Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              -------->P           --------->MYB52(1)          ------->GAMYB         <---------MYB111(2)         <---------MYB46(2)         <---------MYB55(2)         <---------MYB111(1)         --------->MYB46(3)         <---------MYB52(2)        ------>MYB46(1)        ------>MYB83      --------->MYB46(3)                                     <---------AHL20(2)                     -      <---------MYB111(1)                                 ----------->GT1                           <    ------->TEIL            ---------->DOF2             ---------->DOF2              <------ZmHOX2a(1)  <---------ZAT18       --------->ANAC46      <-----------------AGL1 --------->ARR11(3)           ---   ccaatgcaccaactaacccaaactacacaaaaaagaatgcagcaatatttcaatattggaaagttaattgagttcttgaaatgaagaggagagagtaata  1358900                                                                                        ------>NtERF2                                                                                       ----------->HVH21                                                                                       --------->DEAR3(1)                                                                                       <---------ETT(2)                                                                                      --------->RAP2.3(1)                                                                                      <------NtERF2                                                                                      --------->ATERF1(1)                                                                                     <---------DEAR4(2)                                                      <---------ALFIN1               <---------ATERF1(1)                                                   --------->ANAC46                  ------>NtERF2                                                   ----------->HVH21                <---------ATERF1(2)                                        <---------ANAC58                            <---------DEAR3(1)                                        --------->O2<---------ATERF1(1)             --------->ATERF1(2)                                        <---------O2----------->RAV1(1)            <---------ORA47(1)             <---------At4g35610        --------->TGA1a  --------->DEAR3(1)        --------->ATERF1(1)             --------->At4g35610        <---------TGA1a------>NtERF2            --------->ALFIN1      <---------YAB1     <---------DOF5.7(2)       --------->ANAC58           --------->O2    <-----------GT1     <---------ARR14(2)     --------->ANAC58--------->At4g35610 <---------ANAC46 <--------HAHB4         --------->ARR14(2)     --------->ANAC58<---------ZAT2 <---------TGA1a <---------ICU4        <------NtERF2    <---------ANAC58--------->DEAR3(2)    <---------O2 --------->ATHB51     --------->LBD16  <-----------------------TaNAC69(2)  --------->DEAR3(1)<------- -------->ICU4       --------->RAP2.6(2)<---------bZIP60(2)    --------->ZAT2 <-----------RAV1(1) ---------YAB1      <---------LBD16===============bZIP_DOF     <---------At4g35610 <---------ANAC58 < ------>YAB1<---------YAB1         ---------->DOF2 --------->ANAC58<---------ALFIN1<---------ANAC58 -   gcataattaccattatgctgaagccggaaacgtttgtgaaagacgtggcaagcgcgacaccggcgagctccaactcgccgatgtggccggcgaccatgac  1359000                                                                                    <---------MYB59                                                                                   <---------At4g35610                                                                                   --------->At4g35610                                                                                   <---------bZIP60(2)                                                         --------->At4g35610       ----------->RAV1(2)             --------->YAB1                     --------->RAP2.6(2)                <---------O2             <---------ICU4                    --------->ATERF1(1)              ----------->HVH21            --------->ICU4                     <---------RAP2.6(2)              --------->WRKY38(1)            <---------ATHB12         <------NtERF2       <---------At4g35610   --------->At5g28300       --------->ANAC46             ------>NtERF2------>NtERF2               <---------DEAR3(1)     -       --------->ANAC58            --------->ALFIN1---------->DOF2     --------->ZAT2               <  ----------->HVH21            <---------At5g28300--------->WRKY18(1)  --------->At4g35610         -- --YAB1--------->ANAC58   <---------TOE2(3)   --------->At4g35610      <---------ZAT2----------->HVH21 ---------At4g35610       <---------YAB1      <---------At4g35610      <---------At4g35610  <-------- -------->At4g35610       <---------TOE1(3) <------ZmHOX2a(1)  <----------DOF2 <-----------HVH21   <-   tgagatgacaggcaataagtactgagctatggttacggtggccataggagcggccaagcggctcactttcttcagctcgacggtgacctgaccactttgc  1359100    --------->ARR14(2)    <---------ARR14(2)                                                     --------->ATHB12 ------>MYC3                                                             <---------WOX13(1)         < -------MYC3                                                           --------->ATHB12          <--- ------->O2       --------->MYB52(1)                                <---------ICU4              ----- --DOF2<-----------GT1         <---------LBD16                      --------->YAB1 <---------At4g35610 --------O2--------->ANAC46<---------CCA1(2)           ---------->ID1 <---------YAB1            <----   catgtggatttacaagagactaactgctcgtctctcggaagaaatggctcttccattgtcgtcttcttaatcttgattgatttgcctctgattttttaga  1359200                                                                                 <-----------GT1                                                                            --------->AHL20(2)                                                      <----------DOF2     --------->AHL20(2)                                                  *TSS<---------DAG2      ----------->TBP                                     --------->AHL20(2)                  <---------AHL20(1)       <---------ATHB12              --------->AHL20(1)                  --------->AHL20(1) <---------ARR14(2)        --------->MYB46(3)   --------->YAB1          --------->AHL20(2) --------->ARR14(2)   --------->ANAC58         <---------ATHB12    >>>>>>>>>RAP2.2     <---------ZAT2 ---------CCA1(2)     --------->ANAC46       --------->WOX13(1)  <---------ARR11(3)    --------->ZAT2 ---ZmHOX2a(2)        --------->ANAC58     <---------YAB1        --------->ARR11(3)    --------->At4g35610 ---->ARR11(3)    <---------WOX13(1) <---------AHL20(2)     ------------>CBF<-----------TBP -----ARR11(3) --------->ICU4        <---------AHL20(1)    --------->TOE2(3)<---------AHL20(2) ------   tcatatccaatcttgtactgatggacgaaaccaatgtaatttattgtcaatgaagacttttcgtcaatatctaaatatatatataactctgctcgaccag  1359300                                     --------->ICU4                              <---------PCF2                                  ---------->DOF2                               <----------ID1                        --------->GLK1(1)                                     --------->ALFIN1                        --------->CCA1(2)                         <---------ANAC55(2)                       --------->ARR14(2)                         --------->ANAC55(1)                       <---------ARR11(3)            <---------MYB59        <-----------RAV1(1)                       --------->ARR11(1)  <---------YAB1         --------->ANAC58                       --------->ARR11(3) <------------CBF        --------->ANAC58                       <---------ARR14(2)-------->ATHB1------>MYB46(1) <---------WOX13(1)                     ----------->ARR10   --------->ATHB51         --------->ANAC46       <---------AHL20(2)       <---------YAB1 <-----------GT1    --------->ANAC55(2) ----->GT1           <---------TOE2(3)  <---------YAB1 ------>MYB83--------->LBD16            <------   tgaaaacatttttttctcatgttaagatatgcatatgaaagtattattgttactaccaaattttagacccgtaattgactgtgggacaaatagttttctc  1359400                                                                                                   <-                                                                                                   --                                                                              <---------ICU4       <-                                                                             <---------YAB1     -----                                                                  ------->TEIL<---------AHL20(2)-----                                                               <---------REM1(1)                <----                                                       <---------YAB1--------->ANAC46           <----                                                    <---------ARR14(2)    <---------YAB1       <-----                   --------->AHL20(2)    ----------->GT1      --------------->AtSPL8           ------      <---------ANAC58                  <---------TOE1(3)     <---------------AtSPL8           ------      <---------ANAC58             <---------AHL20(2)--------->CCA1(2)    --------->ICU4   --------->AHL20(2)      --------->ALFIN1 ----------->GT1  <---------TOE2(3) --------->CCA1(2)--------->YAB1 --------->AHL20(2) -----GT1<-----------HVH21        --------->AHL20(2)--------->ARR14(2)  --------->YAB1    <---------AHL20(2)   tcttcaatgtgtgtcacagaaaaaaatgttattctatttattaaggtaaaaacagatatgatatgatgtacccataataataaatgctccatataaatta  1359500                            <---------AHL20(2)                           --------->AHL20(2)                           --------->ICU4        <---------------AtSPL8 --------->AHL20(2) --------YAB1          --------->AHL20(1) ------->AHL20(2)      <---------AHL20(1) --------AHL20(2)      <---------AHL20(2) ---->AHL20(1)        --------->YAB1                                                <------NtERF2 ---->AHL20(2)        --------->AHL20(2)                                          <---------RAP2.6(2) -----AHL20(1)        <---------AHL20(2)          <---------AtLEC2           ======================== -----AHL20(2)    --------->AHL20(2)             <-------TEIL                <---------O2 ----AHL20(2)    <---------AHL20(2)            <-------MYC3                  --------->O2 --->AHL20(2)    --------->AHL20(2)            ------->MYC3                  <---------TGA1a --->YAB1   <-------TEIL<---------YAB1    --------->ARR11(3)    <---------YAB1 --------->ALFIN1   tattattaagagggtccatataaattatatttattaaacacatatatcatgtgcatgaattggtttctgatttttgtagacgtggtggccttgttgtttc  1359600                       <---------RAP2.6(3)                -------->ATHB1                --------->ATHB12                -------->HAHB4                <---------ICU4                                                                  <----                --------->ATHB51                                                                <----               <---------YAB1                                                               <--------               <---------ATHB51                                                            <---------TOE2(3)               --------->ICU4                                                        --------->LBD16            <---------AHL20(2)                                               ------>ZmHOX2a(2) <-----         ----------->GT1     ----------->GT1                             <---------YAB1<----------DOF2        --------->DAG2 ------>NtERF2            <---------ANAC58      ------->TEIL <---------LBD16       ---------->DOF2<---------ETT(1)          <---------ANAC58   <---------YAB1--------->ARR14(2) =================bZIP_DOF   --------->YAB1  <-----------GT1 <---------TOE2(3)   <---------ARR14(2)   gatttttcaaaaagttaattattgccgacaatagtgaatagtttttttttccttgtttgatataatgttatgaatatgatccaattccggtttaatgttg  1359700                                  <-------GAMYB                                 <------MYB46(1)                                 <---------MYB46(3) --------->At4g35610    <---------ARR14(2) <---------At4g35610    --------->ARR14(2)                                    --------->ATHB12 --MYB83            <---------At4g35610                      <---------HSFB2a(2) --MYB46(1)         --------->At4g35610                      --------->HSFB2a(2)<---------WOX13(1) -- ---RAV1(1)        ------->GAMYB <------MYB83         <---------AtMYB61      --------->ICU4      <--- ----AtMYB61    <-----------GT1<--------P           <----------DOF2          <---------YAB1      <---   gtctgatgacattcggtttaacagcagattggagttggttattgaaacggttcgctttggtttacagaagaaggaagttatgattggaagactctcattc  1359800  Previous    Next  AGI:  At2g04080.1    Description:  MATE efflux family protein. similar to ATDTX1, antiporter/ multidrug efflux pump/ multidrug transporter/ transporter [Arabidopsis thaliana] (TAIR:AT2G04040.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04050.1); similar to transporter [Arabidopsis thaliana] (TAIR:AT2G04070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69572.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528); contains InterPro domain MATE family transporter related protein (InterPro:IPR015521) Range:  from: 1357186    to: 1359250    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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