2)             <-------TEIL        *TSS                         <---------ARR11(3)            --------->CCA1(2)      <---------GLK1(2)              <---------AGP1                --------->ARR14(1)      --------->ARR11(3)             <---------ARR14(2)           --------->ARR11(1)    ----------->ARR10           --------->MYB52(1)                --------->ARR14(2)  ------>ZmHOX2a(1)             ----------->RAV1(1)    ---------->DOF2  <---------DEAR3(1) --------->TOE2(3)       --------->ZAT14      --------->ANAC55(2) <---------ARR14(2) --------->TOE1(3)       ---------->DOF2  <----------DOF2       ----------->ARR10   tttccttagatactgcagcatggacagtgaagcacaacagatctctttacttattggaaaagaagatagatacggccgtgttgaagtaaacctgatggaa  1541600                                                                              <---------AHL20(2)                                                                 ----------->GT1                                                               <-----------RAV1(2)                                                              =============================HOX2a_HOX2a                             ---------->DOF2                  <------ZmHOX2a(2)<-----------GT1                   --------->ARR11(3)                       <------ZmHOX2a(1)--------->AHL20(2)            --------->At4g35610                  <---------TOE1(3)         <---------ARR11(3)          ------->TEIL<---------AHL20(2)         <---------TOE2(3)         --------->ARR11(3)        XXXXXXXXXXXXXXXXXXXX>MIR419   <---------ANAC58--------->ANAC58  <---------TOE2(3)        <---       <---------ATHB12   --------->AtLEC2----------------->AGL3 <---------ANAC55(2)       <---------HSFB2a(1)       <---------YAB1 --------->AHL20(2)  <-----------------AGL1 --------->ANAC55(2)------>ZmHOX2a(1)  ------->TEIL     <---------ARR11(3) <---------ANAC58--------->ANAC58 ---------->DOF2     --------->HSFB2a(1)   gttgaacccatgaatgctgaagattttaatgcaaagcttgacgtttcatttaaggcatggaaggatcaggtattaaagatttaatcctttgcaatgttcc  1541700                                                                 <---------LBD16                                                                 --------->LBD16                                                                --------->HSFB2a(2)                                                                <-----------RAV1(2)                 <                                                   <---------ZAT18--------->LBD16              <-----                                        <---------WOX13(1) ------->TEIL  ---------->DOF2       <-----                                <-----------HVH21  --------->ETT(2) ----------->GT1            <-----                               <---------ZAT6   <---------ANAC46<---------HSFB2a(2)     --------->DAG2 -------DOF2             --------->GLK1(2)   <----------DOF2    <---------LBD16        ---------->DOF2   tttgatatggttttctttgaacatgagtttctagtgtcagtgaatgacttttgtggacatggacttccaggggaaaaaaggaatttggataaagcttcct  1541800       <---------ANAC58       <---------ANAC58    <----------DOF2  <---------At4g35610                        --------->ARR11(3)  --------->At4g35610                --------->ICU4            <------MYB83                      <--- ---------ZAT18                 ----------->GT1               --------->MYB111(1)   <---------GLK1(2) ----ANAC58                    <---------TOE2(3)              --------->MYB59    <---------WOX13(1) ----ANAC46                    <---------TOE1(3)   <---------YAB1<--------P    --------->ATHB12------ ----ANAC58                 <---------ATHB12 <---------ARR11(3)<------MYB46(1)<---------YAB1   <-----   tgtgagctttcgagtcttgttgacattgcaatgaaggtaattaagaagatgttatgtttgtgatttggtagttttgttttttgattgattcttgttcagc  1541900                                                             ------>NtERF2                                                             --------->LBD16                 ========                                                         --------->AtLEC2                    ------>ZmHOX2a(2)                                                   --------->MYB46(3)                       <--------                                                  --------->SPL7                           <---------AGP1                                                  ------->TEIL                             <---------ARR11(3)                                               --------->ANAC46                            --------->ARR14(2)                                               --------->ANAC55(2)             <---------ANAC58         --------->ARR14(2)                    <---------ANAC55(2)             <---------ANAC58         <---------ARR14(2)                    <---------ANAC58               <---------MYB46(3) ----      ------>ZmHOX2a(2)                       <---------------AtSPL3       <---------ANAC58<---------ARR14(2)  <---------ZAT6                              --------------->AtSPL8       <---------ANAC58--------->ARR11(3) -------DOF2  <---------GLK1(2)               --------------->AtSPL3      <---------DEAR3(1)--------- --->At4g35610--------->ARR14(2)     ---------->DOF2   <---------ALFIN1  <---------LBD16  <---------CCA1(2) ----At4g35610<---------ARR14(2)<-----------GT1<---------ANAC58      ------->TEIL   --------->ARR11(3)   tttagtgatcgaatcggattctattttggtgattttacagaaagggtttacgtaccaccatgccgagaatgaatatgcggtgcttagttcttggatctcc  1542000  Previous    Next  AGI:  At2g04430.1    Description:  ATNUDT5 (Arabidopsis thaliana Nudix hydrolase homolog 5); hydrolase. Identical to Nudix hydrolase 5 (NUDT5) [Arabidopsis Thaliana] (GB:Q9SJC6;GB:Q6NNG2); similar to ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6), ADP-ribose diphosphatase/ NAD binding / hydrolase [Arabidopsis thaliana] (TAIR:AT2G04450.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70796.1); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG (InterPro:IPR003293); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 1538898    to: 1541091    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g04440.1    Description:  NUDIX/mutT hydrolase family protein. similar to ATNUDT5 (Arabidopsis thaliana Nudix hydrolase homolog 5), hydrolase [Arabidopsis thaliana] (TAIR:AT2G04430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41151.1); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG (InterPro:IPR003293); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 1541508    to: 1542726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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