Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                    -                                                   <---------ANAC58                                --                                                   --------->ANAC55(2)                         <-----                                                   <---------ANAC46                            ------                                                   <---------ANAC58                            <-----        <-------TEIL                             <---------ANAC46                              ------    <---------------AtSPL3   ---------->DOF2<---------GLK1(2)                 ----------->RAV1(1)----   caactataggtacgtttgagactattgcagagaaagtgtaagttccgattttcgcgtattgttttgctccataagcttggccacatagagtttcaagtgc  1378700        <---------MYB59                            ===================HOX2a_HOX2a --------->LBD16                                   ------>ZmHOX2a(2) -------->ANAC58                                 ------->TEIL -------->ANAC58                                 <---------ARR14(2) -------->ANAC46                                 <---------AGP1 ------->MYB46(3)                                --------->ARR14(2)                                -- ----ZAT14                                       --------->ARR11(3)                                -- --->ZAT18   ----------->GT1             <-------TEIL                 --------->YAB1        --------- ----ZAT18------>MYB83                  --------->GLK1(2)      <------ZmHOX2a(1)        <---------At5g28300 --->ZAT14------>MYB46(1)               --------->CCA1(2)    <---------TOE2(3)         <-----------GT1 --->TEIL --------->MYB52(1)     <----------DOF2 <---------ARR11(3)--------->YAB1   --------->MYB111(1)   acccgctaaaccaaactgcaaaaaaacattcaagactttgagattcgaatggatcttgaaactgaggattaataacaactagttagtagttaccatgaca  1378800                                                                       ------>NtERF2                                                                      ----------->HVH21                                                                      <---------ETT(2)                                                                      --------->DEAR3(1)                                                                    <---------ATERF1(1)                                                                    <---------DEAR4(2)                                                                    ------>NtERF2                                                                   <---------DEAR3(1)                                                                   --------->ATERF1(2)                                                                   <---------ATERF1(2)                                                                  <---------ANAC46                                                                  --------->ATERF1(1)                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                  <---------ORA47(1)                                                                ------>NtERF2                                                                <---------MYB46(3)                                                               --------->ALFIN1                                                               ----------->HVH21                                                           <---------ZAT14                                                           --------->ZAT14                                                           <---------ABI4(1)                                                        <---------At4g35610                                                        --------->At4g35610                                                       --------->MYB52(2)       <---------ARR14(2)                     <---------At4g35610<------NtERF2       --------->ARR14(2)                     --------->ZAT2  --------->ATERF1(1)     --------->LBD16                          --------->At4g35610<---------ATERF1(1)    --------->RAP2.6(2)                       <---------ZAT2<---------DEAR3(1)   <---------LBD16                     ----------->RAV1(2) ------>NtERF2    <---------YAB1        --- -------->DOF2                       --------->ANAC58 --------->ZAT18--------->RAP2.3(1)          <-- ------->ZAT14    ---------->DOF2    --------->ANAC58 <---------ZAT14--------->ATERF1(1)<---------ANAC46 -->HVH21<-------TEIL               >>>>>>>>>MYB2   <---------GLK1(1)<------NtERF2    --------->MYB52(1)   ctgaagccggatacgtttgtaaaagaagtggcaagagcaacgcctgagagctggagttcgctgcggtggccggcgaccatgactgagataacgggtaata  1378900                                                                                          --------->At4g35610                                                                                          <------NtERF2                                                                                         ------>NtERF2                                                                                         <---------DEAR3(2)                                                                                        <---------DEAR3(1)                                                                                       --------->ATERF1(1)                                                                                       <------NtERF2                                                                                      <---------SPL7                                                                                      <---------ATERF1(1)                                               --------->ARR14(2)                     <-----------HVH21                                               --------->ARR11(3)                     ------>NtERF2                                            <---------TOE2(3)                        <---------DEAR3(1)                                         <----------CDC5  --------->DEAR3(1)         --------->DEAR3(1)                                        ----------->RAV1(2)   --------->At5g28300   --------->ATERF1(1)                                        --------->At4g35610------>NtERF2            <------NtERF2                                        <---------ZAT2  <---------ATERF1(1)        <---------ORA47(2)                                        <---------At4g35610--------->LBD16         <---------RAP2.3(1)                               --------->DEAR3(1)     --------->At4g35610         <---------RAP2.3(3)                              --------->ATERF1(1)     <---------At4g35610         <---------DREB2C(2)                              --------->At4g35610     --------->ZAT2              <---------DEAR4(1)                    <------NtERF2     <---------RAP2.6(2) <---------ALFIN1        <---------At1g77200              <---------At5g28300     <---------RAP2.3(2)<---------LBD16          <---------DEAR3(1)           <-----------HVH21  <------NtERF2 <---------TOE1(3) --------->LBD16     --------->ETT(1)          ------->GAMYB       <---------At4g35610     <---------ZAT2             --------->RAP2.6(3)         --------->MYB46(3)  <---------DEAR4(2)--------->GLK1(2)                <-----------HVH21       ----------->RAV1(1)   <---------ATERF1(1)<-------TEIL <---------ANAC46  <-----------RAV1(1) ------>ARR11(3)   ------>NtERF2------>NtERF2  <---------ARR14(2)    <-------TEIL--------->DDF1 -------ARR11(3)  --------->ALFIN1  --------->AtLEC2  <---------GLK1(1)    ------>ZmHOX2a(1)        -   gatattgagcaacagtcacggtggccataggcagcgccatgcggctgaggttcttgagctccgccgtgaaattcatcctccatgtcggcgtcggcttaag  1379000                                                                         <---------WRKY12                                                                         <---------WRKY38(1)                                                                       <-----------HVH21                                                             <----------DOF2                                                            ------>ZmHOX2a(2)                                                            =============================HOX2a_HOX2a                                                           <------ZmHOX2a(2)      <----------DOF2                                      ------>ZmHOX2a(2)    <---------RVE1(1)      ------>ZmHOX2a(1)                                    --------->ARR11(3)     ==============================HOX2a_HOX2a-                                    <---------AGP1        <---------ARR14(2)   <------ZmHOX2a(2)   <-                                    <---------ARR11(3)    --------->ARR11(3)  --------->ARR14(2)   --                                    <---------ARR14(2)    --------->ARR14(2)  --------->ARR11(3)   --                                 --------->ALFIN1         --------->ARR14(3)  <---------ARR14(2)   --                              --------->DAG2              <---------ARR14(3)  <---------ARR11(3)   <-                             ---------->DOF2              <---------ARR11(3) ------->GAMYB        <--             <---------YAB1 --------->YAB1    --------->ARR11(3)    <---------ANAC58    <---------WRKY18(1)    <---------MYB52(1)     <---------ATHB12 <---------MYB52(1)      <---------ANAC58 <---------ANAC58   --------->LBD16      <---------------AGL15 <---------ARR11(3)  --------->ARR11(3) <---------ANAC58 <---------LBD16<---------WOX13(1)  --------->ARR14(2)   --------->GLK1(1)  --------->MYB46(3)    <-- -------->MYB52(1) ---------->ARF1 <---------CCA1(2)     <---------GLK1(1)<---------DOF5.7(2)     <--   acttccggtgattatctgattgtctcccaataaaagtggatcttccattatcttcttggagatctttagttcttgtcaacgatcctttcttgaccttgga  1379100                                                                                  <---------ANAC46                                                                                  ----------->GT1                                                                                  <---------ANAC58                                                                                  <---------ANAC55(1)                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC55(2)                                                                             --------->ALFIN1                                                                             <-----------RAV1(1)                                                                            <-------MYC4                                                                            ------->MYC2                                                                            ------->MYC4                                                                            <-------MYC3                                                                            <-------MYC2                                                                            ------->MYC3                                                                           <---------TGA1a     <---------At4g35610                                                   --------->O2     --------->At4g35610                            --------->YAB1         --------->TGA1a <-----------HVH21                                  --------->AHL20(2)     <---------O2 -------->ALFIN1                                   <---------YAB1          <---------ANAC55(2) ------MYC2                                       --------->AHL20(2)       --------->ANAC55(2)<------ ------->TOE1(2)                                  --------->AHL20(1)       <--------ABF1  <---------AHL20(2) ----->MYC2                *TSS                   <---------AHL20(2)   <-----------HVH21  <---------AHL20(1) ----->MYC3             ---------->DOF2          --------->YAB1       ----------->HVH21   --------->AHL20(1) ------MYC3      --------->ANAC58               <---------YAB1     <---------ARR11(3)    --------->AHL20(2) -------ANAC46   --------->ANAC58             <---------ICU4       --------->GLK1(2)     --------->YAB1 -------ANAC58   --------->ANAC46            <---------YAB1       --------->RVE1(1)--------->LBD16 -- -------ANAC58--------->ZAT18                --------->ICU4<---------HSFB2a(2)    <---------ANAC58 --   acgtgtgagatgagaatgcacgacttcaaagaacagaaaacagagacatcattataatatactagaaaaaatctgacacgtgttgcgtgaattatattca  1379200                                                                        <---------------AGL15                                                                        =============================                                                                        <----------DOF2                                                                  --------->AHL20(1)                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                                 <---------AHL20(2)                                                               <---------AHL20(2)   <------------CBF                                            --------->AHL20(2)  <---------ICU4           <---------ANAC58                  <---------AHL20(2)  --------->ATHB51         <---------AtLEC2                  --------->AHL20(2)       --------->AHL20(1) <---------YAB1   ------------>CBF                       <---------AHL20(2) --------->YAB1 -TEIL   <-----------TBP   <---------ANAC58 <---------YAB1 --------->AHL20(2)         <---------AHL20(1) ------->ANAC55(2)<---------ATHB12       <---------MYB52(1)<---------AHL20(2)  ----------->GT1  ----- ------->YAB1 ------------>CBF----------->GT1            --------->AHL20(2)<---------YAB1       <----   tacataattgtatatatacaatcaattttgcatggttatattcgttattttagttttatatatatatatatattcttttcatagttaatattttttaaaa  1379300                    <---------ICU4                    --------->ATHB51                    <---------AHL20(2)                    --------->ATHB12                    --------->AHL20(2)                   --------->ICU4                --------->AHL20(2)                <---------AHL20(2)                                                    --------->TOE2(3)               <---------AHL20(1)             <---------YAB1                   <---------AHL20(2)         ----------->GT1                  <---------DAG2                  <---------YAB1  --------------->AGL15                   <----------DOF2               <-----------GT1  --------->HSFB2a(2)              <---------YAB1                      --------->ICU4 --------->YAB1  <---------------AGL15       <---------ARR11(3)                     <---------ICU4  ----------->GT1 =================MADS_MADS   --------->ARR11(3)                    <---------YAB1  <---------TOE2(3) ---->ARR11(3) --------->AHL20(2)--------->AHL20(2)                 --------->ICU4 --------->YAB1 -----ARR11(3) <---------AHL20(2)<---------AHL20(2)          <-----------GT1  --------->AHL20(2)    -   tcttctaaaatttgtaatttaattatttgtaagatttatatttgctttattaatagagagtatttacaacataattactattttataatgttaatagctt  1379400                                                                               --------->YAB1                                                                               <--------HAHB4                                                                               --------->ATHB51                                                                               -------->HAHB4                                                                               <---------ICU4                                                                               -------->ATHB1                                                                            <---------ICU4                                                                            --------->YAB1                                                                           --------->ICU4                                                                           <---------YAB1                                          <---------AHL20(1)              <---------AHL20(1)                                          --------->AHL20(1)              --------->AHL20(2)                             --------->AHL20(2)                           <---------AHL20(2)                             <---------AHL20(2)--------->AHL20(2)        --------->YAB1               --------->AHL20(1)         --------->AHL20(2)         --------->AHL20(1)               --------->AHL20(2)         <---------AHL20(2)        --------->YAB1               <---------AHL20(1)        <---------AHL20(2)         --------->AHL20(2)     --------->YAB1               <---------ARR11(3)        --------->AHL20(2)     --------->AHL20(2)  <---------YAB1               --------->ARR11(3)  --------->YAB1               <---------AHL20(2)--------->YAB1             <---------ARR11(3)   <---------YAB1               --------->AHL20(2)<---------YAB1             --------->ARR11(3)  <---------AHL20(2)   ------>ZmHOX2a(1) <---------YAB1  --------->YAB1           <---------TOE2(3)<---------AHL20(2) <---------AHL20(2)--------->YAB1<---------AHL20(2)     <---------TOE2(3)----------->GT1--------->AHL20(2)     --------->AHL20(2)--------->ICU4  --------->AHL20(2) <---------TOE1(3)--------->AHL20(2)    <---------AHL20(2)<---------ATHB51  <---------AHL20(2) <---------TOE2(3)<---------AHL20(2)   <---------AHL20(2) <---------YAB1    <---- -------->YAB1--------->CCA1(2)  --------->AHL20(2)  --------->TOE2(3) --------->AHL20(2)  -------->HAHB4   aaaaataaatgttaagatatattaaggttatttattttaataaataaattttaatcctaaaattatttaataatattataattattatactaataatact  1379500                                                                                  --------->YAB1                                                                                  --------->ANAC46                                                                               ------->GAMYB   <---------AHL20(2)         --------->TOE2(3)    ----------->GT1--------->AHL20(1)  --------->AHL20(2)          --------->TOE1(3)    <----------ID1 --------->ARR11(3)                - <---------YAB1       <-----------GT1            --------->MYB52(1)           --------->MYB46(3)   <- ------DOF2        --------->ARR14(2)      ----------->GT1 --------->AHL20(2) <---------MYB52(2)   <-   tttattatatagttgtatcagtattttcaaacccttaatctaacatcgaaaaaacgaaaaattatacatatattgcatcaacaaacacaactatatggat  1379600  Previous    Next  AGI:  At2g04100.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04090.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04050.1); similar to transporter [Arabidopsis thaliana] (TAIR:AT2G04070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42224.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528); contains InterPro domain MATE family transporter related protein (InterPro:IPR015521) Range:  from: 1376887    to: 1379127    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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