Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ANAC58                                                                  <---------ANAC46                                                                  <---------ANAC58                                   <-------GAMYB--------->ALFIN1 ---------->ID1    --------->CCA1(2)              --------->At4g35610<---------ARR14(2) ------ZAT14                       <---------At4g35610--------->ARR14(2)     ---------->ID1 ----->ZAT14                      <---------MYB46(3)<------MYB83<-----------GT1                 ----- -->LBD16 <------ZmHOX2a(1)    ------------>AtMYB77 <------MYB46(1)     --------->ATHB12     --------   gaactgatatgaggacacatatagggatgttagaggcagttgcagagtatgtgtaggttccgattttttcgtattgtttggctccataagcttggccaca  1338900                 <---------MYB52(2)                --------->At4g35610                --------->LBD16               --------->ANAC58               --------->ANAC58               --------->ANAC46           <---------YAB1          --------->ANAC58          --------->ZAT14                --------->AHL20(2)--------->CCA1(2)          <---------ZAT18    --------->ZAT14              <---------ARR11(3)          --------->ZAT18    <---------ZAT18          --------->YAB1       --------->ARR11(3)          <---------ZAT14    --------->ZAT18  <XXXXXXXXXXXXXXXXXXXXMIR172A/B =====================HOX2a_HOX2a   --------->GLK1(2)-------->P          <---------AHL20(2)--------->ARR14(2) ------>ZmHOX2a(2) ----->DOF2   --------->MYB46(3) ---------->DOF2<---------ZAT6    --------->ANAC58         <------ZmHOX2a(1) --->RAV1(1)------->TEIL     <---------ZAT14  <XXXXXXXXXXXXXXXXXXXXMIR172E <---------ARR11(3)   aagagtttctagtgcacccgctaacccaaactgcacaaagaattaatatagtgttatcaagatttgagaggcaacttgatcttgaacttaagaggagaga  1339000                                                                            --------->ALFIN1                                                                          --------->At4g35610                                                                          <---------At4g35610                                                                          --------->ZAT2                                                                          <---------ZAT2                                                                      <------NtERF2                                                                    <---------ANAC46                                                                    --------->DEAR3(1)                                                                   <---------LBD16                ---                                                                   --------->ATERF1(1)            ---                                                                   <------NtERF2                  ---                                                                 <---------O2                    ----                                    <---------DOF5.7(2)          --------->DEAR3(1)              <---                                   <---------ARR14(2)            <---------DEAR3(1)      <-----------RAV1(1)                                   --------->ARR14(2)           --------->ATERF1(1)  <---------YAB1                  <---------MYB59--------->LBD16               <---------ATERF1(1)--------->ZAT18<---            <---------ICU4      --------->ANAC46              ----------->HVH21 --------->ZAT2  <----            --------->YAB1      --------->LBD16     <-------GAMYB--------->O2   --------->At4g35610           <---------YAB1      <---------LBD16     <---------MYB46(3)--------->LBD16<----------------         <---------CCA1(2)   ------->TEIL        <------ZmHOX2a(1)------>NtERF2 <---------At4g35610   gtagttatagcatatcattaccaaaatactgaacccggaaacgtttgtgaaggaggttgcaagagcgacgccggagagctggagctcaccattgtggcca  1339100                                                <------NtERF2                                                ------>NtERF2--------->WRKY18(1)                                               --------->RAP2.6(2)    <---------ZAT18                                               ------>NtERF2------>NtERF2                                              <---------RAP2.6(2)   --------->At4g35610                                              <---------DEAR3(1)    <---------At4g35610                                              --------->DEAR3(1) <---------ZAT2    <---------YAB1      --------->YAB1       --------->ATERF1(1) --------->ZAT2               ------- ------>DEAR3(1)        <---------ICU4     --------->TGA1a --------->RAP2.6(2)                ------- ------>MYB46(3)       --------->ICU4      ==========================================bZIP_DOF <------ -------->HVH21        <---------ATHB12    <---------O2   --------->ATERF1(1)     <---------ZAT2 ----->At4g35610   <---------------------WRI1--------->RAP2.6(3) <---------At4g35610      --------->At5g28300 ---NtERF2        --------->ANAC58         --------->O2  <---------At4g35610      <---------At4g35610 ------At4g35610  --------->ANAC46         <---------TGA1a<---------RAP2.6(2)     --------->At4g35610 -----ATERF1(1)   --------->ANAC58     <-----------HVH21 --------->At4g35610      --------->ZAT2----- -AGL1       ----------->HVH21        --------->YAB1   <------ZmHOX2a(1)  <----------DOF2 --------->DOF5.7(2)   gcgaccatgactgaaatgacaggcaataagtactgagcaatggtcacggcggccataggagcggccaagctgctcactttcttcagctcgacggtaacct  1339200                                                                                               <-----                                                                                           --------->ALFIN1                                                                                         <---------ANAC58           <-------MYC3                                                                  <---------ANAC58           ------->MYC3                                                             ---------->DOF2   <----------DOF2                                                          ------>ZmHOX2a(1)  <-----   <---------DAG2                                                          <---------------AGL15 ---->RAV1(2)                                                              --------------->AGL15 -->At4g35610           ----------->HVH21        ---------->DOF2          ----------------->AGL1 ---At4g35610         --------->ANAC46     <---------HSFB2a(2)            ----------------->AG <----- ------>HVH21   <----------DOF2            --------->HSFB2a(2)          ------>ZmHOX2a(1)<---------ANAC46   gaccacttttccatgtgtctttacaggggacaaggtgctcatcttgcagaagaaagggctcttccattgttgtccttcctaatgttgaaagccgtgtgcg  1339300                                                   <---------ATHB12                                               ------------>CBF ----ANAC58              <----------DOF2      >>>>>>>>>MYB2                                   <------ ----ANAC46          <---------CCA1(2)    ------->GAMYB          <----------DOF2           <--------- ----ANAC58   <---------YAB1           --------->MYB52(1)   <----------DOF2  <-----------RAV1(1)   <-   tataatctctgatgttattcttcttatcttttatagacagacaacgaaaaccaatgtttagacttttctttttggaaatttgtgggactagaatattgaa  1339400                                                                    <---------YAB1                                                                    <---------AHL20(2)                                                              ----------->GT1          <---------TOE2(3)                                                            ---------->DOF2         --------->DOF5.7(2)                                                       --------------->AGL15      --------->ANAC58                                                   <---------ARR14(2)             --------->ANAC46                                                   <---------ARR11(3)             --------->ANAC58   --------->ANAC58                                --------->ARR14(2)           <---------ALFIN1   --------->ANAC46         --------->ARR11(3)     --------->ARR11(3)  <---------YAB1 ---------->DOF2   --------->ANAC58     ---------->DOF2            <---------GLK1(2)--------->AHL20(2)<---------DOF5.7(2) <-----------GT1  --------->MYB46(3)             ----------->ARR10  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---AHL20(2)--------->At4g35610              --------->ANAC46--------->DAG2    <---------REM1(2)   -- ---CBF     <---------At4g35610         <-----------GT1<---------------AGL15 <---------ETT(2) ------- ----------GT1   -------->P <---------ARR11(3)--------->DEAR3(1) --------->AHL20(1)--------->TOE2(3)   tttacacgactcttagctcaaccagtaaaaggtattctatattttccaccgaagatactcaaaaaagtatattattatgtctacacgttaaagtataaaa  1339500                   <---------ANAC46                               ------------>CBF                   <---------bZIP60(2)                      ------->GAMYB                  ----------->STF1                      <---------WRKY45                  <---------TOE2(3)                     <---------WRKY38(1)             <---------AtLEC2                ----------->TGA1                        <---------WRKY12          <------ZmHOX2a(1)                <---------ATHB12                        --------->ETT(2) <------ZmHOX2a(1)      -----            ------------>CBF                        <---------AtMYB61   ----------->GT1<-------TEIL ------->ZAT14  ----------->HVH21           <---------ZAT18--------->MYB46(3)   <---------TOE2(3) --->DOF2 ---------->ID1              <----------DOF2  --------->WRKY18(1)  --------->YAB1      -----   gtatagtagtttttcgcaatgacgttgtatagtttcttctctttagtggacgttgtggtcaacagtcatccaataggataataaggaagtgcatgaacaa  1339600                           <---------YAB1           <---------PCF5--------->YAB1                         <---------ANAC58   <---------YAB1   <---------ANAC46    ----------->RAV1(1)     <---------ANAC58 ---->ANAC58        ----------->GT1    <----------ID1           <---------ANAC46             <------- ---->ANAC58       <-------TEIL<---------ATHB12         ---------->DOF2      <---------ARR11(3)   gaaatatacttggggaccaagttcgtataatcaatgactaaacaacaaaacaactcgaaaaagattacttgggaatcaagttctaatattcagagattga  1339700                                                                    ----------->HVH21                                                                   ------->MYC3                                                                   ------->MYC2                                                                  --------->ANAC58                                                                  --------->O2                                                                  --------->ANAC58                                                                  <---------O2                                                                  --------->TGA1a                                                                  --------->ANAC55(1)                                                                  --------->bZIP60(2)                                                                  <---------TGA1a                                                                  ========================MYC_MYB                                                                  ===================================                 --------->ICU4                                   <---------ANAC55(2)         <------               --------->AHL20(2)                                 --------->ANAC46           <-------              --------->AHL20(2)                                  --------->ANAC55(2)        <-------              <---------AHL20(2)                                <-------------DYT1         <---------At5g28300          --------->AHL20(2)                               --------->ZAT14               ------>ZmHOX2a(1)     --------->YAB1                     --------->AHL20(2) <---------ZAT18    --------->MYB46(3) --------->AHL20(2)             --------->GLK1(2)   <---------ZAT14<-------MYC3   ------->GAMYB<----- <---------AHL20(2)        =================================================bZIP_DOF    --------->TOE2(3) --WOX13(1) --------->YAB1 ---------->DOF2          --------->ZAT14<-------MYC2----------->RAV1(1)   caatttatcaaaaaaaataattttgaacaaaaagaatttgttttaaatagcaactacacagtgcaaacacgtgactcacaacaacagcatccttaccgtg  1339800  Previous    Next  AGI:  At2g04050.1    Description:  MATE efflux family protein. similar to ATDTX1, antiporter/ multidrug efflux pump/ multidrug transporter/ transporter [Arabidopsis thaliana] (TAIR:AT2G04040.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04080.1); similar to transporter [Arabidopsis thaliana] (TAIR:AT2G04070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69572.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528); contains InterPro domain MATE family transporter related protein (InterPro:IPR015521) Range:  from: 1337383    to: 1339267    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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