Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------YAB1                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                         --------->ARR14(2)                           <------NtERF2               --------->ANAC58                                   <-----------HVH21               --------->ANAC58                                  <-----------RAV1(1)    <---------LBD16         <------ZmHOX2a(2)                                       ----------->HVH21<---------ANAC58        --------->ARR11(3)                         <---------TOE1(2) <---------LBD16   <---------LBD16        <---------ARR11(3)            <---------ICU4   <-------TEIL <---------ANAC46   ------>ZmHOX2a(1) ------->GLK1(2)         <---------ARR14(2)<---------YAB1      --------->At4g35610<---------ANAC58   gaatatagaagatcatcaagaaaaacatatacacttctcatcagtatgcttcttatgttcatagtcgctgtcgcggttcttatggcttcctcgggacata  1096700                                             ------>ZmHOX2a(2)                                             <-------TEIL                                            <------ZmHOX2a(2)                                           --------->ARR14(2)                                           <---------ARR14(2)                                          <------ZmHOX2a(1)  <-----------GT1   ----------->RAV1(1)                                      ---------->DOF2     ----------->GT1    <------NtERF2   <-------   gaaaatgaaattcactgaaacttcttcaagttaaactgctaaaaggatccattgaaggaagagttacttcaccaatggctgcaacatgttcaagtctttg  1096800                           <------MYB83                                 <----------DOF2                       <-----------RAV1(1)                   <---------ANAC46          ---------->DOF2  <---------MYB46(3)                <---------ANAC58      <-----------GT1<----------DOF2                         <---------ANAC58             ---------->DOF2 ---DOF2--------->MYB46(3) <------MYB46(1)  <----------DOF2 <---------MYB46(3)    --------->ANAC46   tttatatttaaccaaagtgttttctttgttggtttctgtcttagggctttgctaacaacaattggttgtattgtctttgtttacacatcagagaaagaaa  1096900                                                                      <---------GLK1(1)                                                                      --------->At4g35610                                                                      <---------At4g35610                                                                     --------->ARR14(2)                                                                     <---------AGP1                                                                     <---------ARR14(2)                                                               ------->TEIL                                                               --------->GLK1(2)                                                               <---------ARR14(2)                                  --------->HSFB2a(2)          --------->ARR14(2)                                  <---------HSFB2a(2)         <---------GLK1(2)--------->YAB1                               <---------AHL20(2)           ------>ZmHOX2a(1) <---------ATHB12                           --------->AHL20(2)               --------->LBD16 --------->WOX13(1)                           <---------AHL20(2)               ==================HOX2a_HOX2a                          <---------AHL20(2)               <-----------------AGL3                       --------->AHL20(2)                  <-----------------AGL2                       <---------AHL20(2)       <---------MYB52(2)   <---------ARR11(3)                      --------->AHL20(2)        <------------MYB.PH3(2)------>ZmHOX2a(2)   actatagtttatggcaacttgagatttatttattttatagaaaatgggaaactaacttcttcctgaatctggatctgccaatcaaatgagagactaagtt  1097000                                                                 ----------->GT1                                                                <---------TOE1(3)               <---------MYB52(1)                               --------->DAG2             <-----------RAV1(1)               <----------ID1   --------->MYB59--------->ANAC58          <---------ARR14(2)            ---------->DOF2         <---------TOE2(3)          ------->TEIL            ---------->DOF2           --------->YAB1     --------->ANAC46    *TSS          --------->ARR14(2)    ------>ZmHOX2a(1)        <----------DOF2       --------->ANAC58 -----         <---------CCA1(2)     --------->TOE2(3)    ---------->DOF2       <----------DOF2------------   ttttttcttctgtatctgttgttctctggtcttcctcaaagtcaaagttaagacaaaagctttaataaggtaatctctttcaagaaacctagtcaatagg  1097100                                              --------->YAB1                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  <---------ARR14(3)        <---------ZAT6                                  --------->ARR14(3)    <---------ANAC58   <---------AHL20(2)             --------->AGP1        <---------ANAC58      --------->HSFB2a(1)  --------->AHL20(2)              <---------ARR14(2)    <---------ANAC46      <---------HSFB2a(1)  --------->AHL20(1)              --------->ARR11(3)<-------MYC3             ------->TEIL  <---------AHL20(2)              <---------ARR11(3)------->MYC3        ---------->DOF2 ------>GT1    <---------TOE1(3)  --------->ARR14(2)<-------MYC2 <---------TOE1(3) >CBF          <---------TOE2(3) <---------GLK1(1)  ------->MYC2 <---------TOE2(3)                 <-   gaaatttaatggaatataaggtttgagttttatagagatcttcttgtatcagcatgtgtcttgtgttaatgttctaaagaacctttcttaagacaactag  1097200                            --------->YAB1                                      <---------AHL20(2)                           <---------YAB1                                <------MYB46(1)                         --------->CCA1(2)                               ----------->GT1                       --------->YAB1                  <----------DOF2   <------MYB83                      <---------ATHB12            <----------DOF2    <---------ARR14(2)       -------                  <------ZmHOX2a(2)     <-----------ARR10            --------->ARR14(2)    ------->TEIL                 <---------ARR11(3)     --------->GLK1(2)        --------->ALFIN1   --------->AHL20(2) ------TEIL      --------->ARR11(3)    <---------GLK1(2)       <---------ANAC46--------->AHL20(2)   cttcatttttatcacgagagatcaatgatatgataacagaagaatctcacttctttactttgatgcagtgggatttggtgattttataaaatgtatgtga  1097300                                                                     <---------YAB1                                                                   <---------ICU4                                                                   --------->YAB1                                                                  <---------ATHB12                  <---------ATHB12                                --------->ICU4                --------->WOX13(1)                              --------->WOX13(1)               --------->MYB46(3)                             <------NtERF2               --------->At5g28300              <---------KAN4(2)                              --------->ANAC58          <---------LBD16     ---------->DOF2                                  <---------bZIP60(2)        ---------->DOF2    - ---->HVH21 <------ZmHOX2a(1)           <---------At4g35610  --------->ANAC58  ------->GAMYB       --   tagagagcaaaggaggaacaatcacttgtatgctcttggctctgctcttcttagggacatggccagcaatcatgactctaaccgaaagacgcggtagact  1097400                                                                                                    <                                                   --------->YAB1                               <----                                                  <---------YAB1                            <<<<<<<<<SARD1                                                --------->YAB1                              <<<<<<<<<CBP60g                                        <---------At4g35610                                ------>MYB83                                        --------->At4g35610                                ------>MYB46(1)                                        <---------ZAT2  <---------ANAC58                 <---------MYB59                    --------->ZAT14    --------->MYB52(2)     --------->ZAT6       --------->ZAT2   - ----->ZmHOX2a(1)   <---------REM1(2)<---------MYB52(1) <---------ANAC58          --------->ANAC46 <- ------->TOE2(3)    <---------ZAT14 <-----------HVH21   <---------ANAC46          --------->AtLEC2---   tcctcaacatacttatcttgactacacactgacaaacctgttagctgcagttatcatagcgtttacactaggcgaaataagtccaagcagaccaaatttc  1097500              --------->TGA1a              =============MYC_MYB       =================bZIP_DOF       <----------DOF2     <---------At4g35610     --------->ZAT2     --------->At4g35610 <---------ALFIN1                                              --------->AtLEC2 --------->ANAC46                                   <------MYB83 ---------ZAT14                                     <------MYB46(1) -------GT1   --------->ANAC58                      <---------MYB46(3)                 --------->ATHB12 -------->ZAT14             <-------TEIL        <-----------RAV1(1)                   <---------YAB1 --------ALFIN1    <-------GAMYB --------->YAB1 <---------MYB46(3)                  <------ZmHOX2a(1) ------>ANAC46--------->ANAC58  <-------TEIL <-----------RAV1(1)             <-----------HVH21 <-----   accacacagctttctcaagtcagttacacatacattcatacacatatttgttgttggtttttgaaatgcaaagtttttttgtcacaggataattggccgt  1097600  Previous    Next  AGI:  At2g03590.1    Description:  ATUPS1 (Arabidopsis thaliana ureide permease 1); allantoin uptake transmembrane transporter. Identical to Ureide permease 1 (UPS1) [Arabidopsis Thaliana] (GB:Q9ZPR7); similar to UPS2 (UREIDE PERMEASE 2) [Arabidopsis thaliana] (TAIR:AT2G03530.1); similar to UPS2 (UREIDE PERMEASE 2) [Arabidopsis thaliana] (TAIR:AT2G03530.2); similar to Os12g0502800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066832.1); similar to Ureide permease 2, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98643.2); contains InterPro domain Fatty acid elongase 3-ketoacyl-CoA synthase 1 (InterPro:IPR009834) Range:  from: 1094754    to: 1096965    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g03600.1    Description:  ATUPS3 (Arabidopsis thaliana ureide permease 3). Identical to Ureide permease 3 (UPS3) [Arabidopsis Thaliana] (GB:Q9ZPR6); similar to ATUPS1 (Arabidopsis thaliana ureide permease 1), allantoin uptake transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G03590.1); similar to allantoin permease [Phaseolus vulgaris] (GB:AAS19930.1); contains InterPro domain Fatty acid elongase 3-ketoacyl-CoA synthase 1 (InterPro:IPR009834) Range:  from: 1097099    to: 1098758    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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