Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->KAN4(2)                                                        <---------HSFB2a(1)                                                        --------->HSFB2a(1)                                 <---------YAB1   ------>MYB46(1)                               <---------ICU4     --------->MYB52(1)                               -------->HAHB4     ------>MYB83------>ZmHOX2a(1)                               --------->YAB1    --------->MYB55(1)                              <---------ATHB51  <---------MYB52(2)                              --------->ICU4    <---------MYB55(2)                            <---------ICU4      --------->MYB46(3)                --------------->AGL15                            --------->YAB1      <---------MYB59                  ----------------->AG                           --------->AHL20(2)   >>>>>>>>>>MYB61              --------->GLK1(1)                           <---------AHL20(2)   <---------MYB46(2)           <---------GLK1(1)                       <---------ARR11(3)       <---------MYB111(1)          --------->HSFB2a(1)                       --------->ARR11(3)       <---------MYB111(2)         --------->ARR14(2) ---------ANAC58      --------->YAB1            --------->AtMYB61  <-----------HVH21      ---------->ID1 ---------AtLEC2 <---------AHL20(2)            --------->ANAC46 <----------DOF2<-----------GT1 ---------ANAC46 --------->AHL20(2)   --------->GLK1(2) <---------HSFC1(2)  <---------GLK1(2) ---------ANAC58<---------AHL20(2)   <---------GLK1(2)  --------->HSFC1(2)  <---------ARR14(2)     --   ttgcatgtaatttgatattttaaatgatattaattatgagattctttccacctaacgaaaattcctctttgtcaagcggattttccatttttgtcatctt  1197500                                                                          --------->LBD16                                                                         --------->LBD16                                       --------->CCA1(1)                 --------->ANAC46                                       --------->RVE1(1)                <---------HSFB2a(2)                          <---------WOX13(1) --------->WRKY38(1)   <------MYB46(1)                  <                        --------->ATHB12--------->GLK1(2)          <------MYB83                 -----                       <---------AHL20(2)    --------->WRKY12     <---------------AtSPL8        <----                     <---------ANAC55(2)--------->ARR11(3)        --------------->AtSPL8        <----              ----------->RAV1(1) --------->YAB1                  --------->MYB59              ------   --------->ICU4    --------->ANAC55(2)<---------ARR11(3)    --------->ATHB12             ---------- ------->TOE2(3)<---------ICU4   <---------YAB1            <-----------------AGL1      <---------ICU4   tcgtcaaaattagcaacaacattacttaattggttatcaaaaaatctttgactgtatatttccatgatttggtacccgaaaatatagaattatgccaata  1197600                                          --------->YAB1                                          <---------ICU4                                    --------->YAB1                                    --------->TOE2(3)    --------->ARR11(3)     --------->ANAC46 -----------GT1            --------->ANAC58 ---->AHL20(1)     --------------->AtSPL8--------->ICU4         <----------DOF2                   <-- -----AHL20(1)  <---------YAB1  --------->ICU4           ------------>CBF         ----------->GT1 --- -----ARR11(3) --------->AHL20(1)  ----------->GT1 --------->ARR14(2)             --------->ANAC55(2) ----->TBP     <---------AHL20(1) <---------TOE2(3)<---------ARR14(2)             <---------ANAC55(2) -->CBF ----------->GT1    --------->ANAC58        --------->ICU4    <---------TOE2(3)           <---   tataactatcttgttaatatttttgtaccacgaaataatgttaattatcagcaaatatggacaattcttttatggaaaacaaataagtaactaggtgttt  1197700                                                                      <---------ARR11(3)                                                                  ---------->DOF2                                                                 <---------AHL20(2)                                                               ----------->TBP                                                             --------->AHL20(2)                                                             ----------->TBP                                                             <---------AHL20(2)                                                           ----------->TBP                                                         <-----------TBP <----------DOF2  <---------ATHB12                       <---------AHL20(2)     --------->ICU4 ---------GT1     --------->ICU4                         --------->AHL20(2)   ---------->DOF2 ------->ID1  ------------>CBF  <------------CBF       <-----------TBP--------->ARR11(3)        <---- --------GT1  <------NtERF2   <---------YAB1         --------->AHL20(2)<---------GLK1(1)  -----------   ttccttttttttagtcggcaataactaggtttaaaattgagactcttcttggcaaatatttatatatataaagatttcagtaaagattagagaagtataa  1197800                                                 <----------DOF2                                                 <---------DAG2                                              <-----------GT1                                  ------                                      <----------DOF2                      --------->AHL20(2) <------ -------GT1                        --------->GLK1(2) <-----------GT1  XXXXXXXXXXXXXXXXXXX>MIR156A-F >GT1 ------>ZmHOX2a(1)  ---------->DOF2------------>CBF           --------->MYB52(1)<-------TEIL<---   acttcttcctcttcttgttttctacttgaaagaagagactctttcaattcactttttacaagagagaattaacagaaaaaaatgagattcacttctatga  1197900                                                                                     <---------YAB1                                                                                    <---------AHL20(1)                                                                                --------->ATHB51                                                                                <--------HAHB4                                                                                --------->YAB1                                          <---------TOE2(3)                     -------->ATHB1                                          <---------TOE1(3)                     <---------ICU4                                         <-----------GT1             <-----------GT1<---------AHL20(2)                                         <---------DOF5.7(2)        <---------AHL20(2)                                       --------->DOF5.7(2)          <---------YAB1<---------YAB1                                      --------->TOE2(3)     <---------MYB52(1) --------->ICU4 --->YAB1          --------->YAB1     --------->TOE1(3)    --------->LBD16     <---------ATHB51 ---YAB1          <---------ZAT6      <----------DOF2    <---------LBD16       <---------ATHB12     - ------YAB1 <---------ZAT6         <-----------GT1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         -   tttttgttcttgtagtgatactgataaactcattgtttaactttaacgttttggcttcatccggtatgtttttattgtccaattattattttttgtcatg  1198000                                                           <---------DAG2                                                           <----------DOF2                                                --------->GLK1(2)              --------->ARR11(3)                <---------ARR11(1)              <---------AHL20(1)                --------->ARR14(2)              --------->AHL20(1)                <---------ARR14(2)     <---------YAB1                             ------->TEIL     --------->ICU4                            <---------ARR14(1)                      <---------MYB46(3)   <-----------GT1                           <---------ANAC58                   --------->ZAT6 <----- ---------->GT1  <---------AHL20(2)          <---------ANAC58                 <-----------GT1 ------- -------->YAB1<---------ARR11(3) --------->ICU4<---------CCA1(2)       ---------->ID1  ----------->GT1   tatagtaactattgaatattttaaaacatgttgtaatgtttatgtgtgcgtatctgttacactttttgtttttgtttttttaacactagttgttaatatg  1198100                                                                                        --------->ANAC46                                                                                        --------->ANAC58                                                                                  <---------ANAC58                                          --------->REM1(2)                       <---------ANAC58                              --------->ZAT18                                <---------WRKY18(1)                              <---------ZAT18                             <---------ANAC58                              <---------ZAT14                             <---------ANAC58                            <---------ZAT18       <---------TOE2(2)       <---------AtLEC2xxxxxxxxxxx                            --------->ZAT18    --------->ANAC46     <-----------RAV1(1) --------->ANAC58             ----------->RAV1(1)    --------->ANAC46   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       ------>ZmHOX2a(2)   <---------ANAC58   <---------LBD16      ------->TEIL   <---------ANAC46 ------RAV1(1)           <---------ANAC46--------->AtLEC2       <---------YAB1--------->RAP2.6(3)  <- -->ARR11(3)<----------ID1 <---------ANAC58 <---------REM1(2)--------->ICU4 ----------->HVH21--------   ttgcagtgatcgaaacaacaaaaaatgatgtgtgctctactccatgtacacggaggtatggaacttatgaatgttggcatgactgcttgcacgagaggta  1198200                  <---------WOX13(1)      <---------RAP2.6(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <---------ATHB12 xxxxxxxxxx>smallRNA(fl3)            --------->DAG2   --------->ATHB12 --------TOE2(3) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ATHB12               ---------->ID1 --->GT1    --------->ALFIN1        ---------->DOF2--------->WOX13(1)   ----------->GT1 <----------DOF2   taacgatggaggctgtgttgatggacgatgttgttgcaaaaagtgatagaaatcaatgaatggtctcgtttgaacggtggaattttgtttctttaacatc  1198300                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                       --------->ATHB51                                                                       --------->ATHB12                                                                      <---------YAB1                                                                      <---------AHL20(2)                                                                   <---------AHL20(1)                                                                   --------->AHL20(1)             ---                                                                   <---------AHL20(2)         <------                                                                   --------->AHL20(2)         <------                                                                  --------->AHL20(2)          -------                                                                  --------->YAB1              <------                                                                 <---------YAB1               <------                                                              --------->AHL20(1)              <------                  <---------ATHB12                            <---------AHL20(2)            <--------           <----------DOF2        <---------AHL20(2)          --------->AHL20(2)         --------->MYB52(2)       ------->TEIL--------->AHL20(2)    --------->MYB46(3)   <---------AHL20(1)      <----------DOF2   agatttatgtatgcttttcaatgaaataaaacttattttttgaacaactagaaataaaactaaatttattatattattgcttctatgactttagttactt  1198400  Previous    Next  AGI:  At2g03913.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G03936.1); contains domain PD694200 (PD694200); contains domain PD864278 (PD864278) Range:  from: 1197882    to: 1198246    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version