Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------GLK1(2)                                                               --------->ARR11(3)                                                           ---------->DOF2                                                        <---------At4g35610     ---------->DOF2        <----------DOF2           --------->ZAT14         <---------ANAC58 ------DOF2               ---------->ID1       ----------->HVH21--------->GLK1(2) -->At4g35610       <----------DOF2            <---------YAB1  <---------ARR11(3)    ----------->GT1 ---At4g35610  ---------->DOF2     ---------->ID1     <---------ZAT18     <----------DOF2 ---ZAT2  ----------->GT1<-----------GT1<----------DOF2 --------->At4g35610   <---------ANAC58   ttgtgagaaaagaagtttaaagctttttttcttttttgtcttctttcttatgacagtgagctaaagattcttcattctttgcttaagagataaaaacttt  1162100                                                                                                 ----                        --------->ARR14(2)        <---------ICU4                                 <---                        <---------ARR14(2)        ----------->GT1                                <---                --------->ATHB12              <---------YAB1           --------->ANAC58          <---                <---------ICU4          <---------YAB1                 --------->ANAC58          <---               --------->ICU4          <---------GLK1(2) --------->ANAC58                    <-------               <---------YAB1         -------->HAHB4     --------->ANAC46                    <-------             --------->YAB1      --------->MYB46(3)      --------->ANAC58               --------->AHL20(2) --------->REM1(1)<---------WOX13(1) <---------ATHB12    --------->ANAC55(1)      <-----------GT1<---   gctacatttgtgtaaccatgattgcaaatttgctaacaaatgattcttacaattgttacaagtaatctagattaagccatgtttttgcaattttttcttg  1162200       <---------TOE2(3)       <---------TOE1(3)                                                            <---------WOX13(1)    <---------YAB1                                                                 <---------ANAC58 ----->ANAC55(2)                                ----------->GT1                    <---------ANAC58 ------ANAC58                              --------->AHL20(2)                   <--------P ------ANAC46                             <---------AHL20(2)                    <---------WOX13(1) ------ANAC55(2)                          --------->AHL20(2)                  <---------MYB46(3) ------ANAC55(1)                        <----------DOF2                  <---------ZAT14   <--------- --ANAC58                      --------->ARR11(3)            ---------->DOF2 <---------AtMYB61 --ANAC58          <----------DOF2<----------DOF2     --------->DAG2     --------->ZAT14------->TEIL ------ANAC58<-----------GT1   <---------ARR11(3)    ---------->DOF2<---------YAB1--------->ATHB12   cgtattgttatggtattacagcttttatctaaatgtctttttctttaaattagtaaaaagttggaaagtggtcattgtagtggttgattgcatctttttg  1162300                                                   ------->MYC3                                                  ============================================bZIP_DOF                                                  <---------TGA1a                                          <---------ANAC58                                          <---------ANAC58     --------->ATHB12                 ======================bZIP_DOF    --------->ICU4                    <----------DOF2    <---------YAB1                 <---------ARR11(3)     ----------->HVH21                --------->AHL20(1)   xxxxxxxxxxxxxxxx>smallRNA(i)    --------->GLK1(2)     <---------WOX13(1)        ------>ZmHOX2a(1)  --------->YAB1                   --------->ARR11(3) ----------->HVH21            <----------DOF2  <  <---------ICU4                   <-----------ARR10--------->ALFIN1           ------->TEIL<---------AHL20(1) --------->ICU4                   <---------GLK1(2)<-------MYC3             --------->ANAC55(2)<----- <---------YAB1               ==============================bZIP_DOF        <---------ANAC55(2)<----- -DOF2                        ---------->DOF2     --------->TGA1a          --------->MYB59 --------->ARR11(3)   ctcatgatgatttgtttttggacttgagaaaataaagaatcttttcgttcacatgtgtgactgaccataagttaagttatgtatcctttagaatattttg  1162400                                                                            <---------CCA1(2)                                             --------->WRKY12         <---------ANAC46         --------->MYB52(2)               <---------ANAC46            <---------ANAC58    <---------TOE1(3)                  <---------ANAC58               <---------ANAC58     --------->CCA1(2)    <---------TOE2(3)                  <---------ANAC58           <-------GAMYB<---------MYB59  <---- ----------DOF2              ------>ZmHOX2a(1)                   <---------MYB46(3)     <---------TOE2(3) ----ANAC58                ----------->RAV1(2)   --------->MYB46(3)<--------P------->TEIL --------->ARR14(2) ----ANAC58     <-----------HVH21  <------------CBF             <---------TOE2(3)   <----------DOF2<-   tgccttaaggtttgtttctgtcacaatcttcctggcccattgcttcgttgaacaactcttcatatggaggttgcttctgtatctaactttgagatttgct  1162500                                   <---------ANAC58                     --------->HSFB2a(2)          <---------YAB1       <---------WOX13(1)          <---------ANAC58      <------------CBF             <---------ANAC46                                 ------>ZmHOX2a(1) -----YAB1          *TSS --------->CCA1(2)   ---------->ID1                  <---------YAB1 --------WOX13(1)  ------>ZmHOX2a(1)   <---------YAB1<---------YAB1   <----------DOF2 <---------ANAC46   gatagatagattgattctatcctctagatagaagtttgcttatacttgtcttcttattcttgttatctgtttctttcttatgagtcctgcttgaaactgt  1162600                                              <---------ANAC58                                              <---------ANAC46                                         <-----------RAV1(1)<----------DOF2                                <---------MYB46(3)   <---------ARR14(2)                                <------MYB83 <---------MYB46(3)                                <------MYB46(1)<----------DOF2      <----------DOF2                     --------->ALFIN1----------->HVH21--------->CCA1(2)                   <---------ANAC46 <------NtERF2    <---------ARR11(3)              <----------DOF2  <---------AtMYB61     --------->ARR11(3)      <---------GLK1(2)     <---------MYB46(3)<---------ANAC58<---------AtMYB61   ttgatagagattgtctctttgatgtgtagattgttggtcgcgactggtgcttgaagatatagctttggttctttatgcaaggtttactctcttagaagaa  1162700                                           <----------DOF2                                          <---------ANAC58                                      <----                                          <---------ANAC58                                    <------                                    <---------ANAC58                                          <------                                    <---------ANAC58          <---------YAB1         <---------MYB46(3)          ---------->DOF2          <------------------------ANAC81                  --------->ALFIN1     ----------->GT1  <----------DOF2<----------DOF2 <----------DOF2  --------->GLK1(2)   <----------DOF2   tgagagcaggtataaagtcttaagcttttgaacattttgcttttgctttgatggtctttgaattgttatgggaatcagtagttcaagtggttctttccgt  1162800                     <------MYB46(1)                     <------MYB83                     ----------->GT1              --------->ANAC55(2)              <---------ANAC55(2)         --------->YAB1         <---------ICU4         -------->HAHB4                                              <---------ANAC58        --------->ICU4                                               <---------ANAC58        <---------YAB1                                             --------->ARR11(3)   <---------At4g35610                                 --------->ANAC46--------->ICU4             --- -----MYB52(1)--------->ANAC58                    ------->TEIL     <---------ARR11(3)             --- ---ANAC58    --------->ANAC58              --------->ICU4 --------->LBD16                <-------TEIL ---ANAC58--------->ARR11(3)              ---------->DOF2 --------->RAP2.6(2)          --------->At4g35610   ttttcagataatgatcacgcgcttggtaactcgatagagatttgtaaagatgaatctaagccgcatcaatgtcttgatgagaattgggaagatgcagagc  1162900                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------       --------->LBD16                                                                      ---------      <---------HSFB2a(2)                                                               ---------->DOF2      --------->LBD16                                                                  <------NtERF2      --------->HSFB2a(2)                                     ----------->GT1         --------->LBD16     <---------LBD16                                --------->CCA1(2)                 <------NtERF2  <-----------HVH21                               --------->YAB1                     --------->RAP2.6(2) ------>MYB52(1)                        <-------GAMYB        --------->ALFIN1       <---------LBD16<- ------->DOF2                    --------->ALFIN1<---------YAB1                    ------>NtERF2   --   taaaggtcccggaaaatgggaagaacaacaacaatgtgtgtgagttgttctatgatacaagaagtggtgaagaatgggagaatgaggccggaaagaaagt  1163000  Previous    Next  AGI:  At2g03810.1    Description:  18S pre-ribosomal assembly protein gar2-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13650.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13650.2); similar to unknown [Populus trichocarpa] (GB:ABK93067.1) Range:  from: 1162520    to: 1164570    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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