Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   ------>NtERF2                                                               <---------ANAC58                                                               <---------ANAC58           <-----------GT1                                    --------->At4g35610        --------->ARR14(2)                                <-----------RAV1(1)        <---------ARR14(2)                             --------->ATHB12 ------ATHB12                                --------->ZAT14  <---------ZAT2 ---->ANAC58                                 <---------ZAT14  <---------At4g35610    <---------YAB1 ---->ANAC58                              ------>ZmHOX2a(1)   --------->ZAT2     <---------TOE2(3) --->WOX13(1)--------->ANAC46  <-----------GT1        <---------YAB1  --------->REM1(1)   tcaattggagtattcacatcacattccaacttgttaccctcttcctctgtagtagtctcattggtgctggcttcaacatcgtttatgttgataaactctg  1481700                                                                     <---------ANAC46                                                                     <---------ANAC58                                                                 <---------ZAT14                                                                 --------->ZAT14                                                           ====================================HOX2a_HOX2a                                                          =====================================HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         <-----------ARR10                                                         --------->ARR14(2)                                                         <---------AGP1               <---------ANAC58                         <---------ARR14(1)               <---------ANAC58                      <---------At4g35610         <------MYB83                              <---------WRKY38(1)         <------MYB46(1)                  --------->MYB46(3)    --------->ALFIN1         ---------->DOF2         <---------MYB46(3)             <-----------GT1 <---------CCA1(2)     --------->ALFIN1  <----        --------->MYB59         <---------LBD16  <-----------HVH21   <---------ANAC58   <------ZmHOX2a(1)        <---------AtMYB61<---------ARR11(3)   ------->GAMYB------>ZmHOX2a(2)<---------ANAC46  -------      <---------MYB52(1) --------->ARR11(3)--------->MYB52(1)   <---------REM1(1)   --------->ALFIN1   caaatgcggtttggttagcgagcatgaaatcttcaccggttttaacaacggagtcatcggatctaagtgtagcgtttgatgtggaagtgaggaaagttgt  1481800                         <------ZmHOX2a(2)                        --------->ARR14(3)                        <-----------ARR10         --------->ICU4                        <---------ARR14(3)        <---------ATHB51                        --------->ARR14(2)    <------NtERF2                        --------->GLK1(2)    --------->LBD16                                        -                        <---------ARR14(2)   <---------RAP2.3(1)                                    <                        --------->ARR11(3)  <---------DEAR3(1)                                      -                       <------ZmHOX2a(1)    <---------RRTF1(2)                                      -             --------->ALFIN1               <---------RAP2.3(2)                                     <       <---------At4g35610                  <---------ANAC46                                        <       --------->At4g35610------>ZmHOX2a(2) <---------RAP2.6(2)                                     <     <-----------RAV1(2)<---------ARR11(3) <---------LBD16                                          -   <-----------HVH21  ----------->ARR10--------->MYB52(2)               --------->LBD16           <-- -----YAB1 <---------ANAC46          <---------MYB52(1)    <---------YAB1              <---------At4g35610 ---->GT1 <---------MYB46(3)      <-------TEIL------>NtERF2--------->ICU4              --------->At4g35610   gattttgtcagatgggtggaagagaggatcttctggttcgtaagttgcggcgattatggtgaagattagtactccgaagacgaagagtgagaagcctatg  1481900                                                  ======================HOX2a_HOX2a                                                  =======================HOX2a_HOX2a                                            <---------HSFB2a(1)                                           <---------ARR14(2)                <---------ANAC58           --------->ARR14(2)                <---------ANAC58       --------->ANAC58          <--------P                   --------->ANAC55(2)       <---------TOE1(3)               --------->ANAC46           ------>ZmHOX2a(2)       <---------TOE2(3)               --------->ANAC58          <------ZmHOX2a(2)             ------ --------------->AGL15                 --------->ANAC55(1)       --------->RAP2.6(3)         ------>ZmHOX2a(2) <---------------AGL15                <---------LBD16    ------->TEIL                       <------ZmHOX2a(2) ---------------->AGL3              <---------ZAT14   --------->ANAC58                     ------->TEIL -----------------AGL1              <---------REM1(2) --------->ANAC58                     <---------AGP1 ---------------->AGL1              --------->ZAT14   --------->ANAC46                     <---------ARR14(2) ---------------->AGL2        --------->GLK1(2)   ------>ZmHOX2a(1)        ----------------------->TaNAC69(2) -----------------AGL3       <---------ARR14(2)=========================HOX2a_HOX2a        --------->ARR11(3) -----------------AGL2       <---------GLK1(2) ------>ZmHOX2a(1)<---------ARR14(2)         --------->GLK1(2) -----------------AG         --------->ARR14(2)==========================HOX2a_HOX2a    --------->ANAC46 ---------------->AG    -------->ZAP1<---------AtLEC2--------->LBD16     <---------ATHB12  --------->ARR14(2) ---------GT1  <-------TEIL----------->ARR10--------->HSFB2a(1) --------->ARR14(2)     <---------LBD16   ttaccgattaaggtaagtgcgttttgacctagattctctgcacggaatcctcctccacgaatcgcagatcggccaaacattttctattctacggatctgg  1482000                                   ------>MYB83                                   ------>MYB46(1)                                  <---------ALFIN1                                 --------->MYB46(3)                               --------->PCF2                           --------->At4g35610                         ====================================HOX2a_HOX2a                         ------>ZmHOX2a(2)                        <---------At4g35610                        --------->CCA1(2)                      <---------ARR14(2)                        =====================================HOX2a_HOX2a                        <------ZmHOX2a(2)                      ------->TEIL                       <---------ARR11(3)               <---------GLK1(1)                       --------->ARR14(2)              <---------ARR14(2)       <---------AtLEC2                       <---------ARR14(2)              --------->ARR14(2)       <---------ANAC58                       --------->AGP1                 <------ZmHOX2a(1)    <---------ARR14(2)                       <---------AGP1          ----------->RAV1(2)         --------->ARR14(2)                       --------->ARR11(3)    <---------At5g28300  --------->WOX13(1)               <-        --------->YAB1<---------GLK1(1)     <-----------GT1   <---------CCA1(2) <---------ANAC58  <-- --->LBD16    <---------ARR11(3) <---------MYB59<---------LBD16--------->ARR14(2)     *TSS       ----   gaatgaagaatgagaagaccctagagatctgatgacccacctctagttaccctggaggatttgtgtatccatcagtgaatttgcttggcccgagtcgagt  1482100                                  ------------>CBF                                 ----------->RAV1(1)                                ------->GAMYB                                --------->DREB2C(2)                                ----------->HVH21                                --------->At1g77200                                --------->DEAR3(1)                                <---------ETT(1)                                --------->DEAR4(1)                               --------->DEAR3(2)                               --------->MYB46(3)                            --------->MYB46(3)                           --------->CCA1(2)         <---------ANAC58 --------->AGP1                                 --------->ANAC46         <---------ANAC58 --------->ARR11(3)                 ------------>CBF         <---------ANAC46 --------->ARR14(2)               --------->At4g35610     <---------ANAC58     <---------ARR14(2)               <---------At4g35610     <---------ANAC58     <---------ARR11(3)   ----------->GT1    --------->YAB1--------->ANAC55(2) --------WOX13(1)       ----------->ARR10   --------->ARR14(2)    ----------->GT1                  -- ----------CBF     <---------ANAC46         <---------ARR14(2)  <------------CBF<---------ANAC55(2)-- ----->ATHB12 <-------GAMYB<------ZmHOX2a(2)<---------GLK1(2)<---------ZAT18   <-------TEIL        <-   gattgaagcttgagtgagttggagtgaagatccaccgacaatggcagatttgtaattttgcagcgcaattgtaaaacgcgatacatatttttagtttaga  1482200                                                                                       <----------ID1                                                                                   ---------->DOF2                                                             ----------->GT1     <---------YAB1                                                           <---------GLK1(2)  --------->ICU4             <---------AHL20(2)                      <---------YAB1      <---------ANAC55(2)            --------->YAB1                     <---------CCA1(1)         ----------->GT1 <---------YAB1              ---------->DOF2   <---------RVE1(1)         --------->ANAC55(2) ------->ATHB51         ----------->GT1       <---------ARR11(3)         <------MYB83 --------------- ------->AHL20(2)     ------->MYC3            --------->ARR11(3)         <------MYB46(1) --------AHL20(2)     <-------MYC3  ----------->GT1<-----------GT1      --------->MYB59----------->GT1   attatttttggctatattaatgcatatggctaaaagacttgaaaaatagatatttactatagattgtttaatattaggtaactatgaaagagaaaaaaac  1482300                                                                          <---------ARR14(2)                                                                        --------->ANAC46                                                                       <---------------AGL15                                                                       --------------->AGL15                                            <---------ARR11(3)   <---------ICU4                                            --------->ARR11(3)   <---------AHL20(2)     --------->ARR11(3)                                           --------->YAB1       <---------AHL20(2)      <---------ARR11(3)                                          <---------YAB1        --------->AHL20(2)     --------->YAB1                                        --------->YAB1       --------->AHL20(2)   <------MYB83                                <---------AHL20(2)          <---------YAB1--------->ARR14(2)                                --------->AHL20(2)          <---------AHL20(2)    <------MYB46(1)       <---------AHL20(2)   <---------AHL20(2)             <---------AHL20(1)    <---------TOE1(2)      --------->AHL20(2)    --------->AHL20(2)          --------->YAB1<-----------------AGL1 --------->ANAC81          --------->AHL20(2)        --------->YAB1 <-----------GT1   <---------YAB1   taaaaccatttaatattctttctattctatttaatttatcaaatatgatattgtctcataatattatttattacccgatattgtaggtatgatattgttc  1482400                      --------->AtLEC2               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <xxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->TGA2(1)          --------->ANAC46          --------->ANAC58          <---------TGA2(1)          --------->bZIP60(1)          <---------bZIP60(1)          --------->ETT(2)          <---------ETT(2)                     --------->TOE2(3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<---------ICU4          --------->ANAC58                    <--------HAHB4        --------->MYB52(1)                    --------->ATHB12                                    ---        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------YAB1                                    ------       ----------->TGA1             --------->ZAT6    ----------->GT1      <---------TOE2(3) --------       ----------->HVH21       <-----------GT1--------->YAB1          --------->ATHB12      <--------     ----------->RAV1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------YAB1       --------->YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->YAB1          --------->YAB1    <---------------   atcatatacctgacgacactattcatccaaaatttacaacactatttatcattagattgtataaaacatttatgatttatgtagataactatttatgata  1482500                                                                     ------->TEIL                            --------->AHL20(2)                       <---------YAB1           -------    --------->YAB1          <---------AHL20(2)                    <---------YAB1             <-------   <---------YAB1       <---------AHL20(2)                     --------->ICU4              <--------- -------->GT1          --------->AHL20(2)                --------->ATHB51                 <---------AHL20(2) --->CCA1(2)       --------->AHL20(2)                    --------->ATHB12                 --------->AHL20(2) ->YAB1            <---------AHL20(1)                   <---------YAB1                 <xxxxxxxxxxxxx -YAB1             <---------AHL20(2)                   --------->ICU4           xxxxxxxxxxxxxxxxxxxx --AGL3<---------GLK1(2)--------->AHL20(2)             --------->TOE2(3)         <---------YAB1     -   tggttatcatattctttctattttatttaatttatcaaatatgtcattgtcttacaacattattgattatgaatattgtaggcatgatacaatttatcat  1482600  Previous    Next  AGI:  At2g04280.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G12700.1); similar to Os10g0456400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064754.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41132.1) Range:  from: 1480065    to: 1482086    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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