Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ARR14(2)                                       <---------ARR14(2)                             --------->ANAC55(2)                                     --------->LBD16                                  --------->ANAC58                                    --------->ANAC55(2)                               --------->ANAC55(1)                                    <---------ANAC55(2)                               <---------ANAC55(2)                                   <---------LBD16                                    ----------->GT1                               ----------->HVH21                                      --------->ANAC58               --------->AHL20(2) <---------ANAC46                   <-----------GT1  --------->ANAC46           ----------->GT1     --------->ALFIN1       --------->TOE2(3)          <---------ICU4     -   atctcatgaaaacaagtttaaattttcttagaagtgatgcggaacctattactaaaccatagtgtatcaaatttctatactaaaaatcacgtaaaaacta  1143600                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                     <---------ARR14(2)                   --------->ARR14(2)     --------->YAB1       --------->YAB1                                  <---------ARR14(2)  <---------CCA1(2)----------->GT1   --------->ARR14(2)                   <---------AGP1 -------->YAB1<---------YAB1<---------YAB1<<<<<<<<<MYB98                 <---------CCA1(2)     ------   aatcatatcatcgtttatgaattgtttatcatcttagagtatatgttaaaagttttattcgaccgatgtctatgtagatctcaagtatgtccaaacaaaa  1143700                                                              <-------GAMYB                                                              ----------->RAV1(2)                                                              <---------At4g35610                                                              --------->ATERF1(1)                                                              --------->ZAT2                                                              <---------ZAT2                                                              --------->At4g35610                                                             <---------MYB46(3)                                                             <---------ERF1                                                             ------>NtERF2                                                             <---------ATERF1(1)                                                             <---------DEAR3(2)                                                             <---------RAP2.3(1)                                                            <---------RAP2.3(2)                                       --------->MYB52(2)   <---------RAP2.3(3)                                   <------MYB83             <---------RAP2.6(2)                  <---                                   <------MYB46(1)          <---------DEAR3(1)                   ----                                   <---------ANAC46        --------->RAP2.6(3)                  <----                                  <---------MYB46(3)     --------->ANAC46                       -----                                  --------->MYB52(2)    <---------LBD16                     ---------                                <---------MYB52(1)      <---------At5g28300                 <-------TEIL                               <---------SPL7 --------->ANAC46<------NtERF2              <---------ANAC46                              <---------MYB46(3)   <---------DAG2                       <---------AtMYB61                   ----------------->AGL1  -------->P ----------->HVH21              <----------CDC5                 --------->ANAC46 --------->MYB46(2) <-----------HVH21              --------->At4g35610                 --------->ANAC58 <---------DEAR3(1)<----------DOF2                 <---------At4g35610 ---->DOF2       --------->ANAC58--------->SPL7 <---------ALFIN1                   <---------ANAC46   agacttacgaggcatcatcaagccatttggggtcgttcggtgagttaccagcacctttcacggcggctgagacccatgacttcttgcgctgaggtgcaat  1143800                                                                                      ---------->DOF2                                                                                    ------>MYB46(1)                                            <----------DOF2                         ------>MYB83                                          ------>NtERF2                           ------->GAMYB                                          <---------At4g35610                   ------>MYB83                                         --------->DEAR3(1)                     --------->ANAC46                                       ------->GAMYB                            --------->ANAC58                                      --------->ANAC46                          --------->ANAC58                                      --------->DEAR3(1)                        ------>MYB46(1)                                    ------>NtERF2                               >>>>>>>>>MYB98                                    <---------ATERF1(1)                         -------->P                                ------->GAMYB                                  ------>MYB83        --                                --------->ANAC46                               ------>MYB46(1)    <--                                --------->DREB2C(2)                           <---------ALFIN1   <---                                --------->RAP2.6(2)                          --------->MYB46(3)------                     --------->YAB1--------->DEAR3(1)                        <---------MYB59   <----- ------ICU4       <----------DOF2------>NtERF2                              --------->ANAC58  <------ ----->YAB1--------->LBD16      --------->DEAR3(1)         <---------ATHB12 --------->ANAC58  ------- -----ATHB12------>NtERF2      --------->MYB46(3)       <---------ALFIN1  <------ZmHOX2a(1)   ------- ---->ICU4 ------>NtERF2      <---------ATERF1(1)      <---------ZAT14    =========================== >ZAT18  <---------LBD16     <---------ALFIN1         ------>NtERF2   --------->TOE1(2)       <------   gatcacattcttccggccaactttcatagctccaccgccaacgccgcttctcttgcctccactgatcaagaacgaaggacccaacccactaagcacagct  1143900    <------ZmHOX2a(2)   <---------ARR14(2)   --------->ARR14(2)  --------->GLK1(1) ------->LBD16 -------ANAC46 ------LBD16 --->ARR14(2) ----ARR14(2)            --------->AHL20(2)                   ---------->DOF2 ---ZAT2                 <---------AHL20(2)              ---------->DOF2             *TSS          <- -->ZAT2             ----------->GT1                   --------->YAB1               <---------ARR14(2) -->At4g35610       <---------ARR11(3)           --------->YAB1                    <------ZmHOX2a(1) ==========HOX2a_HOX2a----------->GT1           --------->At4g35610        <---------MYB46(3)      -- ---At4g35610       --------->ARR11(3)          <---------At4g35610     ------------>MYB.PH3(2)  <---   ccggagatcgacatctctctaagatgtttaaatgtgtgtttttgggagtaagcagaatcaaaaggaaagagtttagtttgttagaggaaccaagtgagtc  1144000                                                                                 <---------ZAT18                                                                                 --------->ZAT18                                                                               <-------PIF5                                                                               ------->PIF5                                                                               <-------MYC4                                                                               <-------MYC2                                                                               ------->MYC4                                                                               ------->MYC2                                                                               <-------MYC3                                                                               ------->MYC3                                                                              <--------ABF1                                                                              <---------TGA1a                                                                              ======================bZIP_DOF                                                                              --------->O2                                                                              <---------ANAC55(2)                                                                              <---------ANAC46                                                                              --------->TGA1a                          --------->ANAC55(2)                                ------>NtERF2                          <---------bZIP60(1)                               <---------ALFIN1                <-----------RAV1(2)                                       <-----------------PIF3(1)              --------->TOE1(2)                        <----------DOF2   --------->ANAC58           <---------ARR14(2)                          =================================bZIP_DOF           --------->ARR14(2)                       <---------ARR14(2)   --------->ANAC58          <------ZmHOX2a(1)                         --------->ARR14(2)   --------->ANAC46        <---------TOE2(3) <---------ANAC46          <---------ARR11(3) <---------ANAC58            --        --------->ANAC46  ----------->GT1           --------->ARR11(3) <---------ANAC58         -----   <---------AHL20(2)     <---------ANAC55(2)       --------->GLK1(2) <---------ZAT2     <-----------   --------->AHL20(2)   <---------TGA2(2)          <---------GLK1(2)  --------->At4g35610<----------DOF2  ===================================================================================================  <---------------AGL15----------->TGA1         --------->YAB1        <---------At4g35610<---------DAG2 --------AHL20(2)      ----------->HVH21       <---------ATHB12       --------->ZAT2     ============ ------->AHL20(2)    --------->At4g35610   ------------>CBF <---------MYB52(1)<---------O2      ----- -------DOF2  --------->TOE2(3)            --------->MYB46(3) --------->MYB52(2) --------->ZAT14-----   tttaatttataaggaacctcagaggctgacgtaaattagtttctaaccaatgagaatcttttgttagttcgtagctcgccacgtgtactcgcttttacaa  1144100        <---------At4g35610        --------->At4g35610        <------NtERF2      --------->SPL7      --------->ZAT18    <-----------HVH21   --------->ANAC58   --------->TGA1a                             <---------ANAC58   --------->ANAC58                            <---------ANAC58   --------->ANAC46                           --------->ATHB12   <---------TGA1a                           --------->ICU4 <---------ALFIN1                            <---------YAB1 ------->CCA1(2)                   <---------AHL20(2) ---->ANAC58                   --------->AHL20(2) ----AGL15                    <---------AHL20(2) ====MADS_MADS                <---------AHL20(1) ============bZIP_DOF         --------->AHL20(2)                          --------->ARR11(3) ---->ANAC46                  --------->AHL20(1)                 <---------YAB1 ---->ANAC58 --------->MYB46(3)<---------AHL20(2)              --------->YAB1                  <-----   gaaacacgtccgctaacaacttgcaagagaaatttatttaagttgtcatgcttggaagaaaacactgatcatttaagaactagtatgcgatttcaacatg  1144200                                                                                              -------                                                                                              <------            --------->ARR14(2)                                                                <------            <---------ARR14(2)          ---------->DOF2                                       -------            --------->GLK1(2)      --------->ICU4                                    ---------->DOF2            <---------ARR11(3)     ----------->GT1                  <---------AHL20(2)        -------           <---------GLK1(2)     <---------bZIP60(2)                --------->AHL20(2)       <-------    --------->DAG2        ---------->DOF2                       ----------->GT1      ================   ---------->DOF2  <---------------AtSPL8                     <------ZmHOX2a(1)  <------ZmHOX2a(1) ----REM1(1)--------->ARR11(3)----------->HVH21         ---------->DOF2          <----------ID1   tagcctaaagtgagaatctttataagtacaaagtgacatgtttaaagcaaattgaaccaaaaggaggagtttaatttgtaagaaggacaaagtgagaatc  1144300                            <---------AHL20(2)                    --------->TGA1a                    --------->O2                    <---------ANAC58                    ===================================================bZIP_DOF                    <---------bZIP60(2)                    <---------O2                      --------->bZIP60(1)        --------->TOE2(3)  --------->AHL20(2)      <---------ATHB12      ------->TEIL  <---------TGA1a            --------->MYB46(3) ---------->DOF2    <---------ANAC46          --------->ANAC46 =============================bZIP_DOF        --------->ANAC58 -->ARR14(2)        <---------ANAC58          --------->ANAC58 ---ARR11(3)      <---------TGA2(2)       --------->YAB1           ----------->GT1 ---ARR14(2)     ----------->TGA1         <-----------GT1   --------------->AGL15 -->ARR11(3)     ----------->HVH21     --------->YAB1 <---------TGA2(1)                             - -->GLK1(2)    --------->At4g35610     <---------ICU4 <---------bZIP60(1)                   <-------- --GLK1(2)<-----------RAV1(2)         <---------YAB1  --------->TGA2(1)                     <-------- =============================bZIP_DOF<---------AHL20(2)    <----------DOF2          ----------->HVH21   tttgaaagtacctcagaggctgacgtggattaatttgtttataattacaaccaatgacatcactttgtttagttaaaattcagaggtttgacatgcttgc  1144400                                                                  --------->ANAC55(2)   ------>ZmHOX2a(1) <---------KAN4(2)                                    --------->WRKY18(1)            ------>MYB46(1) -------->YAB1                         <---------TOE2(3)      <-----------HVH21      ------>MYB83   - -ANAC58                               <---------YAB1<-----------HVH21       ------>ZmHOX2a(1)   ---- -ANAC58     --------->ZAT6<----------DOF2      ---------->DOF2----------->HVH21 --------->ARR11(3)<-   aagaataaacaactaagactataaaacaactttgtgtgattaagtttgataaaagggtcatgccggtcacatgttactcctaataccttcctctatggat  1144500  Previous    Next  AGI:  At2g03740.1    Description:  late embryogenesis abundant domain-containing protein / LEA domain-containing protein. similar to late embryogenesis abundant domain-containing protein / LEA domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G03850.1); similar to cold response protein [Thellungiella salsuginea] (GB:ABX79675.1); contains InterPro domain Late embryogenesis abundant protein (InterPro:IPR004238) Range:  from: 1142722    to: 1143985    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version