Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ANAC58   --------->ANAC58    <------ZmHOX2a(1)    --------->ANAC58 <---------ANAC58             ---------->ID1 ---------->DOF2      ----------->GT1       --------->ANAC58 <---------ANAC58        --------->ATHB12 -DOF2           --------->CCA1(2)   <-----------RAV1(1)     --------->ANAC46  --------->YAB1   atgtaaagccagagaattgatatgaggaaacaaattggtatgttggaagcaatagcagagtatgcgtaagttccgattttttcatattgtttggctccat  1336100                                                    <---------ICU4                                                    --------->ATHB12                                                    <--------ATHB1                                                    -------->HAHB4                                                    --------->ATHB51                             ------>MYB83          <---------YAB1                             ------>MYB46(1)       <---------AHL20(2)                           <---------MYB55(2)      --------->AHL20(2)                           --------->MYB46(3)      --------->ICU4                          --------->ANAC58         <---------ATHB51                          --------->ANAC58       --------->YAB1                       --------->ZAT14    <---------ZAT14                       --------->ZAT18    <---------ZAT18                       <---------ZAT18    --------->ZAT14                       <---------ZAT14--------->ANAC46         ---------->DOF2 --------->PCF2 --------->ANAC46      ----------->RAV1(1)------->TEIL <---------ALFIN1   aagcttggccacaaagagtttcaagtgcacccactaatccacactgcacaaaaataattgaagtgttttcaatacttgagagagtccatttgattcttga  1336200                                                                                          --------->ZAT2                               ---------->DOF2                                            <---------ZAT2                               ===========================bZIP_DOF                        --------->At4g35610                            --------->TOE2(3)                                         --------->ALFIN1                            --------->YAB1                 <------ZmHOX2a(1)        <---------ZAT2                           <---------YAB1       <---------TGA1a                     --------->At4g35610                         <-----------GT1        <---------O2                        <---------At4g35610                      --------->ATHB51          <---------ANAC58                    --------->ZAT2                      <--------HAHB4            <---------ANAC46               --------->LBD16                      <---------ICU4            <---------ANAC58             <---------LBD16                     <---------YAB1          ----------->HVH21              ------>NtERF2 <---------At4g35610                     --------->ICU4          ----------->TGA1              <---------ALFIN1       <--    --------->DAG2 --------->YAB1           <-----------HVH21            ----------->RAV1(1)     <---   gttgaaaaggttagagtcatagcataattaccataatgctaaaaccggtgacgtttgtgaaggagtttgcaagagcgacaccggagagctggagctcgcc  1336300                                                                                <---------ZAT18                                                                              <---------At4g35610   -               <---------WRKY18(1)                                            --------->At4g35610   =        --------->MYB46(3)        --------->YAB1                        ---------->DOF2             <        --------->DEAR3(1)        <---------ICU4                      ------>NtERF2                 =        ----------->HVH21        <---------ATHB12                    --------->RAP2.6(2)           <-       <---------At4g35610   <---------------------WRI1             --------->ATERF1(1)         -----       --------->At4g35610  --------->ANAC58                        <---------RAP2.6(2)         =====       <------NtERF2        --------->ANAC46                       <---------At4g35610  <----------DOF2      <---------ATERF1(1)   --------->ANAC58       <<<<<<<<<<<<<<<<<LFY--------->WRKY18(1)      ===== -------MYB52(1)       ----------->HVH21         <-----------HVH21 --------->At4g35610  ============= ----GAMYB    ----------->HVH21  --------->ICU4 --------->YAB1   <------ZmHOX2a(1)      =============   gttgtggccagcgaccatgaccgagatgacaggcaataagtactgagcaatggtcacagtggccataggagcggccaagcggctcactctctttagctcg  1336400                         <---------ANAC46                         <---------TGA1a                         <---------ANAC58                         <---------ANAC58                      ----------->HVH21                    --------->TGA1a -------->At5g28300 <---------O2 ==================================MYC_MYB -------GAMYB       --------->bZIP60(2) =============================MYC_MYB --------MYB46(3)   <---------TGA1a                                               --------->TOE2(3) ------->AtMYB77    --------->O2                                                <---------TOE2(3) =============================MYC_MYB                                           <---------TOE1(3) ==================================MYC_MYB             --------->At4g35610     <---------DOF5.7(2) =============================bZIP_DOF<---------HSFB2a(2)            ------>ZmHOX2a(1)            <-- ==================================bZIP_DOF     <---------CCA1(2) <---------ATERF1(1) *TSS  <--------   acggttaatggatttgtatgccatgtgacttgagaagggactagaagctcgtctctcagaagaaatggctcctccattgtttaacgttgaaggcctttcc  1336500                                                                                              -------                            <---------YAB1                                                   --------                           <----------DOF2                                                   <-------                          --------->YAB1                                                     <-------                       <---------CCA1(2)                   --------->ANAC58         <----------------                       ------>ZmHOX2a(1)                   --------->ANAC58       ----------->TGA1                   <-----------GT1          ------------>CBF                      ----------->HVH21<-                  <-----------GT1     ------>MYB46(1)   ---------->DOF2        --------->ALFIN1 <---- --------DOF2<---------ARR11(3)       ------>MYB83  <----------ID1            ------->MYC3   -------- --DOF2      --------->ARR11(3)    --------->DEAR3(2)----------->RAV1(1)      <-------MYC3 ----------   ctttgattttaagatgatatttatcctatctttatagaccgactaagtcaataaacaacaaaggcaacttgaactacaaacgtggtgacgaagtagatat  1336600         --------->ANAC58    ---------->DOF2                                                       --------->AHL20(2) -->CCA1(2)                                                               <---------AHL20(2) ->ARR11(1)                                                           --------->YAB1 --ARR11(3)                                                          <---------YAB1 --ARR14(2)                                                          <---------AHL20(2) -------TaNAC69(2)       <---------ANAC58                     <-----------GT1     --------->CCA1(2) --------YAB1   <-------TEIL                               <---------KAN4(2)     <---------ARR11(3) -----YAB1    <---------ARR14(2)                           ---------->TaMYB80    --------->ARR11(3) ->ARR14(2)   --------->ARR14(2)                        --------->ANAC58 --------->YAB1 ->ARR10 --------->ANAC58<---------ANAC58               --------->ANAC58<---------YAB1        <------   gatgagtaaagaagcaaattcgttttgacttgtttgaaaatatagatactagtggcacacgaatatactatattataaaaatagatatatagaatataca  1336700                                         <---------AHL20(2)                                     <---------AHL20(2)                                     --------->AHL20(2)                             <----------DOF2                          <-----------GT1<-----------GT1                                        <----                --------->ICU4       --------->ATHB51                                      <---------ANAC46                <---------YAB1   <---------AHL20(2)                               --------->AHL20(1)           --------->bZIP60(2)   --------->AHL20(2)                               <---------AHL20(2)    <---------ICU4  <---------ZAT6   <---------ICU4                              <---------AHL20(2) <---------AHL20(2) ----------->GT1 --------->ICU4                               --------->AHL20(2) -TEIL   <---------bZIP60(2) <---------DAG2                                      --------->ATHB51   tattaaaaatgacatgtcattagtgttaatactttttaattatttacataagaacatatgtgaagactgaagactaatatgaattattttgttttgtaga  1336800                             <---------ANAC46                          <----------DOF2                         <---------YAB1                                               <---------ANAC58                       <-----------GT1                    ---------->DOF2      <---------AHL20(2)                       <---------AHL20(2)      --------->AHL20(2)            --------->ANAC55(2)                    <---------ICU4           <---------AHL20(2)       <---------------AGL15--------->TOE1(3)                   --------->ICU4            --------->AHL20(2)       --------------->AGL15--------->TOE2(3)                   <---------AHL20(2)      <---------AHL20(2)      --------->ZAT6     <---------ANAC58 -----ZAT6         --------->AHL20(2)--------->AHL20(2)  ------>ZmHOX2a(1)<---------AHL20(2)        <   gtttgaacattcaatcttgtattaattacttttgtggatttttatatttttatatagtcctaaagtttgactctaatttaagtaatttgcttaccttaag  1336900                                 ------>ZmHOX2a(2)                                       --------->At4g35610                                <---------At4g35610                                     --------->RAP2.6(2)                               <---------AGP1                      <-------GAMYB ----------->HVH21                       --------->ARR11(3)                         <---------MYB46(3)    --------->DEAR3(1)                       <---------ARR11(3)                        <---------TOE2(3)    --------->At4g35610                   ---------->DOF2           <---------TOE2(2) <-----------RAV1(1)    <---------At4g35610            <---------ZAT18    <---------ARR14(2)          --------->ATHB12   --------->DAG2 ---------YAB1  <----------DOF2--------->ARR14(2)         <---------ATHB12   ---------->DOF2   ttttgattctttagaccactttaaagacatttggatctgattttacacaggttttagtaaatcatttgtggttgaaactaaaagtgacagccgctctcaa  1337000  Previous    Next  AGI:  At2g04040.1    Description:  ATDTX1; antiporter/ multidrug efflux pump/ multidrug transporter/ transporter. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04080.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04050.1); similar to transporter [Arabidopsis thaliana] (TAIR:AT2G04070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69572.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528); contains InterPro domain MATE family transporter related protein (InterPro:IPR015521) Range:  from: 1334509    to: 1336486    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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