Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ICU4                                      <---------ZAT14                                      --------->ZAT14                                   <---------ANAC46                 ----------->GT1 <---------ANAC46                 <---------ANAC46<---------ANAC58             <---------ATHB12               <---------ANAC46  <---------ANAC58       <-----------GT1                           ---   cttaagtgtttgttttgatgtgtgaattagatgtgtcttgtgtagtaatagttgtttttatctaatcacttagatgtgtattgtgttttgatgtctgaat  1435700                     <---------YAB1                     --------->ICU4               <-----------GT1              --------->AHL20(2)<----------DOF2           <---------ICU4 <---------ANAC58           <--------HAHB4 <---------ANAC58                                      --------->At4g35610          --------->ICU4<---------YAB1     <---------ZAT14           --------->ATHB12    --------->YAB1   <-----------RAV1(1) <---------GLK1(2)   --------->ZAT18          --------->ICU4 ------>NtERF2 ------>WOX13(1)   --------->YAB1       <---------ANAC46      <---------TOE2(3) <---------At4g35610   caatcttgttgcataattaactcatgattcttgtctttgattatgtggactgagtaatggttttgatgtattgattagagtccgatgccaaacataactt  1435800                  <---------ANAC46                  <---------ANAC58                  <---------ANAC58      <---------ANAC58                                                                              -      <---------ANAC58                                                                          -----      <---------ANAC46                                                                          ----- --------->ANAC55(2)                                                                           <----- <---------ANAC55(2)                     <---------ANAC58                                      ------ <---------ANAC55(1)                     <---------ANAC58                                    --------   attaagtgtcttgttttgttgagtgaatgtgtctgtgtcttaagcgtgtgtttttgtgtttgaattagatgtgtcttaagtgtcttaagtgtttgctatg  1435900       <-----------RAV1(1)                 <---------MYB46(3) -------->MYB52(2)                      --------->MYB52(2) ---->ATHB12                        --------->ATHB12 ---->YAB1                          --------->YAB1                                              ----- ----YAB1                          --------->ICU4                                    --------->ATHB12 --->ICU4                          <---------YAB1  <---------ANAC46                 --------->ICU4 ------->AGL15                <---------MYB46(3)<---------AtMYB61             <---------TOE2(3) <----   attagttgtctgtggttttgagtcttatgtgtttgttatgattagttgttgtggtttagagtctcatgtgtaatggttttgatgtattgattagagtccg  1436000                                <---------YAB1                      <---------ANAC46                      <---------ANAC58                                                          <----                 <---------ANAC55(2)                                                       --------->O2     --------->ANAC46 <---------ANAC58                                                     <---------TGA1a ---->At4g35610  --------->ANAC55(2)                        <---------TOE1(2)              --------->TGA1a -----At4g35610  <---------ANAC55(1)                        <---------TOE2(2)              <---------O2   atgcaaaacacaacttattaagtgtcttgttttgatgagtgaatgtgtctgtgtcttaatcgtatgtttttgtgtttgaaatagatgtgtctcaagtgtc  1436100                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                        <---------CCA1(2)                                                                    <---------ANAC46                                                               <---------ANAC55(2)            --------->ATHB12                                   <---------ANAC55(1)           <---------YAB1                                      --------->ANAC55(2)           --------           --------->ICU4                             >>>>>>>>>ARR2 <---------ANAC58         <-------      <---------MYB46(3) *TSS                        --------->ATHB12 ----------->GT1       <-------- -----ANAC46--------->YAB1 <---------ANAC46         <---------YAB1  <---------ANAC58<---------TOE1(2)   ttatgtgtttgttatgattagttgatgtggtttagagtctcatgtgtattggttttgattgtattaagtgtcttgtatattgcttgcaggtttactcggg  1436200                                                                                   <---------LBD16                   <------ZmHOX2a(1)                                              ------>ZmHOX2a(1)                 --------->MYB59          ------>MYB46(1)                         <---------LBD16 ->ANAC46      <--------P                 ------>MYB83                    --------->ANAC55(2) --LBD16--------->ANAC58                 ----------->RAV1(1)          <-----------HVH21 -LBD16 --------->ANAC58     ---------->DOF2                      <---------At4g35610         -------   acacaaattcaagcctggttaggaagattactaaagtatggaccaacaaatttgatggtctgttctatagctggtcatgtgttcctcgggatagacgaga  1436300                  ----------->GT1                                <----------DOF2             <-------        --------->HSFB2a(2)                                 <---------At4g35610 --------->ARR11(3) <-    <----------DOF2        <-----------GT1                  --------->At4g35610 <---------ARR11(3) -- ---->GT1       <---------LBD16    ------>ZmHOX2a(1)  <---------TOE2(3)  --------->ZAT6     <--------   aaaatactttctcgagtttgcggtataattttccttcctcttgccttaagagtattaagttaagctgctttgttttcactaacatcttctattttttatt  1436400                      ------>ZmHOX2a(1)                      <----------DOF2                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)        --------->ANAC58        --------->ANAC46           <-------TEIL        --------->ANAC58 --------->YAB1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  <------ZmHOX2a(1) --AHL20(2)       <---------ARR14(2)                                 --------->TOE1(2) --------HSFB2a(2)--------->ARR11(3)    --------->ZAT14    --------->GLK1(2) ------->HSFB2a(2)--------->ARR14(2)    <---------ZAT14   --------->GLK1(1)                  -------- -AHL20(2) --------->ATHB12    <---------------AtSPL8     <---------GLK1(1)  ---------->DOF2 --------   tgtagaaaacacaccattgggatcctttgataacaggtacagttcaatggcattttgaagaaatctgtaaacgaaggatgaaagacatggttagcacgat  1436500                          <------ZmHOX2a(2)            --------->ALFIN1                <---------------AGL15         ---------->DOF2                                      --                --------------->AGL15      --------->HSFB2a(2)                                     <-                ----------------->AGL1     <---------HSFB2a(2)                                     --               ----------------->AGL3     <---------LBD16                                         ---               <-----------------AGL3   --------->ARR11(3)                    --------->ANAC58   ----               <-----------------AGL2   --------->ARR14(2)          --------->ARR14(2)     ----------               ----------------->AGL2   <---------ARR14(2)          <---------ARR14(2)    <------ZmHOX2a(1) ->ANAC58     <---------ZAT18          <---------CCA1(2)      <---------ARR14(2)      <---------ANAC46 ->ANAC58     --------->ZAT18   <---------GLK1(2)    <---------ANAC46         --------->ANAC58   <---   aagtactagtcgagagtgccctaaatggatcatcgattctcatatctggaaagcgatgtgtgagtattgggatactgaagaagcaatagcgaggagtaag  1436600  Previous    Next  AGI:  At2g04210.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G10070.2); similar to unknown [Solanum tuberosum] (GB:ABC01914.1); contains InterPro domain Putative plant transposon protein; (InterPro:IPR004252) Range:  from: 1436125    to: 1437587    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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