Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->YAB1             --                                                                     <----------DOF2           <-----                              <-----------HVH21                 --------->MYB46(3)           -------- ----->ANAC46          ---------->DOF2               <--------P <------------MYB.PH3(2)     <-------- -MYB111(1)    --------->AHL20(2)       --------->ANAC46    <---------MYB59  <---------YAB1 <--------   cgtcaatacattaccaatataaaaacaaagtctgtcagaaacacactatattctggttagtatctaacaaactttgatgatgttagaaaatcaaatgata  1474300                             <---------ICU4                            <---------YAB1                                       --------->ARR14(2)                            --------->ICU4                                       <---------GLK1(2)                       ----------->GT1                                     ----------->HVH21 ------->ANAC46    --------->ZAT14                                        <-----------HVH21 ----WOX13(1)      <---------REM1(2)            <---------At4g35610      --------->O2          <----- ->ATHB12          <---------ZAT14              --------->At4g35610  ------->TEIL<---------ARR14(2) -YAB1             --------->ZAT18          <-----------HVH21     <---------ATHB12            <------ -ATHB12  ---------->DOF2<---------YAB1    <----------DOF2        <---------MYB52(2)          =======   gactccatattacaaagggactacactgttattatggctattcttctttcagaggcccatactatgcaatgaaccatgtgacatattctcttcattccca  1474400                                                         <----------DOF2                                                        <---------------AGL15                                                        --------------->AGL15                                               --------->ANAC55(1)                                               <---------ANAC55(2)                                               --------->ANAC55(2)                                               --------->ANAC46                                    <---------ANAC58    --------->TOE1(3)                         --------->YAB1        ----------->GT1                        <---------ATHB12       --------->ANAC58                       ------>MYB83 <---------ANAC58    --------->TOE2(3)                       ------>MYB46(1)         --------->ANAC58 ----------AGL15      --------->WOX13(1)    <---------ATHB12 <---------YAB1<---------MYB52(1) -----------AGL3  <-----------GT1  ---------->ID1    <-----------GT1 <-----------GT1 =======================================================================MADS_MADS         -----------   tacatggctacttaaatgttttaccaatcagaaatttgtcgttctaatcacgtaataacctttattagtattcacccgtttttttaaaactccaacattc  1474500                          <---------ANAC58             <---------ANAC46                                          <---------YAB1             <---------ANAC58                                        --------->YAB1             <---------ANAC58                                       <---------ATHB12            ------>NtERF2 <---------ETT(2)                         ------>MYB46(1)         <---------At4g35610                                       ------>MYB83        --------->ANAC46<-----------HVH21                         --------->WOX13(1)<---------ICU4       --------->MYB46(3) <---------ANAC58                    <-----------GT1      <---------YAB1 >RAV1(1)--------->At4g35610          ------->GAMYB    <---------ARR11(3)        --------->YAB1   gcattctcatccgctgcgtttaagtctgtcgagcctataaccccctaaaaatgccataatcttcttaccaatcacaattgatatcatcattttgaacatt  1474600                                                                                                 <---                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              =======                                                                                              <------                                                                                              -------                                                                              =======================                                                                              =======================                                                                              <----------DOF2 -------           --------->ALFIN1            ---------->DOF2             <---------MYB46(3)         <------           <---------MYB52(1)<---------AHL20(2)        <---------MYB59      *TSS              -------          <-------GAMYB--------->TOE1(3)             <-----------ARR10<-----------RAV1(1)    --------  <---------GLK1(2)    --------->TOE2(3)            <---------CCA1(2) <---------MYB46(3) --------->ZAT14   tcaaaattctcccgttgggcttagaccttaattaatgggtctaaagtagaccacatatctaactatgagttgttgttgggctttggaaaactacacacgt  1474700                    <-----------HVH21                   ----------->HVH21                  ------->PIF5                  <-------PIF4                  <-------PIF5                  ------->MYC4                  <-------MYC4                  ------->MYC2                  ------->PIF4                  <-------MYC3                  ------->MYC3                  <-------MYC2                 <---------ANAC55(2)                 --------->ANAC55(2)                 ==============================bZIP_DOF                 <---------TGA1a --------HVH21   --------->TGA1a ---->ALFIN1     ===============================================MYC_MYB --MYC3          <---------O2 ->MYC4          --------->O2 --MYC2    -------->P ->MYC2    ================MYC_MYB                                                 --------->LBD16 ->MYC3<---------ARR11(3)             --------->ANAC58                            --------->HSFB2a(2) --MYC4<-----------ARR10          <------NtERF2                                   --------->LBD16 ---TGA1a  <---------At5g28300   ------>NtERF2                                    --------->ANAC46 ===================MYC_MYB     <----------ID1                                   <---------LBD16 ---ANAC55(2)   ------------>OsbHLH66 --------->ANAC58                           --------->HSFB2a(2) -->TGA1a <-----------GT1     <---------ATERF1(1)          <---------DOF5.7(2)   <---------HSFB2a(2) ===bZIP_DOF--------->ANAC46 --------->ANAC46    <---------YAB1                ------>MYB83 ==========================bZIP_DOF   --------->ANAC46   <---------MYB52(1)    -------->P -->ANAC55(2)  <---------ALFIN1 --------->RAP2.6(2)      --------->DOF5.7(2)   ------>MYB46(1) ---O2 --------->ARR14(2) <---------ZAT14 ------>NtERF2 <-------GAMYB        --------->AtMYB61 -->O2 --------->ARR11(3) --------->ZAT14--------->RAP2.6(2)     <---------CCA1(2)<---------HSFB2a(2) ---->OsbHLH66 <------------OsbHLH66---------->DOF2 ------>ZmHOX2a(1)     <---------ALFIN1    <------   gtgagacaatatctaccgcacgtgtcagtgcaaggcgccaaagccaccattatccttccgttatcgtctatcttctccaccttcccggaatccaattcac  1474800                                   <-----------GT1                    <---------At4g35610                               <---------DAG2                         --------->At4g35610                               <----------DOF2                        --------->ZAT2                          <---------ZAT2                         <-----------GT1                 <---                          --------->ZAT2                ------->TEIL  <---------ZAT2            <----                          <---------At4g35610           <---------ARR11(1)                  <--------                   <---------GLK1(1)                   <---------CCA1(2)                    ---------    ------>ZmHOX2a(1)     --------->At4g35610          <---------GLK1(2)              <----------DOF2 -----GT1          --------->GLK1(1)    --------->REM1(1)    <----------DOF2    <-----------RAV1(1)   caattcctaagcattcttcagaaatccgagctgctttttgccacatctattcgcttcgaatctcttttcaccagctcaaaaactgtcgctttcaattccg  1474900                  --------->LBD16                 <---------ANAC58            <---------ALFIN1         <---------ALFIN1                                                               --------->TOE2(3)        --------->MYB46(3)                                                      <------NtERF2       --------->SPL7                                                           --------->ATERF1(1)    <---------ANAC58                                                          <---------ANAC58      <    <---------ANAC58--------->REM1(2)                                         --------->bZIP60(1) <-- ------MYB52(1)  <---------ANAC46                                             <---------ANAC46  <---- -----At4g35610  <---------ANAC58                                             <---------bZIP60(1) <-- -ARR14(2)  --------->DEAR3(1)                                                <---------ANAC58 <----- >ARR14(2) --------->MYB46(3)                             ------->TEIL   <---------AtLEC2------>ZmHOX2a(1)   ctcgtttcgtcccaccgctccgtgtattgctgaacttcttcatagcaactcaataccatggatgttactgaagttccatggcgtcgtcttcctcaatttt  1475000               <---------TGA1a               --------->TGA1a               <---------O2            <------NtERF2          --------->ANAC58          --------->ANAC46        --------->ANAC58        --------->ANAC46        --------->ANAC58                           <---------TOE1(2)     <---------REM1(2)                            <---------MYB52(1) --------->ARR14(2) <---------ANAC58    <---------At4g35610 <---------ARR14(2) <---------ANAC46<---------ARR14(2) ---------MYB52(1)  <---------ANAC58--------->ARR14(2)      --------->ATHB12--------->YAB1 -------ANAC58 --------->O2        --------->GLK1(1)  --------->ARR11(3)   <---------YAB1 -------GT1------>NtERF2<---------CCA1(2) <----------DOF2<----------DOF2 <-----------GT1 <-----------RAV1(1) -------ANAC58 ======================================bZIP_DOF    <---------TOE2(3) <----------DOF2 <- ------GT1--------->ANAC58         <---------GLK1(1)  <---------ARR11(3)<---------AHL20(2)      -----   ccgtttcttcacgcgcctcgtggctcgtttcttctgggtttccgctttcttcgtaagttctttcattgaggcattttatcatacactttgtctgtgggat  1475100                                                        <---------TOE1(2)            <---------CCA1(2)                           <---------TOE2(2)         <------------------------ANAC81                <---------TOE2(3)      ------>ZmHOX2a(1)                         <------MYB83                                     <--- --------YAB1                   ------->TEIL    <------MYB46(1)                                  <--- ---->GLK1(2)      <----------DOF2            --------->ALFIN1----------->HVH21                  <---   tctaattcctgttcttatcttctttcgatttttgaatctattgtggaagtgggtttcttaggttctgaacgggattgaaacatttgtttgtactcagttt  1475200  Previous    Next  AGI:  At2g04270.1    Description:  glycoside hydrolase starch-binding domain-containing protein. similar to hypothetical protein OsJ_025791 [Oryza sativa (japonica cultivar-group)] (GB:EAZ42308.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41131.1); similar to hypothetical protein OsI_027764 [Oryza sativa (indica cultivar-group)] (GB:EAZ06532.1); contains InterPro domain Ribonuclease E and G; (InterPro:IPR004659); contains InterPro domain Carbohydrate-binding-like fold; (InterPro:IPR013784); contains InterPro domain Glycoside hydrolase, carbohydrate-binding; (InterPro:IPR002044); contains InterPro domain Immunoglobulin-like fold (InterPro:IPR013783); contains Range:  from: 1474676    to: 1480106    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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